yccX:Evolution: Difference between revisions

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!|Database!!Accession!!Notes
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[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])  
[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF00708 PFAM:PF00708]
[http://pfam.janelia.org/family/PF00708 PF00708 Acylphosphatase]
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[http://www.pantherdb.org/ Panther] ([[Panther|EcoliWiki Page]])
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[http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10029:SF3 PTHR10029:SF3]
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=54975 SUPERFAMILY:54975]
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[[EcoCyc]]
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EcoCyc:G6502
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG13726
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120003102
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB3490
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0003276
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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Latest revision as of 08:31, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000016557 (score: 1.000; bootstrap: 100%)
  • ENSANGP00000018310 (score: 0.078)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000018595 (score: 1.000; bootstrap: 100%)
  • ENSBTAP00000008994 (score: 0.120)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000025059 (score: 1.000; bootstrap: 100%)
  • ENSCAFP00000023431 (score: 0.973)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA14187-PA (score: 1.000; bootstrap: 100%)
  • GA14755-PA (score: 0.778)
  • GA14909-PA (score: 0.222)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000016749 (score: 1.000; bootstrap: 100%)
  • ENSGALP00000013246 (score: 0.358)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000306448 (score: 1.000; bootstrap: 100%)
  • ENSP00000238618 (score: 0.451)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000002871 (score: 1.000; bootstrap: 100%)
  • ENSMMUP00000004180 (score: 0.379)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000007444 (score: 1.000; bootstrap: 100%)
  • ENSMODP00000002050 (score: 0.118)

From Inparanoid:20070104

Mus musculus

  • MGI:1922822 (score: 1.000; bootstrap: 100%)
  • MGI:1913454 (score: 0.475)

From Inparanoid:20070104

Oryza gramene

  • Q5Z6P5 (score: 1.000; bootstrap: 100%)
  • Q5Z6P6 (score: 0.510)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000020471 (score: 1.000; bootstrap: 100%)
  • ENSPTRP00000011126 (score: 0.451)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000138931 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00003377001 (score: 1.000; bootstrap: 100%)
  • GSTENP00032314001 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000029009 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Shigella flexneri

S1036

From SHIGELLACYC

E. coli O157

Z1320

From ECOO157CYC

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Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF00708 Acylphosphatase

Panther (EcoliWiki Page)

PTHR10029:SF3

Superfamily (EcoliWiki Page)

SUPERFAMILY:54975

EcoCyc

EcoCyc:G6502

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG13726

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120003102

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB3490

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0003276

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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