argS:Evolution: Difference between revisions

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From ECOO157CYC  
From ECOO157CYC  


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!|Database!!Accession!!Notes
!|Database!!Accession!!Notes
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[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])  
[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF03485 PFAM:PF03485]
[http://pfam.janelia.org/family/PF03485 PF03485 Arginyl tRNA synthetase N terminal domain]
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=47323 SUPERFAMILY:47323]
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=52374 SUPERFAMILY:52374]
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[http://www.pantherdb.org/ Panther] ([[Panther|EcoliWiki Page]])
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[http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11956:SF0 PTHR11956:SF0]
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=55190 SUPERFAMILY:55190]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF00750 PF00750  tRNA synthetases class I (R)]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF05746 PF05746  DALR anticodon binding domain]
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[[EcoCyc]]
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EcoCyc:EG10071
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG10071
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120000067
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB0069
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0006264
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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==References==
==References==
{{BacktoTop}}
{{BacktoTop}}
 
{{RefHelp}}
<references/>
<references />
<noinclude>
__NOTOC__
__NOTOC__
</noinclude>
===Categories===
===Categories===
{{BacktoTop}}
{{BacktoTop}}

Latest revision as of 08:33, 27 May 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

[back to top]


See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000017692 (score: 1.000; bootstrap: 49%)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000026325 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT4G26300 (score: 1.000; bootstrap: 100%)
  • AT1G66530 (score: 0.751)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000019475 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00037653 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00004679 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000025127 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000014994 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-030131-9014 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-040425-730 (score: 1.000; bootstrap: 99%)
  • ZDB-CDNA-041010-222 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0231325 (score: 1.000; bootstrap: 68%)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0027093 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA10066-PA (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000002862 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000231572 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000016437 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000009082 (score: 1.000; bootstrap: 99%)
  • ENSMODP00000008974 (score: 0.259)

From Inparanoid:20070104

Mus musculus

  • MGI:1914297 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Oryza gramene

  • Q7F807 (score: 1.000; bootstrap: 100%)
  • Q5ZEM0 (score: 0.791)
  • Q75IR7 (score: 0.663)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000029908 (score: 1.000; bootstrap: 95%)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000010252 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YDR341C (score: 1.000; bootstrap: 100%)
  • YHR091C (score: 0.493)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPBC25B29c (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000151677 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00003981001 (score: 1.000; bootstrap: 99%)
  • GSTENP00014583001 (score: 0.957)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000042855 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Shigella flexneri

ARGS

From SHIGELLACYC

E. coli O157

ARGS

From ECOO157CYC

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Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF03485 Arginyl tRNA synthetase N terminal domain

Superfamily (EcoliWiki Page)

SUPERFAMILY:47323

Superfamily (EcoliWiki Page)

SUPERFAMILY:52374

Panther (EcoliWiki Page)

PTHR11956:SF0

Superfamily (EcoliWiki Page)

SUPERFAMILY:55190

Pfam (EcoliWiki Page)

PF00750 tRNA synthetases class I (R)

Pfam (EcoliWiki Page)

PF05746 DALR anticodon binding domain

EcoCyc

EcoCyc:EG10071

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10071

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000067

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0069

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0006264

Escherichia coli str. K-12 substr. MG1655

edit table


Notes

Links

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References

[back to top]


See Help:References for how to manage references in EcoliWiki.


Categories

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