ulaF:Evolution: Difference between revisions

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!|Database!!Accession!!Notes
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[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])  
[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF00596 PFAM:PF00596]
[http://pfam.janelia.org/family/PF00596 PF00596 Class II Aldolase and Adducin N-terminal domain]
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[http://www.pantherdb.org/ Panther] ([[Panther|EcoliWiki Page]])
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[http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22789:SF0 PTHR22789:SF0]
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=53639 SUPERFAMILY:53639]
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[[EcoCyc]]
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EcoCyc:G7860
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG12498
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120004355
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB2391
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0013734
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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Latest revision as of 08:38, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Apis mellifera

  • ENSAPMP00000012633 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000028152 (score: 1.000; bootstrap: 100%)
  • ENSBTAP00000004231 (score: 0.419)
  • ENSBTAP00000011966 (score: 0.390)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000021828 (score: 1.000; bootstrap: 100%)
  • ENSCAFP00000015741 (score: 0.400)
  • ENSCAFP00000005087 (score: 0.366)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000025213 (score: 1.000; bootstrap: 100%)
  • ENSGALP00000013902 (score: 0.395)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000264758 (score: 1.000; bootstrap: 100%)
  • ENSP00000348381 (score: 0.418)
  • ENSP00000264436 (score: 0.376)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000010988 (score: 1.000; bootstrap: 100%)
  • ENSMMUP00000013882 (score: 0.333)
  • ENSMMUP00000008196 (score: 0.240)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000004673 (score: 1.000; bootstrap: 100%)
  • ENSMODP00000013307 (score: 0.461)
  • ENSMODP00000014253 (score: 0.427)

From Inparanoid:20070104

Mus musculus

  • MGI:87918 (score: 1.000; bootstrap: 100%)
  • MGI:1351615 (score: 0.445)
  • MGI:87919 (score: 0.413)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000027304 (score: 1.000; bootstrap: 100%)
  • ENSPTRP00000020655 (score: 0.376)
  • ENSPTRP00000042709 (score: 0.339)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000018072 (score: 1.000; bootstrap: 100%)
  • ENSRNOP00000043399 (score: 0.449)
  • ENSRNOP00000021491 (score: 0.414)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YJR024C (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000177921 (score: 1.000; bootstrap: 100%)
  • NEWSINFRUP00000167802 (score: 0.347)
  • NEWSINFRUP00000158333 (score: 0.320)
  • NEWSINFRUP00000160493 (score: 0.301)
  • NEWSINFRUP00000154131 (score: 0.182)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00024942001 (score: 1.000; bootstrap: 100%)
  • GSTENP00031118001 (score: 1.000; bootstrap: 100%)
  • GSTENP00020027001 (score: 0.494)
  • GSTENP00014406001 (score: 0.320)

From Inparanoid:20070104

Shigella flexneri

SGAE

From SHIGELLACYC

E. coli O157

SGAE

From ECOO157CYC

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Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF00596 Class II Aldolase and Adducin N-terminal domain

Panther (EcoliWiki Page)

PTHR22789:SF0

Superfamily (EcoliWiki Page)

SUPERFAMILY:53639

EcoCyc

EcoCyc:G7860

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG12498

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120004355

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB2391

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0013734

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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