astC:Evolution: Difference between revisions

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deleting Pfam from accessions table on evolution pages
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!|Organism!!Homologs (Statistics)!!Comments
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!|Database!!Accession!!Notes
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF00202 PF00202  Aminotransferase class-III]
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[[EcoCyc]]
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EcoCyc:G6944
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG13999
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120003532
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB3755
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0005824
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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Latest revision as of 08:33, 27 May 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000010754 (score: 1.000; bootstrap: 99%)
  • ENSANGP00000014450 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000010852 (score: 1.000; bootstrap: 90%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT1G80600 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000009097 (score: 1.000; bootstrap: 90%)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00030775 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00015814 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000016293 (score: 1.000; bootstrap: 76%)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0231481 (score: 1.000; bootstrap: 94%)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0022774 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA21318-PA (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000000068 (score: 1.000; bootstrap: 98%)
  • ENSGALP00000000529 (score: 0.424)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000224242 (score: 1.000; bootstrap: 95%)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000008293 (score: 1.000; bootstrap: 46%)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000020699 (score: 1.000; bootstrap: 92%)

From Inparanoid:20070104

Mus musculus

  • MGI:97394 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Oryza gramene

  • Q688Q8 (score: 1.000; bootstrap: 99%)
  • Q6Z3A4 (score: 0.299)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000005344 (score: 1.000; bootstrap: 94%)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000022628 (score: 1.000; bootstrap: 92%)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YOL140W (score: 1.000; bootstrap: 94%)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPCC7779c (score: 1.000; bootstrap: 98%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000160825 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00035924001 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000050564 (score: 1.000; bootstrap: 96%)
  • ENSXETP00000051809 (score: 0.176)

From Inparanoid:20070104

E. coli O157

CSTC

From ECOO157CYC

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Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF00202 Aminotransferase class-III

Superfamily (EcoliWiki Page)

SUPERFAMILY:53383

Panther (EcoliWiki Page)

PTHR11986:SF19

EcoCyc

EcoCyc:G6944

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG13999

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120003532

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB3755

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0005824

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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