ymfJ:Evolution - Revision history

127.0.0.1: touch

2013-05-27T08:31:53Z

touch

@@ Line 29: / Line 29: @@
+*
 ****************************************************************************************** -->{{Evolution_homologs_table_help}}
-{|   id="Q46abb8736e0cd"  class=" tableEdit Evolution_homologs_table"
+{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="Q46abb8736e0cd"  class=" tableEdit Evolution_homologs_table"
 |- {{table heading style}}
 !|Organism!!Homologs (Statistics)!!Comments
@@ Line 65: / Line 65: @@
+*
 ****************************************************************************************** -->{{Gene_accessions_help}}
-{|   id="X46abb8740bb8f"  class=" tableEdit Gene_accessions_table"
+{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="X46abb8740bb8f"  class=" tableEdit Gene_accessions_table"
 |- {{table_heading_style}}
 !|Database!!Accession!!Notes
 |- class="tableEdit_footer"
@@ Line 87: / Line 122: @@
+*
 ****************************************************************************************** -->
-{|   id="O46a80447c99de"  class=" tableEdit Links_table"
+{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="O46a80447c99de"  class=" tableEdit Links_table"
 |- {{table_heading_style}}
 !|Name!!URL!!Comments

127.0.0.1: deleting Pfam from accessions table on evolution pages

2010-10-26T18:36:25Z

deleting Pfam from accessions table on evolution pages

← Older revision		Revision as of 18:36, 26 October 2010
Line 68:		Line 68:
	\|- {{table_heading_style}}		\|- {{table_heading_style}}
	!\|Database!!Accession!!Notes		!\|Database!!Accession!!Notes
	\|-
	\|
	~~[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM\|EcoliWiki Page]])~~
	\|
	~~[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc? PFAM:]~~
	\|


	\|- class="tableEdit_footer"		\|- class="tableEdit_footer"

127.0.0.1: /Volumes/r3/t3/ul/working/touchTables/touch_all_tables.php

2010-06-18T00:11:21Z

/Volumes/r3/t3/ul/working/touchTables/touch_all_tables.php

← Older revision		Revision as of 00:11, 18 June 2010
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	****************************************************************************************** -->{{Evolution_homologs_table_help}}		****************************************************************************************** -->{{Evolution_homologs_table_help}}
	{\| id="Q46abb8736e0cd" class=" tableEdit Evolution_homologs_table"		{\| id="Q46abb8736e0cd" class=" tableEdit Evolution_homologs_table"
	\|-		\|- {{table heading style}}
	!\|Organism!!Homologs (Statistics)!!Comments		!\|Organism!!Homologs (Statistics)!!Comments
	\|-		\|-
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	****************************************************************************************** -->{{Gene_accessions_help}}		****************************************************************************************** -->{{Gene_accessions_help}}
	{\| id="X46abb8740bb8f" class=" tableEdit Gene_accessions_table"		{\| id="X46abb8740bb8f" class=" tableEdit Gene_accessions_table"
	\|-		\|- {{table_heading_style}}
	!\|Database!!Accession!!Notes		!\|Database!!Accession!!Notes
	\|-		\|-
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	****************************************************************************************** -->		****************************************************************************************** -->
	{\| id="O46a80447c99de" class=" tableEdit Links_table"		{\| id="O46a80447c99de" class=" tableEdit Links_table"
	\|-		\|- {{table_heading_style}}
	!\|Name!!URL!!Comments		!\|Name!!URL!!Comments

127.0.0.1: Update TableEdit tables.

2010-01-10T02:48:48Z

Update TableEdit tables.

← Older revision		Revision as of 02:48, 10 January 2010
Line 29:		Line 29:
	*		*
	****************************************************************************************** -->{{Evolution_homologs_table_help}}		****************************************************************************************** -->{{Evolution_homologs_table_help}}
	{\|~~class = 'sortable' border~~="2" ~~cellpadding~~="~~4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;~~"		{\| id="Q46abb8736e0cd" class=" tableEdit Evolution_homologs_table"
	\|- ~~{{table heading style}}~~		\|-
	!\|Organism!!Homologs (Statistics)!!Comments		!\|Organism!!Homologs (Statistics)!!Comments
	\|-		\|-
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	From SHIGELLACYC		From SHIGELLACYC

	\|-class=~~'sortbottom'~~		\|- class="tableEdit_footer"
	\|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.46247.Q46abb8736e0cd&page=46247&pagename={{FULLPAGENAMEE}}&type=&template=Evolution_homologs_table edit table] \|\| \|\|		\|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.46247.Q46abb8736e0cd&page=46247&pagename={{FULLPAGENAMEE}}&type=&template=Evolution_homologs_table edit table]</span> \|\| \|\|
	\|}		\|}
	<!--box uid=421aa90e079fa326b6494f812ad13e79.46247.Q46abb8736e0cd-->		<!--box uid=421aa90e079fa326b6494f812ad13e79.46247.Q46abb8736e0cd-->
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	*		*
	****************************************************************************************** -->{{Gene_accessions_help}}		****************************************************************************************** -->{{Gene_accessions_help}}
	{\|~~class = 'sortable' border~~="2" ~~cellpadding~~="~~4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;~~"		{\| id="X46abb8740bb8f" class=" tableEdit Gene_accessions_table"
	\|- ~~{{table_heading_style}}~~		\|-
	!\|Database!!Accession!!Notes		!\|Database!!Accession!!Notes
	\|-		\|-
Line 76:		Line 76:


	\|-class=~~'sortbottom'~~		\|- class="tableEdit_footer"
	\|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.46247.X46abb8740bb8f&page=46247&pagename={{FULLPAGENAMEE}}&type=0&template=Gene_accessions_table edit table] \|\| \|\|		\|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.46247.X46abb8740bb8f&page=46247&pagename={{FULLPAGENAMEE}}&type=0&template=Gene_accessions_table edit table]</span> \|\| \|\|
	\|}		\|}
	<!--box uid=421aa90e079fa326b6494f812ad13e79.46247.X46abb8740bb8f-->		<!--box uid=421aa90e079fa326b6494f812ad13e79.46247.X46abb8740bb8f-->
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	*		*
	****************************************************************************************** -->		****************************************************************************************** -->
	{\|~~class = 'sortable' border~~="2" ~~cellpadding~~="~~4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;~~"		{\| id="O46a80447c99de" class=" tableEdit Links_table"
	\|- ~~{{table_heading_style}}~~		\|-
	!\|Name!!URL!!Comments		!\|Name!!URL!!Comments

	\|-class=~~'sortbottom'~~		\|- class="tableEdit_footer"
	\|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.46247.O46a80447c99de&page=46247&pagename={{FULLPAGENAMEE}}&type=0&template=Links_table edit table] \|\| \|\|		\|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.46247.O46a80447c99de&page=46247&pagename={{FULLPAGENAMEE}}&type=0&template=Links_table edit table]</span> \|\| \|\|
	\|}		\|}
	<!--box uid=421aa90e079fa326b6494f812ad13e79.46247.O46a80447c99de-->		<!--box uid=421aa90e079fa326b6494f812ad13e79.46247.O46a80447c99de-->

127.0.0.1: Fixing references section.

2009-06-26T23:02:59Z

Fixing references section.

← Older revision		Revision as of 23:02, 26 June 2009
Line 106:		Line 106:
	==References==		==References==
	{{BacktoTop}}		{{BacktoTop}}
			{{RefHelp}}
	<references/>		<references />
	~~<noinclude~~>
	__NOTOC__		__NOTOC__
	~~</noinclude>~~
	===Categories===		===Categories===
	{{BacktoTop}}		{{BacktoTop}}
	[[Category:Genes with homologs in Shigella flexneri ]]		[[Category:Genes with homologs in Shigella flexneri ]]

imported>Wikientrybot: Move help links into the tag inside templates.

2009-02-16T21:17:23Z

Move help links into the <above> tag inside templates.

← Older revision	Revision as of 21:17, 16 February 2009
(No difference)

imported>Wikientrybot: Move help links into the tag inside templates.

2009-02-06T08:14:23Z

Move help links into the <above> tag inside templates.

← Older revision	Revision as of 08:14, 6 February 2009
(No difference)

imported>Wikientrybot: Move help links into the tag inside templates.

2009-01-21T21:47:47Z

Move help links into the <above> tag inside templates.

← Older revision		Revision as of 21:47, 21 January 2009
Line 25:		Line 25:
	<!--		<!--
	******************************************************************************************		******************************************************************************************
	*		*
	* PLEASE DON'T EDIT THIS TABLE DIRECTLY. Use the edit table link under the table.		* PLEASE DON'T EDIT THIS TABLE DIRECTLY. Use the edit table link under the table.
	*		*
	****************************************************************************************** -->		****************************************************************************************** -->{{Evolution_homologs_table_help}}
	{\|class = 'sortable' ~~{{Prettytable}} id~~=~~'208883'~~		{\|class = 'sortable' border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"
	\|- {{table heading style}}		\|- {{table heading style}}
	!Organism!!Homologs (Statistics)!!Comments		!\|Organism!!Homologs (Statistics)!!Comments
	\|-		\|-
	\|		\|
	''Shigella flexneri''		''Shigella flexneri''
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	\|		\|
	From SHIGELLACYC		From SHIGELLACYC

	\|-class='sortbottom'		\|-class='sortbottom'
	\|[{{SERVER}}{{SCRIPTPATH}}~~/index.php~~?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.46247.Q46abb8736e0cd&page=46247&pagename={{FULLPAGENAMEE}} edit table] \|\| \|\|		\|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.46247.Q46abb8736e0cd&page=46247&pagename={{FULLPAGENAMEE}}&type=&template=Evolution_homologs_table edit table] \|\| \|\|
	\|}		\|}
	<!--box uid=421aa90e079fa326b6494f812ad13e79.46247.Q46abb8736e0cd-->		<!--box uid=421aa90e079fa326b6494f812ad13e79.46247.Q46abb8736e0cd-->
	~~{{Evolution_homologs_table_help}}~~

	===Do-It-Yourself Web Tools===		===Do-It-Yourself Web Tools===
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	<!--		<!--
	******************************************************************************************		******************************************************************************************
	*		*
	* PLEASE DON'T EDIT THIS TABLE DIRECTLY. Use the edit table link under the table.		* PLEASE DON'T EDIT THIS TABLE DIRECTLY. Use the edit table link under the table.
	*		*
	****************************************************************************************** -->		****************************************************************************************** -->{{Gene_accessions_help}}
	{\|class = 'sortable' ~~{{Prettytable}} id~~=~~'208884'~~		{\|class = 'sortable' border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"
	\|- {{table_heading_style}}		\|- {{table_heading_style}}
	!Database!!Accession!!Notes		!\|Database!!Accession!!Notes
	\|-		\|-
	\|		\|
	[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM\|EcoliWiki Page]])		[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM\|EcoliWiki Page]])
	\|		\|
	[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?\r PFAM:\r]		[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc? PFAM:]
	\|		\|


	\|-class='sortbottom'		\|-class='sortbottom'
	\|[{{SERVER}}{{SCRIPTPATH}}~~/index.php~~?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.46247.X46abb8740bb8f&page=46247&pagename={{FULLPAGENAMEE}} edit table] \|\| \|\|		\|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.46247.X46abb8740bb8f&page=46247&pagename={{FULLPAGENAMEE}}&type=0&template=Gene_accessions_table edit table] \|\| \|\|
	\|}		\|}
	<!--box uid=421aa90e079fa326b6494f812ad13e79.46247.X46abb8740bb8f-->		<!--box uid=421aa90e079fa326b6494f812ad13e79.46247.X46abb8740bb8f-->
	~~{{Evolution_families_table_help}}~~
	<protect><!--Families_notes--></protect>		<protect><!--Families_notes--></protect>
	===Notes===		===Notes===
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	<!--		<!--
	******************************************************************************************		******************************************************************************************
	*		*
	* PLEASE DON'T EDIT THIS TABLE DIRECTLY. Use the edit table link under the table.		* PLEASE DON'T EDIT THIS TABLE DIRECTLY. Use the edit table link under the table.
	*		*
	****************************************************************************************** -->		****************************************************************************************** -->
	{\|class = 'sortable' ~~{{Prettytable}} id~~=~~'110365'~~		{\|class = 'sortable' border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"
	\|- {{table_heading_style}}		\|- {{table_heading_style}}
	!Name!!URL!!Comments		!\|Name!!URL!!Comments

	\|-class='sortbottom'		\|-class='sortbottom'
	\|[{{SERVER}}{{SCRIPTPATH}}~~/index.php~~?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.46247.O46a80447c99de&page=46247&pagename={{FULLPAGENAMEE}} edit table] \|\| \|\|		\|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.46247.O46a80447c99de&page=46247&pagename={{FULLPAGENAMEE}}&type=0&template=Links_table edit table] \|\| \|\|
	\|}		\|}
	<!--box uid=421aa90e079fa326b6494f812ad13e79.46247.O46a80447c99de-->		<!--box uid=421aa90e079fa326b6494f812ad13e79.46247.O46a80447c99de-->
	~~{{Links_help}}~~

	==References==		==References==
	{{BacktoTop}}		{{BacktoTop}}
	~~{{RefHelp}}~~
	<references/>		<references/>
	<noinclude>		<noinclude>

127.0.0.1: Edited by wikibot

2008-04-30T10:21:11Z

Edited by wikibot

← Older revision		Revision as of 10:21, 30 April 2008
Line 40:		Line 40:
	From SHIGELLACYC		From SHIGELLACYC
	\|-class='sortbottom'		\|-class='sortbottom'
	\|[{{SERVER}}~~/colipedia~~/index.php?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.46247.Q46abb8736e0cd&page=46247&pagename={{FULLPAGENAMEE}} edit table] \|\| \|\|		\|[{{SERVER}}{{SCRIPTPATH}}/index.php?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.46247.Q46abb8736e0cd&page=46247&pagename={{FULLPAGENAMEE}} edit table] \|\| \|\|
	\|}		\|}
	<!--box uid=421aa90e079fa326b6494f812ad13e79.46247.Q46abb8736e0cd-->		<!--box uid=421aa90e079fa326b6494f812ad13e79.46247.Q46abb8736e0cd-->
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	\|-class='sortbottom'		\|-class='sortbottom'
	\|[{{SERVER}}~~/colipedia~~/index.php?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.46247.X46abb8740bb8f&page=46247&pagename={{FULLPAGENAMEE}} edit table] \|\| \|\|		\|[{{SERVER}}{{SCRIPTPATH}}/index.php?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.46247.X46abb8740bb8f&page=46247&pagename={{FULLPAGENAMEE}} edit table] \|\| \|\|
	\|}		\|}
	<!--box uid=421aa90e079fa326b6494f812ad13e79.46247.X46abb8740bb8f-->		<!--box uid=421aa90e079fa326b6494f812ad13e79.46247.X46abb8740bb8f-->
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	!Name!!URL!!Comments		!Name!!URL!!Comments
	\|-class='sortbottom'		\|-class='sortbottom'
	\|[{{SERVER}}~~/colipedia~~/index.php?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.46247.O46a80447c99de&page=46247&pagename={{FULLPAGENAMEE}} edit table] \|\| \|\|		\|[{{SERVER}}{{SCRIPTPATH}}/index.php?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.46247.O46a80447c99de&page=46247&pagename={{FULLPAGENAMEE}} edit table] \|\| \|\|
	\|}		\|}
	<!--box uid=421aa90e079fa326b6494f812ad13e79.46247.O46a80447c99de-->		<!--box uid=421aa90e079fa326b6494f812ad13e79.46247.O46a80447c99de-->

127.0.0.1: Edited by wikibot

2007-11-14T07:03:28Z

Edited by wikibot

← Older revision		Revision as of 07:03, 14 November 2007
Line 48:		Line 48:
	*[http://130.14.29.110/BLAST/ BLAST]		*[http://130.14.29.110/BLAST/ BLAST]
	*[http://130.14.29.110/BLAST/Blast.cgi?CMD=Web&LAYOUT=TwoWindows&AUTO_FORMAT=Semiauto&ALIGNMENTS=250&ALIGNMENT_VIEW=Pairwise&CLIENT=web&COMPOSITION_BASED_STATISTICS=on&DATABASE=nr&CDD_SEARCH=on&DESCRIPTIONS=500&ENTREZ_QUERY=%28none%29&EXPECT=10&FORMAT_OBJECT=Alignment&FORMAT_TYPE=HTML&I_THRESH=0.005&MATRIX_NAME=BLOSUM62&NCBI_GI=on&PAGE=Proteins&PROGRAM=blastp&RUN_PSIBLAST=on&SERVICE=plain&SET_DEFAULTS.x=36&SET_DEFAULTS.y=5&SHOW_OVERVIEW=on&END_OF_HTTPGET=Yes&SHOW_LINKOUT=yes&GET_SEQUENCE=yes&SEARCH_NAME=psi_bp/ CDD]		*[http://130.14.29.110/BLAST/Blast.cgi?CMD=Web&LAYOUT=TwoWindows&AUTO_FORMAT=Semiauto&ALIGNMENTS=250&ALIGNMENT_VIEW=Pairwise&CLIENT=web&COMPOSITION_BASED_STATISTICS=on&DATABASE=nr&CDD_SEARCH=on&DESCRIPTIONS=500&ENTREZ_QUERY=%28none%29&EXPECT=10&FORMAT_OBJECT=Alignment&FORMAT_TYPE=HTML&I_THRESH=0.005&MATRIX_NAME=BLOSUM62&NCBI_GI=on&PAGE=Proteins&PROGRAM=blastp&RUN_PSIBLAST=on&SERVICE=plain&SET_DEFAULTS.x=36&SET_DEFAULTS.y=5&SHOW_OVERVIEW=on&END_OF_HTTPGET=Yes&SHOW_LINKOUT=yes&GET_SEQUENCE=yes&SEARCH_NAME=psi_bp/ CDD]
	*[http://inparanoid.sbc.su.se/cgi-bin/~~eid_search~~.pl?id=NP_415662&idtype=all&~~start~~=on&~~species~~=~~All~~&~~conf~~=0.05 InParanoid]		*[http://inparanoid.sbc.su.se/cgi-bin/gene_search.cgi?id=NP_415662&idtype=all&all_or_selection=all&specieslist=1&scorelimit=0.05&.submit=Submit&.cgifields=specieslist&.cgifields=idtype&.cgifields=all_or_selection InParanoid]
	*[http://www.sanger.ac.uk/PostGenomics/S_pombe/YOGY/ YOGY]		*[http://www.sanger.ac.uk/PostGenomics/S_pombe/YOGY/ YOGY]