ydaM:Evolution: Difference between revisions

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deleting Pfam from accessions table on evolution pages
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!|Organism!!Homologs (Statistics)!!Comments
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!|Database!!Accession!!Notes
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF00990 PF00990  GGDEF domain]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF08448 PF08448  PAS fold]
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[[EcoCyc]]
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EcoCyc:G6673
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG13355
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120003268
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB3138
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0004504
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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Latest revision as of 08:32, 27 May 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000000028 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0185528 (score: 1.000; bootstrap: 100%)
  • DDB0229846 (score: 0.150)
  • DDB0167213 (score: 0.147)
  • DDB0217588 (score: 0.142)
  • DDB0169144 (score: 0.141)
  • DDB0189729 (score: 0.140)
  • DDB0187557 (score: 0.140)
  • DDB0189622 (score: 0.140)
  • DDB0219416 (score: 0.136)
  • DDB0215287 (score: 0.135)
  • DDB0218359 (score: 0.135)
  • DDB0203706 (score: 0.134)
  • DDB0203610 (score: 0.129)
  • DDB0190180 (score: 0.129)
  • DDB0189776 (score: 0.129)
  • DDB0232147 (score: 0.129)
  • DDB0214836 (score: 0.128)
  • DDB0230105 (score: 0.127)
  • DDB0218627 (score: 0.125)
  • DDB0186902 (score: 0.125)
  • DDB0191336 (score: 0.125)
  • DDB0186162 (score: 0.122)
  • DDB0229424 (score: 0.122)
  • DDB0216327 (score: 0.121)
  • DDB0190268 (score: 0.121)
  • DDB0187521 (score: 0.121)
  • DDB0203699 (score: 0.117)
  • DDB0205138 (score: 0.116)
  • DDB0220469 (score: 0.115)
  • DDB0219538 (score: 0.115)
  • DDB0218251 (score: 0.115)
  • DDB0216545 (score: 0.114)
  • DDB0218894 (score: 0.114)
  • DDB0220484 (score: 0.114)
  • DDB0217492 (score: 0.113)
  • DDB0191606 (score: 0.112)
  • DDB0217787 (score: 0.112)
  • DDB0189627 (score: 0.112)
  • DDB0229844 (score: 0.110)
  • DDB0203942 (score: 0.110)
  • DDB0219241 (score: 0.108)
  • DDB0218877 (score: 0.106)
  • DDB0169381 (score: 0.106)
  • DDB0204242 (score: 0.105)
  • DDB0218585 (score: 0.105)
  • DDB0220101 (score: 0.105)
  • DDB0185561 (score: 0.104)
  • DDB0202130 (score: 0.104)
  • DDB0203201 (score: 0.104)
  • DDB0230046 (score: 0.103)
  • DDB0218732 (score: 0.103)
  • DDB0229968 (score: 0.103)
  • DDB0229877 (score: 0.100)
  • DDB0190883 (score: 0.100)
  • DDB0219375 (score: 0.100)
  • DDB0187962 (score: 0.100)
  • DDB0167808 (score: 0.100)
  • DDB0189568 (score: 0.100)
  • DDB0216980 (score: 0.099)
  • DDB0220617 (score: 0.098)
  • DDB0169228 (score: 0.098)
  • DDB0231323 (score: 0.097)
  • DDB0220098 (score: 0.097)
  • DDB0203809 (score: 0.096)
  • DDB0231107 (score: 0.095)
  • DDB0219912 (score: 0.095)
  • DDB0189545 (score: 0.095)
  • DDB0192175 (score: 0.094)
  • DDB0190465 (score: 0.094)
  • DDB0190122 (score: 0.094)
  • DDB0186757 (score: 0.093)
  • DDB0220100 (score: 0.093)
  • DDB0167340 (score: 0.092)
  • DDB0191270 (score: 0.092)
  • DDB0220644 (score: 0.092)
  • DDB0190151 (score: 0.091)
  • DDB0217496 (score: 0.090)
  • DDB0189395 (score: 0.090)
  • DDB0217956 (score: 0.089)
  • DDB0204913 (score: 0.088)
  • DDB0189575 (score: 0.088)
  • DDB0231781 (score: 0.087)
  • DDB0218162 (score: 0.087)
  • DDB0205673 (score: 0.087)
  • DDB0168534 (score: 0.087)
  • DDB0185218 (score: 0.087)
  • DDB0185928 (score: 0.087)
  • DDB0220002 (score: 0.086)
  • DDB0217728 (score: 0.086)
  • DDB0217622 (score: 0.085)
  • DDB0191612 (score: 0.084)
  • DDB0205468 (score: 0.084)
  • DDB0205678 (score: 0.084)
  • DDB0204630 (score: 0.084)
  • DDB0189672 (score: 0.084)
  • DDB0219500 (score: 0.083)
  • DDB0191751 (score: 0.083)
  • DDB0191783 (score: 0.083)
  • DDB0220503 (score: 0.083)
  • DDB0204363 (score: 0.082)
  • DDB0231292 (score: 0.082)
  • DDB0191621 (score: 0.082)
  • DDB0219317 (score: 0.082)
  • DDB0218793 (score: 0.082)
  • DDB0229347 (score: 0.082)
  • DDB0188963 (score: 0.081)
  • DDB0216881 (score: 0.081)
  • DDB0190155 (score: 0.081)
  • DDB0231558 (score: 0.080)
  • DDB0215339 (score: 0.080)
  • DDB0189420 (score: 0.080)
  • DDB0218099 (score: 0.079)
  • DDB0217562 (score: 0.078)
  • DDB0218800 (score: 0.078)
  • DDB0188510 (score: 0.078)
  • DDB0217642 (score: 0.078)
  • DDB0206510 (score: 0.078)
  • DDB0220480 (score: 0.077)
  • DDB0169450 (score: 0.077)
  • DDB0218470 (score: 0.077)
  • DDB0188131 (score: 0.077)
  • DDB0203331 (score: 0.077)
  • DDB0217224 (score: 0.077)
  • DDB0219992 (score: 0.077)
  • DDB0187605 (score: 0.077)
  • DDB0216955 (score: 0.077)
  • DDB0185203 (score: 0.076)
  • DDB0216684 (score: 0.076)
  • DDB0188903 (score: 0.076)
  • DDB0220618 (score: 0.075)
  • DDB0202116 (score: 0.075)
  • DDB0169187 (score: 0.075)
  • DDB0190700 (score: 0.075)
  • DDB0203871 (score: 0.074)
  • DDB0218371 (score: 0.073)
  • DDB0201987 (score: 0.073)
  • DDB0204313 (score: 0.073)
  • DDB0219647 (score: 0.073)
  • DDB0190915 (score: 0.072)
  • DDB0201744 (score: 0.072)
  • DDB0191608 (score: 0.071)
  • DDB0186079 (score: 0.071)
  • DDB0205661 (score: 0.071)
  • DDB0217791 (score: 0.071)
  • DDB0216929 (score: 0.071)
  • DDB0217348 (score: 0.071)
  • DDB0168041 (score: 0.071)
  • DDB0187939 (score: 0.070)
  • DDB0203653 (score: 0.070)
  • DDB0206201 (score: 0.070)
  • DDB0218265 (score: 0.069)
  • DDB0188278 (score: 0.069)
  • DDB0205274 (score: 0.069)
  • DDB0168646 (score: 0.068)
  • DDB0190488 (score: 0.068)
  • DDB0183911 (score: 0.068)
  • DDB0218209 (score: 0.068)
  • DDB0186456 (score: 0.067)
  • DDB0205932 (score: 0.067)
  • DDB0183780 (score: 0.067)
  • DDB0189261 (score: 0.066)
  • DDB0188684 (score: 0.066)
  • DDB0219315 (score: 0.066)
  • DDB0188996 (score: 0.065)
  • DDB0185896 (score: 0.065)
  • DDB0204646 (score: 0.065)
  • DDB0188347 (score: 0.065)
  • DDB0204882 (score: 0.065)
  • DDB0216167 (score: 0.065)
  • DDB0188922 (score: 0.064)
  • DDB0204807 (score: 0.064)
  • DDB0191390 (score: 0.064)
  • DDB0187137 (score: 0.064)
  • DDB0202086 (score: 0.062)
  • DDB0219805 (score: 0.062)
  • DDB0232156 (score: 0.061)
  • DDB0219601 (score: 0.060)
  • DDB0217334 (score: 0.060)
  • DDB0168053 (score: 0.060)
  • DDB0218641 (score: 0.060)
  • DDB0206433 (score: 0.060)
  • DDB0206211 (score: 0.060)
  • DDB0229866 (score: 0.060)
  • DDB0184259 (score: 0.059)
  • DDB0188075 (score: 0.059)
  • DDB0220091 (score: 0.059)
  • DDB0204288 (score: 0.059)
  • DDB0202847 (score: 0.058)
  • DDB0219994 (score: 0.058)
  • DDB0231992 (score: 0.058)
  • DDB0232150 (score: 0.058)
  • DDB0232365 (score: 0.057)
  • DDB0206393 (score: 0.057)
  • DDB0206039 (score: 0.057)
  • DDB0217083 (score: 0.057)
  • DDB0187197 (score: 0.057)
  • DDB0189753 (score: 0.057)
  • DDB0188719 (score: 0.056)
  • DDB0205035 (score: 0.056)
  • DDB0217124 (score: 0.056)
  • DDB0217291 (score: 0.056)
  • DDB0205351 (score: 0.056)
  • DDB0217825 (score: 0.055)
  • DDB0218752 (score: 0.055)
  • DDB0185985 (score: 0.055)
  • DDB0186607 (score: 0.054)
  • DDB0215217 (score: 0.054)
  • DDB0206011 (score: 0.054)
  • DDB0231335 (score: 0.053)
  • DDB0168181 (score: 0.053)
  • DDB0217199 (score: 0.053)
  • DDB0190573 (score: 0.053)
  • DDB0204997 (score: 0.053)
  • DDB0188214 (score: 0.053)
  • DDB0217047 (score: 0.053)
  • DDB0185950 (score: 0.052)
  • DDB0218829 (score: 0.052)
  • DDB0188052 (score: 0.052)
  • DDB0218310 (score: 0.051)
  • DDB0216866 (score: 0.051)

From Inparanoid:20070104

E. coli O157

Z2421

From ECOO157CYC

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Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF00990 GGDEF domain

Superfamily (EcoliWiki Page)

SUPERFAMILY:55073

Superfamily (EcoliWiki Page)

SUPERFAMILY:55785

Pfam (EcoliWiki Page)

PF08448 PAS fold

EcoCyc

EcoCyc:G6673

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG13355

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120003268

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB3138

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0004504

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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