Protein Feature Ontology: Difference between revisions

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[[Category:Databases]]
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{| {{Prettytable}} width='30%' align="right"  id="Y4926fa4521d71"  class=" tableEdit Database_table" 


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!align=left {{table heading style}} |Link/URL:
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http://www.ebi.ac.uk/ontology-lookup/browse.do?ontName=BS
[http://www.ebi.ac.uk/ontology-lookup/browse.do?ontName=BS Protein Feature Ontology]
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!align=left {{table heading style}} |What:
!align=left {{table heading style}} |What:
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==About {{PAGENAME}} {{HelpIcon|Help:Databases}}==
==About {{PAGENAME}} {{HelpIcon|Help:Databases}}==
Snipped from [http://bioinformatics.oxfordjournals.org/cgi/content/full/24/23/2767?etoc http://bioinformatics.oxfordjournals.org/cgi/content/full/24/23/2767?etoc]
Snipped from [http://bioinformatics.oxfordjournals.org/cgi/content/full/24/23/2767?etoc http://bioinformatics.oxfordjournals.org/cgi/content/full/24/23/2767?etoc]
The Protein Feature Ontology <ref name ='PMID:18936051'/> has been developed to provide a structured controlled vocabulary for features   
<blockquote>The Protein Feature Ontology <ref name ='PMID:18936051'/> has been developed to provide a structured controlled vocabulary for features   
  on a protein sequence  or structure and comprises ~100 positional terms, now integrated into the Sequence Ontology (SO) and 40   
  on a protein sequence  or structure and comprises ~100 positional terms, now integrated into the Sequence Ontology (SO) and 40   
  non-positional terms which describe features relating to the whole-protein sequence. In addition, post-translational modifications are  
  non-positional terms which describe features relating to the whole-protein sequence. In addition, post-translational modifications are  
  described by using a pre-existing ontology, the Protein Modification Ontology (MOD).   
  described by using a pre-existing ontology, the Protein Modification Ontology (MOD).  </blockquote>
{{PAGENAME}} is available at [http://www.ebi.ac.uk/ontology-lookup/browse.do?ontName=BS http://www.ebi.ac.uk/ontology-lookup/browse.do?ontName=BS]
{{PAGENAME}} is available at [http://www.ebi.ac.uk/ontology-lookup/browse.do?ontName=BS http://www.ebi.ac.uk/ontology-lookup/browse.do?ontName=BS]


Latest revision as of 00:10, 23 May 2010

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Protein Feature Ontology

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About Protein Feature Ontology

Snipped from http://bioinformatics.oxfordjournals.org/cgi/content/full/24/23/2767?etoc

The Protein Feature Ontology [1] has been developed to provide a structured controlled vocabulary for features

on a protein sequence or structure and comprises ~100 positional terms, now integrated into the Sequence Ontology (SO) and 40 non-positional terms which describe features relating to the whole-protein sequence. In addition, post-translational modifications are

described by using a pre-existing ontology, the Protein Modification Ontology (MOD).

Protein Feature Ontology is available at http://www.ebi.ac.uk/ontology-lookup/browse.do?ontName=BS

Content

Using Protein Feature Ontology

Browsing

Searching

Usage examples

Add links to additional pages describing success stories here.

Other sites with related content

Technology

Web Services/API

Discussion

References

  1. ↑ Reeves, GA et al. (2008) The Protein Feature Ontology: a tool for the unification of protein feature annotations. Bioinformatics 24 2767-72 PubMed

External Links

Protein Feature Ontology URL:http://www.ebi.ac.uk/ontology-lookup/browse.do?ontName=BS

Discussion of Protein Feature Ontology on other websites

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