yfaQ:Evolution: Difference between revisions

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!Organism!!Homologs (Statistics)!!Comments
!|Organism!!Homologs (Statistics)!!Comments
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''Shigella flexneri''   
''Shigella flexneri''   
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From SHIGELLACYC  
From SHIGELLACYC  
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''E. coli'' O157
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Z3480
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From ECOO157CYC
 
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===Do-It-Yourself Web Tools===
<protect><!--Families_notes--></protect>
*[http://130.14.29.110/BLAST/ BLAST]
*[http://130.14.29.110/BLAST/Blast.cgi?CMD=Web&LAYOUT=TwoWindows&AUTO_FORMAT=Semiauto&ALIGNMENTS=250&ALIGNMENT_VIEW=Pairwise&CLIENT=web&COMPOSITION_BASED_STATISTICS=on&DATABASE=nr&CDD_SEARCH=on&DESCRIPTIONS=500&ENTREZ_QUERY=%28none%29&EXPECT=10&FORMAT_OBJECT=Alignment&FORMAT_TYPE=HTML&I_THRESH=0.005&MATRIX_NAME=BLOSUM62&NCBI_GI=on&PAGE=Proteins&PROGRAM=blastp&RUN_PSIBLAST=on&SERVICE=plain&SET_DEFAULTS.x=36&SET_DEFAULTS.y=5&SHOW_OVERVIEW=on&END_OF_HTTPGET=Yes&SHOW_LINKOUT=yes&GET_SEQUENCE=yes&SEARCH_NAME=psi_bp/ CDD]
*[http://inparanoid.sbc.su.se/cgi-bin/eid_search.pl?id=NP_416730&idtype=all&start=on&species=All&conf=0.05 InParanoid]
*[http://www.sanger.ac.uk/PostGenomics/S_pombe/YOGY/ YOGY]
 
<protect><!--Homology_notes--></protect>
===Notes===
===Notes===


==Families==
==Families==
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{|  id="Q4c604f44c362b"  class=" tableEdit Evolution_families_table" 
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!Organism!!Homologs (Statistics)!!Comments
!|Database!!Accession!!Notes
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF10062 PF10062  Predicted secreted protein (DUF2300)]
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''Shigella flexneri'' 
[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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S2435
[http://pfam.janelia.org/family/PF10062 PF10062  Predicted secreted protein (DUF2300)]
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From SHIGELLACYC
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''E. coli'' O157
[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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Z3480
[http://pfam.janelia.org/family/PF08486 PF08486  Stage II sporulation protein]
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From ECOO157CYC
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===Notes===
===Notes===


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==References==
==References==
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<references/>
<references />
<noinclude>
__NOTOC__
__NOTOC__
[[Category:Genes with homologs in Shigella flexneri ]][[Category:Genes with homologs in E. coli O157]]</noinclude>
===Categories===
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[[Category:Genes with homologs in Shigella flexneri ]]
[[Category:Genes with homologs in E. coli O157]]

Latest revision as of 20:39, 16 August 2011

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Shigella flexneri

S2435

From SHIGELLACYC

E. coli O157

Z3480

From ECOO157CYC

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Notes

Families

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See Help:Evolution_families for help entering or editing information in this section of EcoliWiki.

Database Accession Notes

Pfam (EcoliWiki Page)

PF10062 Predicted secreted protein (DUF2300)

Pfam (EcoliWiki Page)

PF10062 Predicted secreted protein (DUF2300)

Pfam (EcoliWiki Page)

PF08486 Stage II sporulation protein


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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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