rplP:Evolution: Difference between revisions

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!|Database!!Accession!!Notes
!|Database!!Accession!!Notes
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[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])  
[http://www.pantherdb.org/ Panther] ([[Panther|EcoliWiki Page]])
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[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF00252 PFAM:PF00252]
[http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12220:SF13 PTHR12220:SF13]
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=54686 SUPERFAMILY:54686]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF00252 PF00252  Ribosomal protein L16p/L10e]
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[[EcoCyc]]
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EcoCyc:EG10877
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG10877
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120000868
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB0870
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0010846
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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Latest revision as of 08:36, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000011467 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT2G28820 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000028236 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000015168 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-041122-1 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-041122-10 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0201609 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA16000-PA (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000008312 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000300151 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000029383 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000025272 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Mus musculus

  • MGI:2137219 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Oryza gramene

  • P08528 (score: 1.000; bootstrap: 97%)
  • P12138 (score: 1.000; bootstrap: 97%)
  • Q6L3G1 (score: 0.983)
  • Q6ENS6 (score: 0.983)
  • Q6END6 (score: 0.975)
  • Q95H50 (score: 0.907)
  • Q6QXS2 (score: 0.706)
  • Q6QY48 (score: 0.697)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000006376 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000028517 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YBL038W (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPBC11053c (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000021886 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Shigella flexneri

RPLP

From SHIGELLACYC

E. coli O157

RPLP

From ECOO157CYC

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Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Panther (EcoliWiki Page)

PTHR12220:SF13

Superfamily (EcoliWiki Page)

SUPERFAMILY:54686

Pfam (EcoliWiki Page)

PF00252 Ribosomal protein L16p/L10e

EcoCyc

EcoCyc:EG10877

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10877

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000868

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0870

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0010846

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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