ybaL:Evolution: Difference between revisions

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From ECOO157CYC  
From ECOO157CYC  


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!|Database!!Accession!!Notes
!|Database!!Accession!!Notes
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[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])  
[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF02254 PFAM:PF02254]
[http://pfam.janelia.org/family/PF00999 PF00999  Sodium/hydrogen exchanger family]
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=51735 SUPERFAMILY:51735]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF02254 PF02254  TrkA-N domain]
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[[EcoCyc]]
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EcoCyc:EG12623
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG12623
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120002335
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB2507
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0001658
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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Latest revision as of 08:30, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Bos taurus

  • ENSBTAP00000020850 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00009617 (score: 1.000; bootstrap: 100%)
  • WBGene00010214 (score: 0.678)
  • WBGene00009618 (score: 0.274)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000009546 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000005318 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0219541 (score: 1.000; bootstrap: 100%)
  • DDB0184575 (score: 0.148)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000027112 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000279934 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000004640 (score: 1.000; bootstrap: 100%)
  • ENSMODP00000016169 (score: 0.217)

From Inparanoid:20070104

Mus musculus

  • MGI:2444946 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Oryza gramene

  • Q5Z8T1 (score: 1.000; bootstrap: 73%)
  • Q8S5V1 (score: 0.347)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000010303 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000026281 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YJL094C (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPAC1051c (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00017938001 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000038550 (score: 1.000; bootstrap: 74%)

From Inparanoid:20070104

Shigella flexneri

YBAL

From SHIGELLACYC

E. coli O157

YBAL

From ECOO157CYC

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Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF00999 Sodium/hydrogen exchanger family

Superfamily (EcoliWiki Page)

SUPERFAMILY:51735

Pfam (EcoliWiki Page)

PF02254 TrkA-N domain

EcoCyc

EcoCyc:EG12623

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG12623

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120002335

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB2507

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0001658

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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