dadA:Evolution: Difference between revisions

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!|Organism!!Homologs (Statistics)!!Comments
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!|Database!!Accession!!Notes
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[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])  
[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF01266 PFAM:PF01266]
[http://pfam.janelia.org/family/PF01266 PF01266 FAD dependent oxidoreductase]
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=54373 SUPERFAMILY:54373]
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[[EcoCyc]]
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EcoCyc:EG11407
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG11407
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120001373
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB1379
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0003995
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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Latest revision as of 08:31, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Arabidopsis thaliana

  • AT5G48440 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000006989 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Oryza gramene

  • Q69IN0 (score: 1.000; bootstrap: 100%)
  • Q69IN1 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000014249 (score: 1.000; bootstrap: 100%)
  • ENSPTRP00000014160 (score: 0.145)
  • ENSPTRP00000029147 (score: 0.124)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000032023 (score: 1.000; bootstrap: 100%)
  • ENSRNOP00000009555 (score: 0.111)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000041621 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Shigella flexneri

DADA

From SHIGELLACYC

E. coli O157

DADA

From ECOO157CYC

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Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF01266 FAD dependent oxidoreductase

Superfamily (EcoliWiki Page)

SUPERFAMILY:51905

Panther (EcoliWiki Page)

PTHR13847:SF13

Superfamily (EcoliWiki Page)

SUPERFAMILY:54373

EcoCyc

EcoCyc:EG11407

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG11407

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120001373

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB1379

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0003995

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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