folC:Evolution: Difference between revisions

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!|Organism!!Homologs (Statistics)!!Comments
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!|Database!!Accession!!Notes
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[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])  
[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF01225 PFAM:PF01225]
[http://pfam.janelia.org/family/PF02875 PF02875  Mur ligase family, glutamate ligase domain]
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=53623 SUPERFAMILY:53623]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF08245 PF08245  Mur ligase middle domain]
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[[EcoCyc]]
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EcoCyc:EG10327
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG10327
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120000321
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB0323
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0007645
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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Latest revision as of 08:34, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000026850 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000025162 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT5G41480 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00017777 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-040426-2781 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-040425-3728 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0030407 (score: 1.000; bootstrap: 100%)
  • FBgn0051773 (score: 0.173)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000259403 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000036574 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YMR113W (score: 1.000; bootstrap: 77%)
  • YKL132C (score: 0.299)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPAC2279 (score: 1.000; bootstrap: 69%)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00000412001 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000050237 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Shigella flexneri

FOLC

From SHIGELLACYC

E. coli O157

FOLC

From ECOO157CYC

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Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF02875 Mur ligase family, glutamate ligase domain

Panther (EcoliWiki Page)

PTHR11136:SF0

Superfamily (EcoliWiki Page)

SUPERFAMILY:53244

Superfamily (EcoliWiki Page)

SUPERFAMILY:53623

Pfam (EcoliWiki Page)

PF08245 Mur ligase middle domain

EcoCyc

EcoCyc:EG10327

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10327

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000321

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0323

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0007645

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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