ycfH:Evolution: Difference between revisions

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!|Organism!!Homologs (Statistics)!!Comments
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!|Database!!Accession!!Notes
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF01026 PF01026  TatD related DNase]
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[[EcoCyc]]
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EcoCyc:EG12303
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG12303
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120002182
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB2209
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0003719
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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Latest revision as of 08:31, 27 May 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Arabidopsis thaliana

  • AT3G03500 (score: 1.000; bootstrap: 100%)
  • AT5G17570 (score: 0.609)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000020276 (score: 1.000; bootstrap: 56%)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-050522-192 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-050522-192 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0218082 (score: 1.000; bootstrap: 96%)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000031297 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Mus musculus

  • MGI:1916222 (score: 1.000; bootstrap: 82%)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YP_026271 (score: 1.000; bootstrap: 100%)
  • YBL055C (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000143817 (score: 1.000; bootstrap: 100%)
  • NEWSINFRUP00000143815 (score: 0.821)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00035765001 (score: 1.000; bootstrap: 100%)
  • GSTENP00020684001 (score: 0.339)
  • GSTENP00026791001 (score: 0.269)

From Inparanoid:20070104

Shigella flexneri

YCFH

From SHIGELLACYC

E. coli O157

YCFH

From ECOO157CYC

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Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Superfamily (EcoliWiki Page)

SUPERFAMILY:51556

Panther (EcoliWiki Page)

PTHR10060:SF0

Pfam (EcoliWiki Page)

PF01026 TatD related DNase

EcoCyc

EcoCyc:EG12303

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG12303

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120002182

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB2209

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0003719

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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