tqsA:Gene Product(s) - Revision history

Saleksander: Table edited by Saleksander via TableEdit

2015-06-08T18:38:25Z

Table edited by Saleksander via TableEdit

← Older revision		Revision as of 18:38, 8 June 2015
Line 255:		Line 255:
	GO:0005887		GO:0005887
	\|		\|
	integral to plasma membrane		integral component of plasma membrane
	\|		\|
	PMID:16385049		PMID:16385049
	\|		\|
	~~ISS~~: Inferred from Sequence ~~or Structural Similarity~~		ISM: Inferred from Sequence Model
	\|		\|

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	C		C
	\|		\|
	Fig. 4 shows predicted topology in plasma membrane.		Fig. 4 shows predicted topology in plasma membrane, using the prediction programs MEMSTAT-2, TMHMM, and PHDhtm
	\|		\|
	Missing: with/from		Missing: with/from

127.0.0.1: touch table

2015-02-17T20:40:24Z

touch table

← Older revision		Revision as of 20:40, 17 February 2015
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	!align=left {{table heading style}} \|Mol. Wt		!align=left {{table heading style}} \|Mol. Wt
	\|\|		\|\|
	~~17 Da~~		37.544 kDa
	\|-		\|-
	!align=left {{table heading style}} \|pI		!align=left {{table heading style}} \|pI
	\|\|		\|\|
	6.1 (calculated)		9.3 (calculated)
	\|-		\|-
	!align=left {{table heading style}} \|Extinction coefficient		!align=left {{table heading style}} \|Extinction coefficient
	\|\|		\|\|
	0 (calc based on 0 Y, 0 W, and 0 C residues)		37,930 - 38,055 (calc based on 7 Y, 5 W, and 1 C residues)

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127.0.0.1: touch

2013-10-05T16:32:36Z

touch

← Older revision		Revision as of 16:32, 5 October 2013
Line 443:		Line 443:
	View models at:		View models at:
	* [http://www.proteinmodelportal.org/query/uniprot/P0AFS5 Protein Model Portal]		* [http://www.proteinmodelportal.org/query/uniprot/P0AFS5 Protein Model Portal]
	* [http://bioinf.cs.ucl.ac.uk/~~psipred~~/ PSI-PRED]		* [http://bioinf.cs.ucl.ac.uk/genome3d/read?uniprot_id=P0AFS5 PSI-PRED (P0AFS5)]
	* [http://spock.genes.nig.ac.jp/~genome/~~search~~.~~html~~ Genomes TO Protein] (GTOP)		* [http://spock.genes.nig.ac.jp/~genome/cgi-bin/gkeytext.pl.cgi?A&QUERY1=P0AFS5 Genomes TO Protein (P0AFS5)] (GTOP)

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127.0.0.1: touch

2013-10-05T15:59:09Z

touch

← Older revision		Revision as of 15:59, 5 October 2013
Line 362:		Line 362:
	!align=left {{table heading style}} \|Mol. Wt		!align=left {{table heading style}} \|Mol. Wt
	\|\|		\|\|
	~~37.544 kDa~~		17 Da
	\|-		\|-
	!align=left {{table heading style}} \|pI		!align=left {{table heading style}} \|pI
	\|\|		\|\|
	9.3 (calculated)		6.1 (calculated)
	\|-		\|-
	!align=left {{table heading style}} \|Extinction coefficient		!align=left {{table heading style}} \|Extinction coefficient
	\|\|		\|\|
	~~37,930 - 38,055~~ (calc based on 7 Y, 5 W, and 1 C residues)		0 (calc based on 0 Y, 0 W, and 0 C residues)

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127.0.0.1: touch

2013-05-27T07:49:13Z

touch

← Older revision		Revision as of 07:49, 27 May 2013
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	*		*
	****************************************************************************************** -->{{Product_GO_help}}		****************************************************************************************** -->{{Product_GO_help}}
	{\| id="R46aa7120cf377" class=" tableEdit GO_table_product dataTable"		{\| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" id="R46aa7120cf377" class=" tableEdit GO_table_product dataTable"
	\|- {{table_heading_style}}		\|- {{table_heading_style}}
	!\|Qualifier!!GO ID!!GO term name!!Reference!!Evidence Code!!with/from!!Aspect!!Notes!!Status		!\|Qualifier!!GO ID!!GO term name!!Reference!!Evidence Code!!with/from!!Aspect!!Notes!!Status
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	*		*
	****************************************************************************************** -->{{Product_interactions_help}}		****************************************************************************************** -->{{Product_interactions_help}}
	{\| id="C46aa7123f017b" class=" tableEdit Product_interactions_table dataTable"		{\| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" id="C46aa7123f017b" class=" tableEdit Product_interactions_table dataTable"
	\|- {{table heading style}}		\|- {{table heading style}}
	!\|Partner Type!!Partner!!Notes!!References!!Evidence		!\|Partner Type!!Partner!!Notes!!References!!Evidence
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	*		*
	****************************************************************************************** -->{{Product_localization_help}}		****************************************************************************************** -->{{Product_localization_help}}
	{\| id="S46a8032de9c02" class=" tableEdit Product_localization_table"		{\| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" id="S46a8032de9c02" class=" tableEdit Product_localization_table"
	\|- {{table heading style}}		\|- {{table heading style}}
	!\|Compartment!!Description!!Evidence!!Reference/Source!!Notes		!\|Compartment!!Description!!Evidence!!Reference/Source!!Notes
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	*		*
	****************************************************************************************** -->{{Product_domains_motifs_help}}		****************************************************************************************** -->{{Product_domains_motifs_help}}
	{\| id="U46aa712635a0b" class=" tableEdit Product_motif_table dataTable"		{\| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" id="U46aa712635a0b" class=" tableEdit Product_motif_table dataTable"
	\|- {{table heading style}}		\|- {{table heading style}}
	!\|Type!!Residues!!Description!!Notes!!References		!\|Type!!Residues!!Description!!Notes!!References
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	*		*
	****************************************************************************************** -->{{Product_resources_help}}		****************************************************************************************** -->{{Product_resources_help}}
	{\| id="S46aa7126dfd7a" class=" tableEdit Product_resource_table"		{\| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" id="S46aa7126dfd7a" class=" tableEdit Product_resource_table"
	\|- {{table_heading_style}}		\|- {{table_heading_style}}
	!\|Resource type!!Source!!Notes/Reference		!\|Resource type!!Source!!Notes/Reference
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	*		*
	****************************************************************************************** -->{{Gene_accessions_help}}		****************************************************************************************** -->{{Gene_accessions_help}}
	{\| id="E46aa71273fb1f" class=" tableEdit Gene_accessions_table"		{\| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" id="E46aa71273fb1f" class=" tableEdit Gene_accessions_table"
	\|- {{table_heading_style}}		\|- {{table_heading_style}}
	!\|Database!!Accession!!Notes		!\|Database!!Accession!!Notes
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	\|-		\|-
	\|		\|
	~~[https://asap.ahabs.wisc.edu/asap/logon.php ASAP] (~~[[ASAP~~\|EcoliWiki Page~~]])		[[ASAP]]
	\|		\|
	~~[http://asap.ahabs.wisc.edu/asap/feature_info.php?LocationID=WIS&FeatureID=0005350&formSubmitReturn=1~~ ASAP:ABE-0005350]		ASAP:ABE-0005350
	\|		\|
	Escherichia coli str. K-12 substr. MG1655		''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655\|MG1655]]
	\|-		\|-
	\|		\|
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	\|-		\|-
	\|		\|
	~~[http://ecocyc.org EcoCyc] (~~[[EcoCyc~~\|EcoliWiki Page~~]])		[[EcoCyc]]
	\|		\|
	~~[http~~:~~//biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=~~G6859 ~~ECOCYC:G6859]~~		EcoCyc:G6859
	\|		\|
	Escherichia coli str. K-12 substr. MG1655		''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655\|MG1655]]
	\|-		\|-
	\|		\|
	~~[http://ecogene.org EcoGene] (~~[[EcoGene~~\|EcoliWiki Page~~]])		[[EcoGene]]
	\|		\|
	~~[http://ecogene.org/geneinfo.php?eg_id=EG13928~~ EcoGene:EG13928]		EcoGene:EG13928
	\|		\|
	Escherichia coli str. K-12 substr. MG1655		''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655\|MG1655]]
	\|-		\|-
	\|		\|
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	\|		\|
	Escherichia coli str. K-12 substr. MG1655		Escherichia coli str. K-12 substr. MG1655
			\|-
			\|
			[[RegulonDB]]
			\|
			RegulonDB:ECK120003448
			\|
			''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655\|MG1655]]
			\|-
			\|
			[[EchoBASE]]
			\|
			EchoBASE:EB3687
			\|
			''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655\|MG1655]]

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	*		*
	****************************************************************************************** -->		****************************************************************************************** -->
	{\| id="N46a803328646c" class=" tableEdit Links_table"		{\| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" id="N46a803328646c" class=" tableEdit Links_table"
	\|- {{table_heading_style}}		\|- {{table_heading_style}}
	!\|Name!!URL!!Comments		!\|Name!!URL!!Comments

imported>Wikientrybot: Refreshing information from GenBank record NC_000913

2011-09-29T20:52:16Z

Refreshing information from GenBank record NC_000913

@@ Line 522: / Line 522: @@
+|
 [http://www.ncbi.nlm.nih.gov/protein/NP_416118.1 GeneID:946142]
+|
 Escherichia coli str. K-12 substr. MG1655

imported>Wikientrybot: Refreshing information from GenBank record NC_000913

2011-09-24T07:37:18Z

Refreshing information from GenBank record NC_000913

← Older revision		Revision as of 07:37, 24 September 2011
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	!align=left {{table heading style}} \|Synonyms		!align=left {{table heading style}} \|Synonyms
	\|\|		\|\|
	predicted inner membrane protein<ref name='LIB:Riley_2006'/>, B1601<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YdgG<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, TqsA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>		''predicted inner membrane protein<ref name='LIB:Riley_2006'/>, B1601<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YdgG<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, TqsA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK1596, JW1593, ydgG, b1601''
	\|-		\|-
	!align=left {{table heading style}} \|Product description		!align=left {{table heading style}} \|Product description
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	\|- {{table_heading_style}}		\|- {{table_heading_style}}
	!\|Database!!Accession!!Notes		!\|Database!!Accession!!Notes
			\|-
			\|
			[http://www.ncbi.nlm.nih.gov/protein NCBI (Protein)] ([[NCBI (Protein)\|EcoliWiki Page]])
			\|
			[http://www.ncbi.nlm.nih.gov/protein/16129559 GI:16129559]
			\|
			Escherichia coli str. K-12 substr. MG1655
			\|-
			\|
			[http://www.ncbi.nlm.nih.gov/protein NCBI (Protein)] ([[NCBI (Protein)\|EcoliWiki Page]])
			\|
			[http://www.ncbi.nlm.nih.gov/protein/NP_416118.1 GeneID:946142]
			\|
			Escherichia coli str. K-12 substr. MG1655

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imported>Wikientrybot: Bulk deleting accessions.

2011-09-21T21:41:33Z

Bulk deleting accessions.

@@ Line 510: / Line 510: @@
 |- {{table_heading_style}}
 !|Database!!Accession!!Notes
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127.0.0.1: /Volumes/r3/t3/ul/phpwikibots/trunk/touch_all_product_tables.php

2011-08-25T03:25:28Z

/Volumes/r3/t3/ul/phpwikibots/trunk/touch_all_product_tables.php

← Older revision		Revision as of 03:25, 25 August 2011
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	{\| id="S46a8032de9c02" class=" tableEdit Product_localization_table"		{\| id="S46a8032de9c02" class=" tableEdit Product_localization_table"
	\|- {{table heading style}}		\|- {{table heading style}}
	!\|Compartment!!Description!!Evidence!!Source!!Notes		!\|Compartment!!Description!!Evidence!!Reference/Source!!Notes
	\|-		\|-
	\|		\|
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	!align=left {{table heading style}} \|Length		!align=left {{table heading style}} \|Length
	\|\|		\|\|
			344
	\|-		\|-
	!align=left {{table heading style}} \|Mol. Wt		!align=left {{table heading style}} \|Mol. Wt
	\|\|		\|\|
			37.544 kDa
	\|-		\|-
	!align=left {{table heading style}} \|pI		!align=left {{table heading style}} \|pI
	\|\|		\|\|
			9.3 (calculated)
	\|-		\|-
	!align=left {{table heading style}} \|Extinction coefficient		!align=left {{table heading style}} \|Extinction coefficient
	\|\|		\|\|
			37,930 - 38,055 (calc based on 7 Y, 5 W, and 1 C residues)

	\|- class="tableEdit_footer"		\|- class="tableEdit_footer"

127.0.0.1: Updating product models

2011-08-17T16:59:31Z

Updating product models

← Older revision		Revision as of 16:59, 17 August 2011
Line 442:		Line 442:
	\|\|		\|\|
	View models at:		View models at:
	* [http://~~dragon~~.~~bio~~.~~purdue.edu/ecolpredict2/localsearch/cgi-bin~~/~~search3.cgi?q=recA EcoliPredict]~~		* [http://www.proteinmodelportal.org/query/uniprot/P0AFS5 Protein Model Portal]
	* [http://~~modbase.compbio.ucsf.edu/modbase-cgi/model_search.cgi?searchmode=default&displaymode=moddetail&searchproperties=ALL&searchvalue=recA&organism=562&organismtext= ModBase~~]
	* [http://bioinf.cs.ucl.ac.uk/psipred/ PSI-PRED]		* [http://bioinf.cs.ucl.ac.uk/psipred/ PSI-PRED]
	* [http://www.ebi.ac.uk/msd-srv/pqs/ Protein Quaternary Structure] (PQS)
	* [http://spock.genes.nig.ac.jp/~genome/search.html Genomes TO Protein] (GTOP)		* [http://spock.genes.nig.ac.jp/~genome/search.html Genomes TO Protein] (GTOP)