ykfI:Quickview: Difference between revisions

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!align=left {{table_heading_style}} |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''ykfI''  
''ykfI''
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK0246, b0245, JW0234''<ref name='LIB:Riley_2006'/>
''ECK0246, b0245, JW0234''<ref name='LIB:Riley_2006'/>, JW0234''
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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CP4-6 prophage; toxin of the YkfI-YafW toxin-antitoxin system<ref name='LIB:Riley_2006'/>, B0245<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YkfI<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''CP4-6 prophage; toxin of the YkfI-YafW toxin-antitoxin system<ref name='LIB:Riley_2006'/>, B0245<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YkfI<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK0246, JW0234, b0245''
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!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
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!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=ykfI&loc=MG1655:262893..262552,W3110:262893..262552,DH10B:236997..236656 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=236997&end=236656&gene=ykfI&aa=mktlpaitqravkpclspvavwqmlltrlleqhygltindtpfcneavikehidagitladavnflvekyelvridrkgfswqeqspylraadilrarqatgllrqsrnnvvr Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ykfI+AND+escherichia+coli Pubmed(ykfI)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=ykfI Textpresso(ykfI)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=ykfI&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G6120]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120002740&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=ykfI&loc=MG1655%3A262893..262552,W3110%3A262893..262552,DH10B%3A236997..236656,BW2952%3A262551..262892]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=262551&end=262892&gene=ykfI&aa=mktlpaitqravkpclspvavwqmlltrlleqhygltindtpfcneavikehidagitladavnflvekyelvridrkgfswqeqspylraadilrarqatgllrqsrnnvvr]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ykfI+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=ykfI]]&nbsp;&nbsp;


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Latest revision as of 21:40, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

ykfI

Gene Synonym(s)

ECK0246, b0245, JW0234[1], JW0234

Product Desc.

toxin of the YkfI-YafW toxin-antitoxin pair[2][3]

Toxin component of toxin-antitoxin protein pair YkfI-YafW; CP4-6 prophage[4]

Product Synonyms(s)

CP4-6 prophage; toxin of the YkfI-YafW toxin-antitoxin system[1], B0245[2][1], YkfI[2][1] , ECK0246, JW0234, b0245

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): ykfI[2]

Regulation/Activity
Quick Links



        

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See Help:Quickview for help with entering information in the Quickview table.

Notes

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ykfI, ypjF and yeeV are paralogs. YkfI overexpression inhibits growth (Brown, 2003).[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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