rplI:Evolution: Difference between revisions

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{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="Z46ac1a1635cf3"  class=" tableEdit Evolution_homologs_table"   
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!|Organism!!Homologs (Statistics)!!Comments
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!|Database!!Accession!!Notes
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[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])  
[http://www.pantherdb.org/ Panther] ([[Panther|EcoliWiki Page]])
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[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF01281 PFAM:PF01281]
[http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21368:SF20 PTHR21368:SF20]
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=55653 SUPERFAMILY:55653]
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=55658 SUPERFAMILY:55658]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF03948 PF03948  Ribosomal protein L9, C-terminal domain]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF01281 PF01281  Ribosomal protein L9, N-terminal domain]
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[[EcoCyc]]
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EcoCyc:EG10870
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG10870
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120000861
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB0863
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0013746
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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Latest revision as of 08:38, 27 May 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Arabidopsis thaliana

  • AT3G44890 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000271707 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Oryza gramene

  • Q6KA00 (score: 1.000; bootstrap: 100%)
  • Q8L803 (score: 0.807)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000002210 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000028316 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000028794 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Shigella flexneri

RPLI

From SHIGELLACYC

E. coli O157

RPLI

From ECOO157CYC

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Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Panther (EcoliWiki Page)

PTHR21368:SF20

Superfamily (EcoliWiki Page)

SUPERFAMILY:55653

Superfamily (EcoliWiki Page)

SUPERFAMILY:55658

Pfam (EcoliWiki Page)

PF03948 Ribosomal protein L9, C-terminal domain

Pfam (EcoliWiki Page)

PF01281 Ribosomal protein L9, N-terminal domain

EcoCyc

EcoCyc:EG10870

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10870

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000861

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0863

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0013746

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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