yjeF:Evolution: Difference between revisions

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!|Organism!!Homologs (Statistics)!!Comments
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{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="R46ac18aeddab1"  class=" tableEdit Gene_accessions_table"   
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!|Database!!Accession!!Notes
!|Database!!Accession!!Notes
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[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])  
[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=53613 SUPERFAMILY:53613]
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[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF03853 PFAM:PF03853]
[http://www.pantherdb.org/ Panther] ([[Panther|EcoliWiki Page]])
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[http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12592:SF0 PTHR12592:SF0]
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=53613 SUPERFAMILY:53613]
[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=64153 SUPERFAMILY:64153]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF01256 PF01256  Carbohydrate kinase]
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[http://www.pantherdb.org/ Panther] ([[Panther|EcoliWiki Page]])
[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12592:SF0 PTHR12592:SF0]
[http://pfam.janelia.org/family/PF03853 PF03853  YjeF-related protein N-terminus]
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[[EcoCyc]]
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EcoCyc:EG11758
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG11758
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120001694
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB1708
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0013644
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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Latest revision as of 08:37, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000025898 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000031169 (score: 1.000; bootstrap: 85%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT5G19150 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000035218 (score: 1.000; bootstrap: 56%)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00029031 (score: 1.000; bootstrap: 61%)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00011298 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000009128 (score: 1.000; bootstrap: 54%)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000006335 (score: 1.000; bootstrap: 79%)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-040718-362 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-040718-397 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0189092 (score: 1.000; bootstrap: 78%)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0036848 (score: 1.000; bootstrap: 89%)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA15549-PA (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000027161 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000311984 (score: 1.000; bootstrap: 67%)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000003528 (score: 1.000; bootstrap: 65%)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000005619 (score: 1.000; bootstrap: 73%)

From Inparanoid:20070104

Mus musculus

  • MGI:1913353 (score: 1.000; bootstrap: 66%)

From Inparanoid:20070104

Oryza gramene

  • Q53Q78 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000010257 (score: 1.000; bootstrap: 66%)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000021637 (score: 1.000; bootstrap: 66%)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YKL151C (score: 1.000; bootstrap: 53%)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPCC613 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000153020 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00025998001 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000017993 (score: 1.000; bootstrap: 60%)

From Inparanoid:20070104

Shigella flexneri

YJEF

From SHIGELLACYC

E. coli O157

YJEF

From ECOO157CYC

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Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Superfamily (EcoliWiki Page)

SUPERFAMILY:53613

Panther (EcoliWiki Page)

PTHR12592:SF0

Superfamily (EcoliWiki Page)

SUPERFAMILY:64153

Pfam (EcoliWiki Page)

PF01256 Carbohydrate kinase

Pfam (EcoliWiki Page)

PF03853 YjeF-related protein N-terminus

EcoCyc

EcoCyc:EG11758

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG11758

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120001694

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB1708

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0013644

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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