ygeG:Quickview: Difference between revisions

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!align=left {{table_heading_style}} |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''ygeG''  
''ygeG''
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK2849, b2851, JW2819''<ref name='LIB:Riley_2006'/>
''ECK2849, b2851, JW2819''<ref name='LIB:Riley_2006'/>, JW2819''
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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predicted chaperone<ref name='LIB:Riley_2006'/>, B2851<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YgeG<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''predicted chaperone<ref name='LIB:Riley_2006'/>, B2851<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YgeG<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK2849, JW2819, b2851''
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!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
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!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=ygeG&loc=MG1655:2989290..2989781,W3110:2989924..2990415,DH10B:3083160..3083651 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3083160&end=3083651&gene=ygeG&aa=mstetieifnnsdewanqlkhalskgenlallhgltpdildriyayafdyhekgnitdaeiyykflciyafenheylkdfasvcqpkkkyqqaydlyklsynyfpyddysviyrmgqcqigaknidnamqcfyhiinnceddsvkskaqayiellndnsedng Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ygeG+AND+escherichia+coli Pubmed(ygeG)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=ygeG Textpresso(ygeG)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=ygeG&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G7471]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120004034&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=ygeG&loc=MG1655%3A2989290..2989781,W3110%3A2989924..2990415,DH10B%3A3083160..3083651,BW2952%3A2876438..2876929]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2876438&end=2876929&gene=ygeG&aa=mstetieifnnsdewanqlkhalskgenlallhgltpdildriyayafdyhekgnitdaeiyykflciyafenheylkdfasvcqpkkkyqqaydlyklsynyfpyddysviyrmgqcqigaknidnamqcfyhiinnceddsvkskaqayiellndnsedng]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ygeG+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=ygeG]]&nbsp;&nbsp;


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Latest revision as of 21:41, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

ygeG

Gene Synonym(s)

ECK2849, b2851, JW2819[1], JW2819

Product Desc.

predicted chaperone[2][3]

Putative secretion chaperone, part of T3SS PAI ETT2 remnant[4]

Product Synonyms(s)

predicted chaperone[1], B2851[2][1], YgeG[2][1] , ECK2849, JW2819, b2851

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): ygeG[2]

Regulation/Activity
Quick Links



        

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Notes

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This gene is a remnant of the type three secretion system (T3SS) pathogenicity island ETT2. 18 kb of ETT2 has been deleted from K-12, leaving 10 kb of the presumably non-functional T3SS ETT2 remaining. YgeG is homolgous to secretion-associated chaperones SicA (Salmonella), SycD (Yersinia) and IpgC (Shigella).[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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