gcp:Evolution: Difference between revisions

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!|Organism!!Homologs (Statistics)!!Comments
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!|Database!!Accession!!Notes
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF00814 PF00814  Glycoprotease family]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
[[EcoCyc]]
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EcoCyc:
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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[http://pfam.janelia.org/family/PF00814 PF00814  Glycoprotease family] 
ASAP:
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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Latest revision as of 08:35, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000010411 (score: 1.000; bootstrap: 78%)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000034603 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT2G45270 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000016671 (score: 1.000; bootstrap: 76%)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00032676 (score: 1.000; bootstrap: 67%)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00007237 (score: 1.000; bootstrap: 67%)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000013815 (score: 1.000; bootstrap: 95%)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-030616-532 (score: 1.000; bootstrap: 83%)
  • ZDB-CDNA-051120-5 (score: 1.000; bootstrap: 84%)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0183804 (score: 1.000; bootstrap: 90%)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0031060 (score: 1.000; bootstrap: 70%)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA12844-PA (score: 1.000; bootstrap: 84%)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000003745 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000264151 (score: 1.000; bootstrap: 66%)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000018798 (score: 1.000; bootstrap: 98%)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000014319 (score: 1.000; bootstrap: 78%)

From Inparanoid:20070104

Mus musculus

  • MGI:1919335 (score: 1.000; bootstrap: 79%)

From Inparanoid:20070104

Oryza gramene

  • Q6L4N8 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000021771 (score: 1.000; bootstrap: 65%)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000049478 (score: 1.000; bootstrap: 74%)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YDL104C (score: 1.000; bootstrap: 85%)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPCC12590 (score: 1.000; bootstrap: 76%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000150388 (score: 1.000; bootstrap: 78%)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00029225001 (score: 1.000; bootstrap: 75%)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000050666 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Shigella flexneri

YGJD

From SHIGELLACYC

E. coli O157

YGJD

From ECOO157CYC

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Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF00814 Glycoprotease family

Superfamily (EcoliWiki Page)

SUPERFAMILY:53067

Panther (EcoliWiki Page)

PTHR11735:SF6

EcoCyc

EcoCyc:

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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