nupX:Evolution: Difference between revisions

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!|Database!!Accession!!Notes
!|Database!!Accession!!Notes
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[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])  
[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF01773 PFAM:PF01773]
[http://pfam.janelia.org/family/PF01773 PF01773 Na+ dependent nucleoside transporter N-terminus]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF07662 PF07662  Na+ dependent nucleoside transporter C-terminus]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF07670 PF07670  Nucleoside recognition]
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[[EcoCyc]]
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EcoCyc:EG12029
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG12029
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120001946
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB1964
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0007152
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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Latest revision as of 08:33, 27 May 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000023233 (score: 1.000; bootstrap: 97%)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000006349 (score: 1.000; bootstrap: 93%)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000024328 (score: 1.000; bootstrap: 100%)
  • ENSBTAP00000021720 (score: 0.391)
  • ENSBTAP00000038591 (score: 0.391)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00040976 (score: 1.000; bootstrap: 100%)
  • WBGene00040975 (score: 0.676)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00017867 (score: 1.000; bootstrap: 100%)
  • WBGene00017868 (score: 0.634)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000019075 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000007456 (score: 1.000; bootstrap: 99%)
  • ENSCINP00000007491 (score: 0.502)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0025709 (score: 1.000; bootstrap: 100%)
  • FBgn0033371 (score: 0.216)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA20810-PA (score: 1.000; bootstrap: 100%)
  • GA11193-PA (score: 0.217)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000020536 (score: 1.000; bootstrap: 100%)
  • ENSGALP00000003966 (score: 0.301)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000348533 (score: 1.000; bootstrap: 100%)
  • ENSP00000286749 (score: 0.247)
  • ENSP00000315006 (score: 0.247)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000011390 (score: 1.000; bootstrap: 100%)
  • ENSMMUP00000001717 (score: 0.254)
  • ENSMMUP00000022047 (score: 0.195)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000010361 (score: 1.000; bootstrap: 100%)
  • ENSMODP00000022001 (score: 0.283)
  • ENSMODP00000024166 (score: 0.259)
  • ENSMODP00000021999 (score: 0.170)

From Inparanoid:20070104

Mus musculus

  • MGI:2137361 (score: 1.000; bootstrap: 100%)
  • MGI:3605073 (score: 0.257)
  • MGI:1913105 (score: 0.253)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000046380 (score: 1.000; bootstrap: 100%)
  • ENSPTRP00000012022 (score: 0.250)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000025745 (score: 1.000; bootstrap: 100%)
  • ENSRNOP00000025621 (score: 0.258)
  • ENSRNOP00000024658 (score: 0.256)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000127158 (score: 1.000; bootstrap: 100%)
  • NEWSINFRUP00000180211 (score: 0.212)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00011352001 (score: 1.000; bootstrap: 100%)
  • GSTENP00035650001 (score: 0.202)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000025648 (score: 1.000; bootstrap: 100%)
  • ENSXETP00000021617 (score: 0.336)

From Inparanoid:20070104

Shigella flexneri

YEIJ

From SHIGELLACYC

E. coli O157

YEIJ

From ECOO157CYC

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Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF01773 Na+ dependent nucleoside transporter N-terminus

Pfam (EcoliWiki Page)

PF07662 Na+ dependent nucleoside transporter C-terminus

Pfam (EcoliWiki Page)

PF07670 Nucleoside recognition

EcoCyc

EcoCyc:EG12029

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG12029

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120001946

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB1964

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0007152

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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