yadI:Gene - Revision history

127.0.0.1: touch

2013-09-19T20:37:10Z

touch

← Older revision		Revision as of 20:37, 19 September 2013
Line 128:		Line 128:
	\|		\|
	W3110: 144577..145017<br /><gbrowseImage>		W3110: 144577..145017<br /><gbrowseImage>
	name=~~AC_000091~~:144577..145017		name=NC_007779:144577..145017
	source=W3110		source=W3110
	preset=GeneLocation		preset=GeneLocation
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	\|		\|
	{{GBrowseLink\|W3110\|~~AC_000091~~\|143577\|146017\|GBrowse(W3110)}}		{{GBrowseLink\|W3110\|NC_007779\|143577\|146017\|GBrowse(W3110)}}
	\|		\|
	{{GBrowseFastaLink\|W3110\|~~AC_000091~~\|144577\|145017\|FASTA Dump}}		{{GBrowseFastaLink\|W3110\|NC_007779\|144577\|145017\|FASTA Dump}}
	\|-		\|-
	\|		\|

127.0.0.1: touch

2013-05-27T07:19:06Z

touch

← Older revision		Revision as of 07:19, 27 May 2013
Line 67:		Line 67:
	*		*
	****************************************************************************************** -->{{Gene_location_help}}		****************************************************************************************** -->{{Gene_location_help}}
	{\| id="Z46a9a91604e27" class=" tableEdit Gene_location_table"		{\| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" id="Z46a9a91604e27" class=" tableEdit Gene_location_table"
	\|- {{table_heading_style}}		\|- {{table_heading_style}}
	!\|Strain!!Map location!!Genome coordinates!!Genome browsers!!Sequence links		!\|Strain!!Map location!!Genome coordinates!!Genome browsers!!Sequence links
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	*		*
	****************************************************************************************** -->{{Gene_sequence_features_help}}		****************************************************************************************** -->{{Gene_sequence_features_help}}
	{\| id="R46a9a916a1513" class=" tableEdit Gene_sequence_features_table"		{\| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" id="R46a9a916a1513" class=" tableEdit Gene_sequence_features_table"
	\|- {{table_heading_style}}		\|- {{table_heading_style}}
	!\|Feature Type!!Strain!!Genomic Location!!Evidence!!Reference!!Notes		!\|Feature Type!!Strain!!Genomic Location!!Evidence!!Reference!!Notes
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	*		*
	****************************************************************************************** -->{{Gene_alleles_help}}		****************************************************************************************** -->{{Gene_alleles_help}}
	{\| ~~{{Prettytable}}~~ id="P46a9a916e1bcd" class=" tableEdit Gene_allele_table dataTable"		{\| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" id="P46a9a916e1bcd" class=" tableEdit Gene_allele_table dataTable"
	\|- {{table_heading_style}}		\|- {{table_heading_style}}
	!\|Allele!!Nt change(s)!!AA change(s)!!Phenotype: Type!!Phenotype: Description!!Reference!!Availability!!Comments		!\|Allele!!Nt change(s)!!AA change(s)!!Phenotype: Type!!Phenotype: Description!!Reference!!Availability!!Comments
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	*		*
	****************************************************************************************** -->{{Genetic_interaction_help}}		****************************************************************************************** -->{{Genetic_interaction_help}}
	{\| id="B4e04c5d068bcb" class=" tableEdit Genetic_interaction_table dataTable"		{\| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" id="B4e04c5d068bcb" class=" tableEdit Genetic_interaction_table dataTable"
	\|- {{table_heading_style}}		\|- {{table_heading_style}}
	!\|Interactor!!Interaction!!Allele!!Score(s)!!Reference(s)!!Accessions!!Notes		!\|Interactor!!Interaction!!Allele!!Score(s)!!Reference(s)!!Accessions!!Notes
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	*		*
	****************************************************************************************** -->{{Gene_resources_help}}		****************************************************************************************** -->{{Gene_resources_help}}
	{\| id="B46a9a917906ec" class=" tableEdit Gene_resource_table"		{\| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" id="B46a9a917906ec" class=" tableEdit Gene_resource_table"
	\|- {{table_heading_style}}		\|- {{table_heading_style}}
	!\|Resource!!Resource Type!!Source!!Notes/Reference		!\|Resource!!Resource Type!!Source!!Notes/Reference
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	*		*
	****************************************************************************************** -->{{Gene_accessions_help}}		****************************************************************************************** -->{{Gene_accessions_help}}
	{\| id="W46a9a9182600a" class=" tableEdit Gene_accessions_table"		{\| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" id="W46a9a9182600a" class=" tableEdit Gene_accessions_table"
	\|- {{table_heading_style}}		\|- {{table_heading_style}}
	!\|Database!!Accession!!Notes		!\|Database!!Accession!!Notes
	\|-		\|-
	\|		\|
	~~[http://ecocyc.org EcoCyc] (~~[[EcoCyc~~\|EcoliWiki Page~~]])		[[EcoCyc]]
	\|		\|
	~~[http~~:~~//biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=~~EG12322 ~~ECOCYC:EG12322]~~		EcoCyc:EG12322
	\|		\|
	Escherichia coli str. K-12 substr. MG1655		''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655\|MG1655]]
	\|-		\|-
	\|		\|
	~~[http://ecogene.org EcoGene] (~~[[EcoGene~~\|EcoliWiki Page~~]])		[[EcoGene]]
	\|		\|
	~~[http://ecogene.org/geneinfo.php?eg_id=EG12322~~ EcoGene:EG12322]		EcoGene:EG12322
	\|		\|
	Escherichia coli str. K-12 substr. MG1655		''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655\|MG1655]]
	\|-		\|-
	\|		\|
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	\|		\|
	Escherichia coli str. K-12 substr. MG1655		Escherichia coli str. K-12 substr. MG1655
			\|-
			\|
			[[RegulonDB]]
			\|
			RegulonDB:ECK120002198
			\|
			''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655\|MG1655]]
			\|-
			\|
			[[EchoBASE]]
			\|
			EchoBASE:EB2227
			\|
			''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655\|MG1655]]
			\|-
			\|
			[[ASAP]]
			\|
			ASAP:ABE-0000453
			\|
			''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655\|MG1655]]

	\|- class="tableEdit_footer"		\|- class="tableEdit_footer"
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	*		*
	****************************************************************************************** -->		****************************************************************************************** -->
	{\| id="B46a6764f54c8f" class=" tableEdit Links_table"		{\| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" id="B46a6764f54c8f" class=" tableEdit Links_table"
	\|- {{table_heading_style}}		\|- {{table_heading_style}}
	!\|Name!!URL!!Comments		!\|Name!!URL!!Comments

Wameza: Table edited by Wameza via TableEdit

2012-01-17T22:33:00Z

Table edited by Wameza via TableEdit

← Older revision		Revision as of 22:33, 17 January 2012
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	\|-		\|-
	\|		\|
	''~~Δ~~yadI746::kan''		''yadI746(del)::kan''
	\|		\|

Wameza: Table edited by Wameza via TableEdit

2012-01-17T22:31:50Z

Table edited by Wameza via TableEdit

← Older revision		Revision as of 22:31, 17 January 2012
Line 199:		Line 199:
	\|-		\|-
	\|		\|
	~~Δ~~yadI (Keio:JW0125)		''yadI(del) (Keio:JW0125)''
	\|		\|
	deletion		deletion
Line 211:		Line 211:
	PMID:16738554		PMID:16738554
	\|		\|
	[http://www.shigen.nig.ac.jp/ecoli/strain/keioCollectionQueryAction.do Shigen]<br>[http://cgsc2.biology.yale.edu/Strain.php?ID=106683 CGSC8402]<ref name='LIB:cgsc'/>		[http://www.shigen.nig.ac.jp/ecoli/strain/keioCollectionQueryAction.do Shigen]<br />[http://cgsc2.biology.yale.edu/Strain.php?ID=106683 CGSC8402]<ref name='LIB:cgsc'/>
	\|		\|

imported>Wikientrybot: Refreshing information from GenBank record NC_000913

2011-09-22T19:56:48Z

Refreshing information from GenBank record NC_000913

@@ Line 46: / Line 46: @@
 !align=left {{table_heading_style}} |Synonyms
 ||
-''ECK0128, b0129, JW0125, agaX''<ref name='LIB:Riley_2006'/>
+''ECK0128, b0129, JW0125, agaX''<ref name='LIB:Riley_2006'/>, agaX''
 |- class="tableEdit_footer"
@@ Line 349: / Line 349: @@
 |- {{table_heading_style}}
 !|Database!!Accession!!Notes
 |- class="tableEdit_footer"

imported>Wikientrybot: Bulk deleting accessions.

2011-09-21T21:49:53Z

Bulk deleting accessions.

@@ Line 297: / Line 297: @@
+|
 [http://ecoli.aist-nara.ac.jp/GB6/kohara_info.jsp?fword=114 Genobase]
+|
 PMID:3038334
@@ Line 318: / Line 327: @@
+|
 est. P1 cotransduction: 88% <ref name='LIB:Nichols_linked_Tn'/>
 |- class="tableEdit_footer"
@@ Line 349: / Line 349: @@
 |- {{table_heading_style}}
 !|Database!!Accession!!Notes
 |- class="tableEdit_footer"

127.0.0.1: Data loaded by TableEdit_Loader.

2011-09-02T20:06:18Z

Data loaded by TableEdit_Loader.

← Older revision		Revision as of 20:06, 2 September 2011
Line 290:		Line 290:

	Primer 2:CCATACTCATACAAATTATGTTT		Primer 2:CCATACTCATACAAATTATGTTT
			\|-
			\|
			[[:Category:Kohara_Phage:17C11\|17C11]]
			\|
			Kohara Phage
			\|
			[http://ecoli.aist-nara.ac.jp/GB6/kohara_info.jsp?fword=114 Genobase]
			\|
			PMID:3038334
	\|-		\|-
	\|		\|
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	\|-		\|-
	\|		\|
	[[:Category:Kohara_Phage:~~17C11~~\|~~17C11~~]]		[[:Category:Kohara_Phage:11C5\|11C5]]
	\|		\|
	Kohara Phage		Kohara Phage
	\|		\|
	[http://ecoli.aist-nara.ac.jp/GB6/kohara_info.jsp?fword=~~114~~ Genobase]		[http://ecoli.aist-nara.ac.jp/GB6/kohara_info.jsp?fword=115 Genobase]
	\|		\|
	PMID:3038334		PMID:3038334

127.0.0.1: Data loaded by TableEdit_Loader.

2011-09-02T20:06:10Z

Data loaded by TableEdit_Loader.

← Older revision		Revision as of 20:06, 2 September 2011
Line 309:		Line 309:
	\|		\|
	est. P1 cotransduction: 88% <ref name='LIB:Nichols_linked_Tn'/>		est. P1 cotransduction: 88% <ref name='LIB:Nichols_linked_Tn'/>
			\|-
			\|
			[[:Category:Kohara_Phage:17C11\|17C11]]
			\|
			Kohara Phage
			\|
			[http://ecoli.aist-nara.ac.jp/GB6/kohara_info.jsp?fword=114 Genobase]
			\|
			PMID:3038334

	\|- class="tableEdit_footer"		\|- class="tableEdit_footer"

127.0.0.1: Fixing Gbrowse links (bug #119)

2011-08-17T20:32:11Z

Fixing Gbrowse links (bug #119)

← Older revision		Revision as of 20:32, 17 August 2011
Line 84:		Line 84:
	\|		\|
	*[http://biocyc.org/ECOLI/NEW-IMAGE?type=LOCUS-POSITION&chromosome=COLI-K12&object=EG12322 EcoCyc]		*[http://biocyc.org/ECOLI/NEW-IMAGE?type=LOCUS-POSITION&chromosome=COLI-K12&object=EG12322 EcoCyc]
	{{GBrowseLink\|~~ecoli~~\|NC_000913\|143577\|146017\|GBrowse(MG1655)}}		{{GBrowseLink\|MG1655\|NC_000913\|143577\|146017\|GBrowse(MG1655)}}

	\|		\|
	{{GBrowseFastaLink\|~~ecoli~~\|NC_000913\|144577\|145017\|FASTA Dump}}		{{GBrowseFastaLink\|MG1655\|NC_000913\|144577\|145017\|FASTA Dump}}
	*[http://biocyc.org/ECOLI/sequence?object=EG12322 EcoCyc Sequence Dump]		*[http://biocyc.org/ECOLI/sequence?object=EG12322 EcoCyc Sequence Dump]
	\|-		\|-
Line 118:		Line 118:

	\|		\|
	{{GBrowseLink\|BW2952\|~~012759~~\|144576\|~~NC_145016~~\|GBrowse (BW2952)}}		{{GBrowseLink\|BW2952\|NC_012759\|144576\|145016\|GBrowse (BW2952)}}
	\|		\|
	{{GBrowseFastaLink\|BW2952\|~~012759~~\|144576\|~~NC_145016~~\|FASTA Dump}}		{{GBrowseFastaLink\|BW2952\|NC_012759\|144576\|145016\|FASTA Dump}}
	\|-		\|-
	\|		\|
Line 134:		Line 134:

	\|		\|
	{{GBrowseLink\|~~ecoli_W3110~~\|AC_000091\|143577\|146017\|GBrowse(W3110)}}		{{GBrowseLink\|W3110\|AC_000091\|143577\|146017\|GBrowse(W3110)}}
	\|		\|
	{{GBrowseFastaLink\|~~ecoli_W3110~~\|AC_000091\|144577\|145017\|FASTA Dump}}		{{GBrowseFastaLink\|W3110\|AC_000091\|144577\|145017\|FASTA Dump}}
	\|-		\|-
	\|		\|
Line 150:		Line 150:

	\|		\|
	{{GBrowseLink\|~~ecoli_DH10B~~\|NC_010473\|117801\|120001\|GBrowse(DH10B)}}		{{GBrowseLink\|DH10B\|NC_010473\|117801\|120001\|GBrowse(DH10B)}}
	\|		\|
	{{GBrowseFastaLink\|~~ecoli_DH10B~~\|NC_010473\|117801\|120001\|FASTA Dump}}		{{GBrowseFastaLink\|DH10B\|NC_010473\|117801\|120001\|FASTA Dump}}

	\|- class="tableEdit_footer"		\|- class="tableEdit_footer"

127.0.0.1: Edited by wikibot

2011-06-27T16:37:39Z

Edited by wikibot

← Older revision		Revision as of 16:37, 27 June 2011
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	W3110: 144577..145017<br /><gbrowseImage>		W3110: 144577..145017<br /><gbrowseImage>
	name=AC_000091:144577..145017		name=AC_000091:144577..145017
	source=~~MG1655_W3110~~		source=W3110
	preset=GeneLocation		preset=GeneLocation
	</gbrowseImage>		</gbrowseImage>