pabB:Evolution: Difference between revisions

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!Organism!!Homologs (Statistics)!!Comments
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''Arabidopsis thaliana''   
''Arabidopsis thaliana''   
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''Oryza gramene''   
''Oryza gramene''   
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From Inparanoid:20070104  
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''Shigella flexneri''   
''Shigella flexneri''   
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''E. coli'' O157  
''E. coli'' O157  
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===Do-It-Yourself Web Tools===
===Do-It-Yourself Web Tools===
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!Database!!Accession!!Notes
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF00425 PF00425  chorismate binding enzyme]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF04715 PF04715  Anthranilate synthase component I, N terminal region]
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[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])
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[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF04715 PFAM:PF04715]
[http://www.pantherdb.org/ Panther] ([[Panther|EcoliWiki Page]])
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[http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11236:SF11 PTHR11236:SF11]
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=56322 SUPERFAMILY:56322]
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[[EcoCyc]]
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EcoCyc:EG10683
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG10683
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120000676
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB0677
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0006031
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
 
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===Notes===
===Notes===
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==References==
==References==
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{{RefHelp}}
{{RefHelp}}
<references/>
<references />
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===Categories===
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Latest revision as of 08:33, 27 May 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Arabidopsis thaliana

  • AT5G05730 (score: 1.000; bootstrap: 56%)
  • AT2G29690 (score: 0.590)
  • AT3G55870 (score: 0.522)

From Inparanoid:20070104

Oryza gramene

  • Q5Z856 (score: 1.000; bootstrap: 52%)

From Inparanoid:20070104

Shigella flexneri

PABB

From SHIGELLACYC

E. coli O157

PABB

From ECOO157CYC

edit table


Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF00425 chorismate binding enzyme

Pfam (EcoliWiki Page)

PF04715 Anthranilate synthase component I, N terminal region

Panther (EcoliWiki Page)

PTHR11236:SF11

Superfamily (EcoliWiki Page)

SUPERFAMILY:56322

EcoCyc

EcoCyc:EG10683

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10683

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000676

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0677

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0006031

Escherichia coli str. K-12 substr. MG1655

edit table


Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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