cbtA:Quickview: Difference between revisions

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{{Tab On|Quickview|yeeV}}{{Tab|Gene|yeeV}}{{Tab|Gene Product(s)|yeeV}}{{Tab|Expression|yeeV}}{{Tab|Evolution|yeeV}}{{Tab|On One Page|yeeV}}{{TabsBottom}}
{{Tab On|Quickview|cbtA}}{{Tab|Gene|cbtA}}{{Tab|Gene Product(s)|cbtA}}{{Tab|Expression|cbtA}}{{Tab|Evolution|cbtA}}{{Tab|On One Page|cbtA}}{{TabsBottom}}
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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[yeeV:Gene|''yeeV]]'' (synonyms: ''ECK1998, b2005, JW1987'')<ref name='LIB:Riley_2006'/>
''cbtA''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[yeeV:Gene_Product(s)|YeeV product]]<ref name='LIB:Riley_2006'/>: CP4-44 prophage; toxin of the YeeV-YeeU toxin-antitoxin system product, B2005 product
''ECK1998, b2005, JW1987''<ref name='LIB:Riley_2006'/>, yeeV, JW1987''
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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toxin of the YeeV-YeeU toxin-antitoxin pair<ref name='LIB:EcoCyc10.6'/> CP4-44 prophage; toxin of the YeeV-YeeU toxin-antitoxin system<ref name='LIB:EcoCyc11.1'/>  
toxin of the YeeV-YeeU toxin-antitoxin pair<ref name='LIB:EcoCyc10.6'/>; CP4-44 prophage; toxin of the YeeV-YeeU toxin-antitoxin system<ref name='LIB:EcoCyc11.1'/>


Toxin component of toxin-antitoxin protein pair YeeV-YeeU; CP4-44 putative defective prophage<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''CP4-44 prophage; toxin of the YeeV-YeeU toxin-antitoxin system<ref name='LIB:Riley_2006'/>, B2005<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YeeV<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , CbtA, ECK1998, JW1987, b2005''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:yeeR|yeeR]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:yeeR|yeeR]]<ref name='LIB:EcoCyc10.6'/>  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=cbtA&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G7085]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120003671&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=cbtA&loc=MG1655%3A2075593..2075967,W3110%3A2079706..2080080,DH10B%3A2166601..2166975,REL606%3A3009295..3009669,BW2952%3A1968076..1968450]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1968076&end=1968450&gene=cbtA&aa=mktlpvlpgqaassrpspveiwqillsrlldqhygltlndtpfadervieqhieagislcdavnflvekyalvrtdqpgfsactrsqlinsidilrarratglmtrdnyrtvnnitlgkypeak]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=cbtA+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=cbtA]]&nbsp;&nbsp;
 
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===Notes===
===Notes===
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ykfI, ypjF and yeeV are paralogs. Overexpression of YeeV inhibits growth (Brown, 2003).<ref name='LIB:EcoGene'/>




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==References==
==References==
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Latest revision as of 21:42, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

cbtA

Gene Synonym(s)

ECK1998, b2005, JW1987[1], yeeV, JW1987

Product Desc.

toxin of the YeeV-YeeU toxin-antitoxin pair[2]; CP4-44 prophage; toxin of the YeeV-YeeU toxin-antitoxin system[3]

Toxin component of toxin-antitoxin protein pair YeeV-YeeU; CP4-44 putative defective prophage[4]

Product Synonyms(s)

CP4-44 prophage; toxin of the YeeV-YeeU toxin-antitoxin system[1], B2005[2][1], YeeV[2][1] , CbtA, ECK1998, JW1987, b2005

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): yeeR[2]

Regulation/Activity
Quick Links



        

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See Help:Quickview for help with entering information in the Quickview table.

Notes

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ykfI, ypjF and yeeV are paralogs. Overexpression of YeeV inhibits growth (Brown, 2003).[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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