rnb:Evolution: Difference between revisions

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!|Organism!!Homologs (Statistics)!!Comments
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF00575 PF00575  S1 RNA binding domain]
[http://pfam.janelia.org/family/PF00575 PF00575  S1 RNA binding domain]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF08206 PF08206  Ribonuclease B OB domain]
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[[EcoCyc]]
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EcoCyc:EG11620
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG11620
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120001568
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB1577
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0004320
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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Latest revision as of 08:32, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Apis mellifera

  • ENSAPMP00000006616 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000037928 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00034256 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00001001 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA19573-PA (score: 1.000; bootstrap: 100%)
  • GA14227-PA (score: 0.066)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000027317 (score: 1.000; bootstrap: 100%)
  • ENSGALP00000012585 (score: 0.113)

From Inparanoid:20070104

Oryza gramene

  • Q6Z6A3 (score: 1.000; bootstrap: 100%)
  • Q9SNK4 (score: 0.110)
  • Q8H885 (score: 0.095)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPBC26H80 (score: 1.000; bootstrap: 100%)
  • SPAC2C47c (score: 0.107)

From Inparanoid:20070104

Shigella flexneri

RNB

From SHIGELLACYC

E. coli O157

RNB

From ECOO157CYC

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Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Panther (EcoliWiki Page)

PTHR23355:SF6

Pfam (EcoliWiki Page)

PF00773 RNB domain

Pfam (EcoliWiki Page)

PF00575 S1 RNA binding domain

Pfam (EcoliWiki Page)

PF08206 Ribonuclease B OB domain

EcoCyc

EcoCyc:EG11620

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG11620

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120001568

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB1577

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0004320

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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