dcp:Evolution: Difference between revisions

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!Organism!!Homologs (Statistics)!!Comments
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''Anopheles gambiae''   
''Anopheles gambiae''   
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''Apis mellifera''   
''Apis mellifera''   
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''Caenorhabditis briggsae''   
''Caenorhabditis briggsae''   
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''Caenorhabditis elegans''   
''Caenorhabditis elegans''   
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From Inparanoid:20070104  
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''Drosophila melanogaster''   
''Drosophila melanogaster''   
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From Inparanoid:20070104  
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''Drosophila pseudoobscura''   
''Drosophila pseudoobscura''   
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From Inparanoid:20070104  
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''Gallus gallus''   
''Gallus gallus''   
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From Inparanoid:20070104  
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''Pan troglodytes''   
''Pan troglodytes''   
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''Schizosaccharomyces pombe''   
''Schizosaccharomyces pombe''   
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''Shigella flexneri''   
''Shigella flexneri''   
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From SHIGELLACYC  
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''E. coli'' O157  
''E. coli'' O157  
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From ECOO157CYC  
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===Do-It-Yourself Web Tools===
===Do-It-Yourself Web Tools===
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!Database!!Accession!!Notes
!|Database!!Accession!!Notes
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[http://www.pantherdb.org/ Panther] ([[Panther|EcoliWiki Page]])
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[http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11804:SF8 PTHR11804:SF8]
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=55486 SUPERFAMILY:55486]
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[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])  
[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF01432 PFAM:PF01432]
[http://pfam.janelia.org/family/PF01432 PF01432 Peptidase family M3]
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[[EcoCyc]]
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EcoCyc:EG10212
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG10212
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120000206
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB0208
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0005133
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
 
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===Notes===
===Notes===
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==References==
==References==
{{BacktoTop}}
{{BacktoTop}}
{{RefHelp}}
{{RefHelp}}
<references/>
<references />
<noinclude>
__NOTOC__
__NOTOC__
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===Categories===
===Categories===
{{BacktoTop}}
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Latest revision as of 08:32, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000020780 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000027508 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00023765 (score: 1.000; bootstrap: 65%)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00013997 (score: 1.000; bootstrap: 71%)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0039252 (score: 1.000; bootstrap: 86%)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA11189-PA (score: 1.000; bootstrap: 77%)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000023776 (score: 1.000; bootstrap: 56%)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000028990 (score: 1.000; bootstrap: 98%)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPAC1F30c (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Shigella flexneri

DCP

From SHIGELLACYC

E. coli O157

DCP

From ECOO157CYC

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Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Panther (EcoliWiki Page)

PTHR11804:SF8

Superfamily (EcoliWiki Page)

SUPERFAMILY:55486

Pfam (EcoliWiki Page)

PF01432 Peptidase family M3

EcoCyc

EcoCyc:EG10212

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10212

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000206

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0208

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0005133

Escherichia coli str. K-12 substr. MG1655

edit table


Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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