ykfI:Quickview: Difference between revisions
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!{{table_heading_style}} | | !align=left {{table_heading_style}} |Standard Name | ||
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''ykfI'' | |||
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!{{table_heading_style}} | | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK0246, b0245, JW0234''<ref name='LIB:Riley_2006'/>, JW0234'' | |||
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!{{table_heading_style}} | | !align=left {{table_heading_style}} |Product Desc. | ||
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toxin of the YkfI-YafW toxin-antitoxin pair<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | toxin of the YkfI-YafW toxin-antitoxin pair<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ||
Toxin component of toxin-antitoxin protein pair YkfI-YafW; CP4-6 prophage<ref name='LIB:EcoGene'/> | |||
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!align=left {{table_heading_style}} |Product Synonyms(s) | |||
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''CP4-6 prophage; toxin of the YkfI-YafW toxin-antitoxin system<ref name='LIB:Riley_2006'/>, B0245<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YkfI<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK0246, JW0234, b0245'' | |||
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!align=left {{table_heading_style}} |Function from GO | |||
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<GO_nr /> | |||
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!{{table_heading_style}} |Knock-Out Phenotype | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!{{table_heading_style}} |Regulation/Expression | !align=left {{table_heading_style}} |Regulation/Expression | ||
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transcription unit(s): [[:Category:Txn_unit:ykfI|ykfI]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:ykfI|ykfI]]<ref name='LIB:EcoCyc10.6'/> | ||
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!{{table_heading_style}} |Regulation/Activity | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=ykfI&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G6120]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120002740&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=ykfI&loc=MG1655%3A262893..262552,W3110%3A262893..262552,DH10B%3A236997..236656,BW2952%3A262551..262892]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=262551&end=262892&gene=ykfI&aa=mktlpaitqravkpclspvavwqmlltrlleqhygltindtpfcneavikehidagitladavnflvekyelvridrkgfswqeqspylraadilrarqatgllrqsrnnvvr]] [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ykfI+AND+escherichia+coli]] [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=ykfI]] | |||
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<protect><!--Quickview_notes--></protect> | <protect><!--Quickview_notes--></protect> | ||
===Notes=== | ===Notes=== | ||
{{BacktoTop}} | {{BacktoTop}} | ||
ykfI, ypjF and yeeV are paralogs. YkfI overexpression inhibits growth (Brown, 2003).<ref name='LIB:EcoGene'/> | |||
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==References== | ==References== | ||
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Latest revision as of 21:40, 27 May 2013
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
| Standard Name |
ykfI |
|---|---|
| Gene Synonym(s) |
ECK0246, b0245, JW0234[1], JW0234 |
| Product Desc. |
toxin of the YkfI-YafW toxin-antitoxin pair[2][3] Toxin component of toxin-antitoxin protein pair YkfI-YafW; CP4-6 prophage[4] |
| Product Synonyms(s) |
CP4-6 prophage; toxin of the YkfI-YafW toxin-antitoxin system[1], B0245[2][1], YkfI[2][1] , ECK0246, JW0234, b0245 |
| Function from GO |
<GO_nr /> |
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links |
|
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
ykfI, ypjF and yeeV are paralogs. YkfI overexpression inhibits growth (Brown, 2003).[4]
References
- ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.