yqaE:Evolution: Difference between revisions

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!|Organism!!Homologs (Statistics)!!Comments
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[[EcoCyc]]
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EcoCyc:G7396
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG14313
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120003963
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB4060
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0008770
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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Latest revision as of 08:34, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Arabidopsis thaliana

  • AT3G05880 (score: 1.000; bootstrap: 100%)
  • AT3G05890 (score: 0.768)
  • AT2G38905 (score: 0.714)
  • AT1G57550 (score: 0.446)
  • AT4G30650 (score: 0.286)
  • AT4G30660 (score: 0.268)
  • AT4G28088 (score: 0.232)
  • AT2G24040 (score: 0.232)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00035116 (score: 1.000; bootstrap: 100%)
  • WBGene00035191 (score: 1.000; bootstrap: 100%)
  • WBGene00035190 (score: 0.775)
  • WBGene00035115 (score: 0.775)
  • WBGene00036835 (score: 0.662)
  • WBGene00027510 (score: 0.493)
  • WBGene00036840 (score: 0.437)
  • WBGene00036841 (score: 0.423)
  • WBGene00036836 (score: 0.380)
  • WBGene00024974 (score: 0.225)
  • WBGene00036843 (score: 0.085)
  • WBGene00031471 (score: 0.070)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00020738 (score: 1.000; bootstrap: 100%)
  • WBGene00020736 (score: 0.797)
  • WBGene00020737 (score: 0.710)
  • WBGene00044280 (score: 0.652)
  • WBGene00014017 (score: 0.058)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0231576 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Oryza gramene

  • Q75L88 (score: 1.000; bootstrap: 100%)
  • Q8H001 (score: 0.774)
  • Q9ARD5 (score: 0.698)
  • Q76MV8 (score: 0.679)
  • P68179 (score: 0.679)
  • P68178 (score: 0.679)
  • Q653S2 (score: 0.509)
  • Q9LRI7 (score: 0.509)
  • Q6BDB3 (score: 0.472)
  • Q6BDB2 (score: 0.453)
  • Q5MJ26 (score: 0.453)
  • Q6AT93 (score: 0.434)
  • Q8H5T6 (score: 0.396)
  • Q9FRC5 (score: 0.396)
  • Q5SMN0 (score: 0.377)
  • Q5MJ27 (score: 0.358)
  • Q8H1Z1 (score: 0.321)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPBC7131c (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Shigella flexneri

S2878

From SHIGELLACYC

E. coli O157

Z3965

From ECOO157CYC

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Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Panther (EcoliWiki Page)

PTHR21659:SF0

Pfam (EcoliWiki Page)

PF01679 Uncharacterized protein family UPF0057

EcoCyc

EcoCyc:G7396

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG14313

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120003963

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB4060

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0008770

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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