yoaE:Evolution: Difference between revisions

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!|Organism!!Homologs (Statistics)!!Comments
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!|Database!!Accession!!Notes
!|Database!!Accession!!Notes
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF03471 PF03471  Transporter associated domain]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF00571 PF00571  CBS domain]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF00571 PF00571 CBS domain]
[http://pfam.janelia.org/family/PF03741 PF03741 Integral membrane protein TerC family]
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[[EcoCyc]]
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EcoCyc:G6997
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG13517
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120003584
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB3290
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0006045
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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Latest revision as of 08:33, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000027583 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Dictyostelium discoideum

  • YP_026171 (score: 0.060)
  • DDB0206299 (score: 1.000; bootstrap: 80%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000128918 (score: 1.000; bootstrap: 100%)
  • NEWSINFRUP00000145364 (score: 0.294)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00003869001 (score: 1.000; bootstrap: 100%)
  • GSTENP00010692001 (score: 0.424)
  • GSTENP00025339001 (score: 0.291)
  • GSTENP00025350001 (score: 0.276)
  • GSTENP00025330001 (score: 0.211)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000051685 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Shigella flexneri

YOAE

From SHIGELLACYC

E. coli O157

YOAE

From ECOO157CYC

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Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF03471 Transporter associated domain

Pfam (EcoliWiki Page)

PF00571 CBS domain

Superfamily (EcoliWiki Page)

SUPERFAMILY:54631

Pfam (EcoliWiki Page)

PF03741 Integral membrane protein TerC family

EcoCyc

EcoCyc:G6997

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG13517

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120003584

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB3290

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0006045

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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