frr:Evolution: Difference between revisions

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!|Database!!Accession!!Notes
!|Database!!Accession!!Notes
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[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])  
[http://www.pantherdb.org/ Panther] ([[Panther|EcoliWiki Page]])
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[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF01765 PFAM:PF01765]
[http://www.pantherdb.org/panther/family.do?clsAccession=PTHR20982:SF3 PTHR20982:SF3]
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=55194 SUPERFAMILY:55194]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF01765 PF01765  Ribosome recycling factor]
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[[EcoCyc]]
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EcoCyc:EG10335
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG10335
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120000329
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB0331
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0000588
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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Latest revision as of 08:29, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000012806 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT3G63190 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000024516 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000030068 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-040704-12 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-040704-12 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0216552 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0035980 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA18189-PA (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000002036 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000297908 (score: 1.000; bootstrap: 100%)
  • ENSP00000312608 (score: 0.870)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000016919 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000024564 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Mus musculus

  • MGI:1915121 (score: 1.000; bootstrap: 100%)
  • MGI:3647016 (score: 0.892)

From Inparanoid:20070104

Oryza gramene

  • Q6YTV7 (score: 1.000; bootstrap: 98%)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000038295 (score: 1.000; bootstrap: 100%)
  • ENSPTRP00000046978 (score: 0.405)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000038041 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YHR038W (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000035629 (score: 1.000; bootstrap: 63%)

From Inparanoid:20070104

Shigella flexneri

FRR

From SHIGELLACYC

E. coli O157

FRR

From ECOO157CYC

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Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Panther (EcoliWiki Page)

PTHR20982:SF3

Superfamily (EcoliWiki Page)

SUPERFAMILY:55194

Pfam (EcoliWiki Page)

PF01765 Ribosome recycling factor

EcoCyc

EcoCyc:EG10335

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10335

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000329

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0331

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0000588

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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