bioH:Evolution: Difference between revisions

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!|Organism!!Homologs (Statistics)!!Comments
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!|Database!!Accession!!Notes
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[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])  
[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF00561 PFAM:PF00561]
[http://pfam.janelia.org/family/PF00561 PF00561 alpha/beta hydrolase fold]
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[[EcoCyc]]
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EcoCyc:EG10122
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG10122
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120000118
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB0120
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0011136
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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Latest revision as of 08:36, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000026314 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT4G36530 (score: 1.000; bootstrap: 100%)
  • AT5G19850 (score: 0.165)
  • AT5G38520 (score: 0.141)
  • AT5G13800 (score: 0.098)
  • AT4G25290 (score: 0.071)

From Inparanoid:20070104

Oryza gramene

  • Q6YVH6 (score: 1.000; bootstrap: 100%)
  • Q60DW4 (score: 0.139)
  • Q652J5 (score: 0.121)
  • Q69XR3 (score: 0.108)
  • Q69XR2 (score: 0.101)

From Inparanoid:20070104

Shigella flexneri

BIOH

From SHIGELLACYC

E. coli O157

BIOH

From ECOO157CYC

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Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF00561 alpha/beta hydrolase fold

Superfamily (EcoliWiki Page)

SUPERFAMILY:53474

Panther (EcoliWiki Page)

PTHR10992:SF71

EcoCyc

EcoCyc:EG10122

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10122

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000118

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0120

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0011136

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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