dinF:Evolution: Difference between revisions

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!Organism!!Homologs (Statistics)!!Comments
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''Arabidopsis thaliana''   
''Arabidopsis thaliana''   
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''Oryza gramene''   
''Oryza gramene''   
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''Shigella flexneri''   
''Shigella flexneri''   
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''E. coli'' O157  
''E. coli'' O157  
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===Do-It-Yourself Web Tools===
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!Database!!Accession!!Notes
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF01554 PF01554  MatE]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF01554 PF01554  MatE]
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[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])  
[http://www.pantherdb.org/ Panther] ([[Panther|EcoliWiki Page]])
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[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF01554 PFAM:PF01554]
[http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11206:SF28 PTHR11206:SF28]
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[[EcoCyc]]
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EcoCyc:EG11491
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG11491
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120001447
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB1454
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0013243
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
 
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===Notes===
===Notes===
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==References==
==References==
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Latest revision as of 08:37, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Arabidopsis thaliana

  • AT2G38330 (score: 1.000; bootstrap: 92%)
  • AT4G38380 (score: 0.340)
  • AT1G51340 (score: 0.320)
  • AT3G08040 (score: 0.279)

From Inparanoid:20070104

Oryza gramene

  • Q5JLN5 (score: 1.000; bootstrap: 100%)
  • Q8S6Q1 (score: 0.460)
  • Q7G442 (score: 0.443)
  • Q8S6V6 (score: 0.378)
  • Q651P2 (score: 0.191)
  • Q6I567 (score: 0.090)

From Inparanoid:20070104

Shigella flexneri

DINF

From SHIGELLACYC

E. coli O157

DINF

From ECOO157CYC

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Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF01554 MatE

Pfam (EcoliWiki Page)

PF01554 MatE

Panther (EcoliWiki Page)

PTHR11206:SF28

EcoCyc

EcoCyc:EG11491

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG11491

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120001447

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB1454

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0013243

Escherichia coli str. K-12 substr. MG1655

edit table


Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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