ybhJ:Gene Product(s)
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| Nomenclature | Function | Interactions | Localization | Sequence | Domains | Structure | Resources | Accessions | Links | References | Suggestions |
Nomenclature
See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.
| Standard name |
YbhJ |
|---|---|
| Synonyms |
predicted hydratase[1], YbhJ[2][1], B0771[2][1] , ECK0760, JW5103, b0771 |
| Product description |
AcnA homolog, function unknown; not responsible for the residual aconitase activity in acnAB double mutants[4] |
| EC number (for enzymes) |
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| edit table |
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Notes
Function
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Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.
| Qualifier | GO ID | GO term name | Reference | Evidence Code | with/from | Aspect | Notes | Status |
|---|---|---|---|---|---|---|---|---|
| GO:0005506 |
iron ion binding |
GOA:spkw |
IEA: Inferred from Electronic Annotation |
F |
Seeded from EcoCyc (v14.0) |
complete | ||
| GO:0008152 |
metabolic process |
GOA:interpro |
IEA: Inferred from Electronic Annotation |
P |
Seeded from EcoCyc (v14.0) |
complete | ||
| GO:0008152 |
metabolic process |
GOA:interpro |
IEA: Inferred from Electronic Annotation |
P |
Seeded from EcoCyc (v14.0) |
complete | ||
| GO:0008152 |
metabolic process |
GOA:interpro |
IEA: Inferred from Electronic Annotation |
P |
Seeded from EcoCyc (v14.0) |
complete | ||
| GO:0008152 |
metabolic process |
GOA:interpro |
IEA: Inferred from Electronic Annotation |
P |
Seeded from EcoCyc (v14.0) |
complete | ||
| GO:0008152 |
metabolic process |
GOA:interpro |
IEA: Inferred from Electronic Annotation |
P |
Seeded from EcoCyc (v14.0) |
complete | ||
| GO:0008152 |
metabolic process |
GOA:interpro |
IEA: Inferred from Electronic Annotation |
P |
Seeded from EcoCyc (v14.0) |
complete | ||
| GO:0046872 |
metal ion binding |
GOA:spkw |
IEA: Inferred from Electronic Annotation |
F |
Seeded from EcoCyc (v14.0) |
complete | ||
| GO:0051536 |
iron-sulfur cluster binding |
GOA:spkw |
IEA: Inferred from Electronic Annotation |
F |
Seeded from EcoCyc (v14.0) |
complete | ||
| edit table |
Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.
| Partner Type | Partner | Notes | References | Evidence |
|---|---|---|---|---|
| edit table |
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Notes
Localization
See Help:Product_localization for how to add or edit information in this section of EcoliWiki.
| Compartment | Description | Evidence | Reference/Source | Notes |
|---|---|---|---|---|
| edit table |
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Notes
Structure and Physical Properties
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Physical Properties
See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.
| Name | |
|---|---|
| Sequence |
MRRYLEHLMI KLSEKGVFLA SNNEIIAEEH FTGEIKKEEA KKGTIAWSIL SSHNTSGNMD KLKIKFDSLA SHDITFVGIV QTAKASGMER FPLPYVLTNC HNSLCAVGGT INGDDHVFGL SAAQRYGGIF VPPHIAVIHQ YMREMMAGGG KMILGSDSHT RYGALGTMAV GEGGGELVKQ LLNDTWDIDY PGVVAVHLTG KPAPYVGPQD VALAIIGAVF KNGYVKNKVM EFVGPGVSAL STDFRNSVDV MTTETTCLSS VWQTDEEVHN WLALHGRGQD YCQLNPQPMA YYDGCISVDL SAIKPMIALP FHPSNVYEID TLNQNLTDIL REIEIESERV AHGKAKLSLL DKVENGRLKV QQGIIAGCSG GNYENVIAAA NALRGQSCGN DTFSLAVYPS SQPVFMDLAK KGVVADLIGA GAIIRTAFCG PCFGAGDTPI NNGLSIRHTT RNFPNREGSK PANGQMSAVA LMDARSIAAT AANGGYLTSA SELDCWDNVP EYAFDVTPYK NRVYQGFVKG ATQQPLIYGP NIKDWPELGA LTDNIVLKVC SKILDEVTTT DELIPSGETS SYRSNPIGLA EFTLSRRDPG YVSRSKATAE LENQRLAGNV SELTEVFARI KQIAGQEHID PLQTEIGSMV YAVKPGDGSA REQAASCQRV IGGLANIAEE YATKRYRSNV INWGMLPLQM AEVPTFEVGD YIYIPGIKAA LDNPGTTFKG YVIHEDAPVT EITLYMESLT AEEREIIKAG SLINFNKNRQ M |
| Length |
761 |
| Mol. Wt |
82.604 kDa |
| pI |
5.6 (calculated) |
| Extinction coefficient |
80,220 - 81,720 (calc based on 28 Y, 7 W, and 12 C residues) |
| edit table |
Domains/Motifs/Modification Sites
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See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.
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Structure
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Structure figures<protect> | ||||||
Notes
Gene Product Resources
See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.
| Resource type | Source | Notes/Reference |
|---|---|---|
| edit table |
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Notes
Accessions in Other Databases
See Help:Gene_accessions for help with entering information into the Gene Accessions table.
| Database | Accession | Notes |
|---|---|---|
|
Escherichia coli str. K-12 substr. MG1655 | ||
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Escherichia coli str. K-12 substr. MG1655 | ||
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Escherichia coli str. K-12 substr. MG1655 | ||
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Escherichia coli str. K-12 substr. MG1655 | ||
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Escherichia coli str. K-12 substr. MG1655 | ||
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Escherichia coli str. K-12 substr. MG1655 | ||
|
Escherichia coli str. K-12 substr. MG1655 | ||
|
Escherichia coli str. K-12 substr. MG1655 | ||
|
Escherichia coli str. K-12 substr. MG1655 | ||
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Notes
Links
| Name | URL | Comments |
|---|---|---|
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References
See Help:References for how to manage references in EcoliWiki.
- ↑ 1.0 1.1 1.2 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
- ↑ 5.0 5.1 Finn, RD et al. (2010) The Pfam protein families database. Nucleic Acids Res. 38 D211-22 PubMed
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