ycjT:Evolution: Difference between revisions

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!|Organism!!Homologs (Statistics)!!Comments
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!|Database!!Accession!!Notes
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[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])  
[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF03636 PFAM:PF03636]
[http://pfam.janelia.org/family/PF03633 PF03633  Glycosyl hydrolase family 65, C-terminal domain ]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF03632 PF03632  Glycosyl hydrolase family 65 central catalytic domain]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF03636 PF03636 Glycosyl hydrolase family 65, N-terminal domain ]
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[http://www.pantherdb.org/ Panther] ([[Panther|EcoliWiki Page]])
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[http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11051:SF4 PTHR11051:SF4]
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=74650 SUPERFAMILY:74650]
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[[EcoCyc]]
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EcoCyc:G6654
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG13917
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120003249
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB3676
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0004418
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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Latest revision as of 08:32, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000020774 (score: 1.000; bootstrap: 100%)
  • ENSANGP00000020754 (score: 0.139)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0218885 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA14242-PA (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000006728 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000020004 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000044528 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Shigella flexneri

YCJT

From SHIGELLACYC

E. coli O157

YCJT

From ECOO157CYC

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Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF03633 Glycosyl hydrolase family 65, C-terminal domain

Pfam (EcoliWiki Page)

PF03632 Glycosyl hydrolase family 65 central catalytic domain

Pfam (EcoliWiki Page)

PF03636 Glycosyl hydrolase family 65, N-terminal domain

Superfamily (EcoliWiki Page)

SUPERFAMILY:48208

Panther (EcoliWiki Page)

PTHR11051:SF4

Superfamily (EcoliWiki Page)

SUPERFAMILY:74650

EcoCyc

EcoCyc:G6654

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG13917

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120003249

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB3676

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0004418

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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