rhaR:Quickview

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

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Standard Name

rhaR

Gene Synonym(s)

ECK3899, b3906, JW3877, rhaC, rhaC1[1], rhaC1

Product Desc.

RhaR transcriptional activator[2][3]

Transcriptional activator for rhaSR, AraC family[4]

Product Synonyms(s)

DNA-binding transcriptional activator, L-rhamnose-binding[1], B3906[2][1], RhaR[2][1], positive regulator for rhaRS operon[2][1] , ECK3899, JW3877, rhaC1, b3906

Function from GO

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Knock-Out Phenotype
Regulation/Expression

transcription unit(s): rhaSR[2], OP00087, rha

Regulation/Activity
Quick Links

porteco.png EcoCyc.gif regulondb.jpg

dnadisplay.png proteindisplay.png   pubmed.jpg   textpresso.jpg  

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Notes

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A GTG start codon 31 codons internal to the previously annotated start codon is predicted based on conservation with Salmonella, eliminating the overlap with rhaS, and having a better RBS (E. Pradel, personal communication, July, 2007).[4]



References

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  1. 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.