soxS:Quickview

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

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Standard Name

soxS

Gene Synonym(s)

ECK4054, b4062, JW4023[1], JW4023

Product Desc.

SoxS transcriptional activator[2]; SoxS transcriptional dual regulator[3]

Global transcription regulator for superoxide response; AraC family[4]

Product Synonyms(s)

DNA-binding transcriptional dual regulator[1], B4062[2][1], SoxS[2][1], regulation of superoxide response regulon[2][1] , ECK4054, JW4023, b4062

Function from GO

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Knock-Out Phenotype
Regulation/Expression

transcription unit(s): soxS[2], OP00296

Regulation/Activity
Quick Links

porteco.png EcoCyc.gif regulondb.jpg

dnadisplay.png proteindisplay.png   pubmed.jpg   textpresso.jpg  

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Notes

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Induces sox regulon when superoxide levels increase. Induced during biofilm formation. SoxS is unstable except in a lon ftsH double mutant. This unstability is suggested to play a role in the rapid return of the regulon's gene expression to preinduced levels.[4]



References

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  1. 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.