caiC:Evolution

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Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Caenorhabditis briggsae

  • WBGene00023673 (score: 1.000; bootstrap: 62%)
  • WBGene00026207 (score: 0.399)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00009218 (score: 1.000; bootstrap: 67%)
  • WBGene00017012 (score: 0.416)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000025707 (score: 1.000; bootstrap: 56%)
  • ENSCAFP00000001025 (score: 0.393)
  • ENSCAFP00000022190 (score: 0.358)
  • ENSCAFP00000003428 (score: 0.342)
  • ENSCAFP00000022577 (score: 0.244)
  • ENSCAFP00000029725 (score: 0.237)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-050706-104 (score: 1.000; bootstrap: 97%)
  • ZDB-CDNA-050706-41 (score: 1.000; bootstrap: 97%)
  • ZDB-CDNA-041212-76 (score: 0.512)
  • ZDB-GENE-041212-67 (score: 0.512)
  • ZDB-CDNA-050417-249 (score: 0.262)
  • ZDB-GENE-050417-248 (score: 0.262)
  • ZDB-CDNA-050320-112 (score: 0.246)
  • ZDB-GENE-050320-112 (score: 0.246)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0205849 (score: 1.000; bootstrap: 89%)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000000239 (score: 1.000; bootstrap: 56%)
  • ENSGALP00000022652 (score: 0.263)
  • ENSGALP00000007948 (score: 0.245)
  • ENSGALP00000021686 (score: 0.209)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000004721 (score: 1.000; bootstrap: 65%)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YBR222C (score: 1.000; bootstrap: 89%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000137549 (score: 1.000; bootstrap: 77%)
  • NEWSINFRUP00000130941 (score: 0.563)
  • NEWSINFRUP00000161913 (score: 0.547)
  • NEWSINFRUP00000157971 (score: 0.359)
  • NEWSINFRUP00000181817 (score: 0.303)
  • NEWSINFRUP00000151747 (score: 0.262)
  • NEWSINFRUP00000176592 (score: 0.145)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00018048001 (score: 1.000; bootstrap: 67%)
  • GSTENP00018016001 (score: 0.512)
  • GSTENP00025601001 (score: 0.366)
  • GSTENP00004594001 (score: 0.333)
  • GSTENP00025600001 (score: 0.332)
  • GSTENP00005731001 (score: 0.311)
  • GSTENP00024733001 (score: 0.163)
  • GSTENP00034356001 (score: 0.129)

From Inparanoid:20070104

Shigella flexneri

CAIC

From SHIGELLACYC

E. coli O157

CAIC

From ECOO157CYC


Do-It-Yourself Web Tools

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Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF00501 AMP-binding enzyme

Panther (EcoliWiki Page)

PTHR24096:SF39

Superfamily (EcoliWiki Page)

SUPERFAMILY:56801

EcoCyc

EcoCyc:EG11558

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG11558

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120001511

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB1519

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0000133

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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