lexA:Gene - Revision history

127.0.0.1: touch

2013-09-19T20:51:09Z

touch

← Older revision		Revision as of 20:51, 19 September 2013
Line 128:		Line 128:
	\|		\|
	W3110: 4260705..4261313<br /><gbrowseImage>		W3110: 4260705..4261313<br /><gbrowseImage>
	name=~~AC_000091~~:4260705..4261313		name=NC_007779:4260705..4261313
	source=W3110		source=W3110
	preset=GeneLocation		preset=GeneLocation
Line 134:		Line 134:

	\|		\|
	{{GBrowseLink\|W3110\|~~AC_000091~~\|4259705\|4262313\|GBrowse(W3110)}}		{{GBrowseLink\|W3110\|NC_007779\|4259705\|4262313\|GBrowse(W3110)}}
	\|		\|
	{{GBrowseFastaLink\|W3110\|~~AC_000091~~\|4260705\|4261313\|FASTA Dump}}		{{GBrowseFastaLink\|W3110\|NC_007779\|4260705\|4261313\|FASTA Dump}}
	\|-		\|-
	\|		\|
Line 1,099:		Line 1,099:
	\|-		\|-
	\|		\|
	~~[http://www.ncbi.nlm.nih.gov/gene NCBI] (~~[[~~NCBI\|EcoliWiki Page~~]])		[[RegulonDB]]
	\|		\|
	~~[http~~:~~//www.ncbi.nlm.nih.gov/gene?term=948544 GeneID:948544]~~		RegulonDB:ECK120000526
	\|		\|
	Escherichia coli str. K-12 substr. MG1655		''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655\|MG1655]]
	\|-		\|-
	\|		\|
	[[~~RegulonDB~~]]		[http://www.ncbi.nlm.nih.gov/gene NCBI] ([[NCBI\|EcoliWiki Page]])
	\|		\|
	~~RegulonDB~~:~~ECK120000526~~		[http://www.ncbi.nlm.nih.gov/gene?term=948544 GeneID:948544]
	\|		\|
	''Escherichia coli'' str. K-12 substr. ~~[[:Category:Strain:~~MG1655~~\|MG1655]]~~		Escherichia coli str. K-12 substr. MG1655
	\|-		\|-
	\|		\|

127.0.0.1: touch

2013-05-27T07:34:15Z

touch

← Older revision		Revision as of 07:34, 27 May 2013
Line 67:		Line 67:
	*		*
	****************************************************************************************** -->{{Gene_location_help}}		****************************************************************************************** -->{{Gene_location_help}}
	{\| id="Q46aa058b0e011" class=" tableEdit Gene_location_table"		{\| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" id="Q46aa058b0e011" class=" tableEdit Gene_location_table"
	\|- {{table_heading_style}}		\|- {{table_heading_style}}
	!\|Strain!!Map location!!Genome coordinates!!Genome browsers!!Sequence links		!\|Strain!!Map location!!Genome coordinates!!Genome browsers!!Sequence links
Line 172:		Line 172:
	*		*
	****************************************************************************************** -->{{Gene_sequence_features_help}}		****************************************************************************************** -->{{Gene_sequence_features_help}}
	{\| id="L46aa058bc99aa" class=" tableEdit Gene_sequence_features_table"		{\| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" id="L46aa058bc99aa" class=" tableEdit Gene_sequence_features_table"
	\|- {{table_heading_style}}		\|- {{table_heading_style}}
	!\|Feature Type!!Strain!!Genomic Location!!Evidence!!Reference!!Notes		!\|Feature Type!!Strain!!Genomic Location!!Evidence!!Reference!!Notes
Line 968:		Line 968:
	*		*
	****************************************************************************************** -->{{Genetic_interaction_help}}		****************************************************************************************** -->{{Genetic_interaction_help}}
	{\| id="E4e04be5d4dcbe" class=" tableEdit Genetic_interaction_table dataTable"		{\| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" id="E4e04be5d4dcbe" class=" tableEdit Genetic_interaction_table dataTable"
	\|- {{table_heading_style}}		\|- {{table_heading_style}}
	!\|Interactor!!Interaction!!Allele!!Score(s)!!Reference(s)!!Accessions!!Notes		!\|Interactor!!Interaction!!Allele!!Score(s)!!Reference(s)!!Accessions!!Notes
Line 989:		Line 989:
	*		*
	****************************************************************************************** -->{{Gene_resources_help}}		****************************************************************************************** -->{{Gene_resources_help}}
	{\| id="K46aa058cdba1d" class=" tableEdit Gene_resource_table"		{\| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" id="K46aa058cdba1d" class=" tableEdit Gene_resource_table"
	\|- {{table_heading_style}}		\|- {{table_heading_style}}
	!\|Resource!!Resource Type!!Source!!Notes/Reference		!\|Resource!!Resource Type!!Source!!Notes/Reference
Line 1,080:		Line 1,080:
	*		*
	****************************************************************************************** -->{{Gene_accessions_help}}		****************************************************************************************** -->{{Gene_accessions_help}}
	{\| id="A46aa058d892be" class=" tableEdit Gene_accessions_table"		{\| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" id="A46aa058d892be" class=" tableEdit Gene_accessions_table"
	\|- {{table_heading_style}}		\|- {{table_heading_style}}
	!\|Database!!Accession!!Notes		!\|Database!!Accession!!Notes
	\|-		\|-
	\|		\|
	~~[http://ecocyc.org EcoCyc] (~~[[EcoCyc~~\|EcoliWiki Page~~]])		[[EcoCyc]]
	\|		\|
	~~[http~~:~~//biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=~~EG10533 ~~ECOCYC:EG10533]~~		EcoCyc:EG10533
	\|		\|
	Escherichia coli str. K-12 substr. MG1655		''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655\|MG1655]]
	\|-		\|-
	\|		\|
	~~[http://ecogene.org EcoGene] (~~[[EcoGene~~\|EcoliWiki Page~~]])		[[EcoGene]]
	\|		\|
	~~[http://ecogene.org/geneinfo.php?eg_id=EG10533~~ EcoGene:EG10533]		EcoGene:EG10533
	\|		\|
	Escherichia coli str. K-12 substr. MG1655		''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655\|MG1655]]
	\|-		\|-
	\|		\|
Line 1,104:		Line 1,104:
	\|		\|
	Escherichia coli str. K-12 substr. MG1655		Escherichia coli str. K-12 substr. MG1655
			\|-
			\|
			[[RegulonDB]]
			\|
			RegulonDB:ECK120000526
			\|
			''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655\|MG1655]]
			\|-
			\|
			[[EchoBASE]]
			\|
			EchoBASE:EB0528
			\|
			''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655\|MG1655]]
			\|-
			\|
			[[ASAP]]
			\|
			ASAP:ABE-0013241
			\|
			''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655\|MG1655]]

	\|- class="tableEdit_footer"		\|- class="tableEdit_footer"
Line 1,123:		Line 1,144:
	*		*
	****************************************************************************************** -->		****************************************************************************************** -->
	{\| id="D46a71ecf03b0b" class=" tableEdit Links_table"		{\| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" id="D46a71ecf03b0b" class=" tableEdit Links_table"
	\|- {{table_heading_style}}		\|- {{table_heading_style}}
	!\|Name!!URL!!Comments		!\|Name!!URL!!Comments

Wameza: Table edited by Wameza via TableEdit

2013-01-22T17:45:47Z

Table edited by Wameza via TableEdit

← Older revision		Revision as of 17:45, 22 January 2013
Line 942:		Line 942:
	Decrease in spontaneous SOS-induction		Decrease in spontaneous SOS-induction
	\|		\|
	PMID:~~24224554~~		PMID:23224554
	\|		\|
	Parent Strain: SMR6039		Parent Strain: SMR6039

Wameza: Table edited by Wameza via TableEdit

2013-01-18T19:55:39Z

Table edited by Wameza via TableEdit

@@ Line 194: / Line 194: @@
+*
 ****************************************************************************************** -->{{Gene_alleles_help}}
-{| {{Prettytable}}  id="D46aa058c206f8"  class=" tableEdit Gene_allele_table dataTable"
+{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="D46aa058c206f8"  class=" tableEdit Gene_allele_table dataTable"
 |- {{table_heading_style}}
 !|Allele!!Nt change(s)!!AA change(s)!!Phenotype: Type!!Phenotype: Description!!Reference!!Availability!!Comments
@@ Line 930: / Line 930: @@
 fig. 2
 |- class="tableEdit_footer"

Denham: Table edited by Denham via TableEdit

2011-10-06T15:46:12Z

Table edited by Denham via TableEdit

← Older revision		Revision as of 15:46, 6 October 2011
Line 922:		Line 922:
	Sensitivity to		Sensitivity to
	\|		\|
	increases senstitivity to ~~bicyclomycin~~		increases senstitivity to [[Bicyclomycin]]
	\|		\|
	PMID:21183718		PMID:21183718

Denham: Table edited by Denham via TableEdit

2011-09-29T13:00:55Z

Table edited by Denham via TableEdit

← Older revision		Revision as of 13:00, 29 September 2011
Line 914:		Line 914:
	\|-		\|-
	\|		\|
	lexA3 ~~(del)~~ in ~~MDS 42~~		lexA3 in [[MDS42]]
	\|		\|
			deletion
	\|		\|

imported>Wikientrybot: Refreshing information from GenBank record NC_000913

2011-09-24T22:42:26Z

Refreshing information from GenBank record NC_000913

@@ Line 46: / Line 46: @@
 !align=left {{table_heading_style}} |Synonyms
 ||
-''ECK4035, b4043, JW4003, exrA, tsl, umuA''<ref name='LIB:Riley_2006'/>
+''ECK4035, b4043, JW4003, exrA, tsl, umuA''<ref name='LIB:Riley_2006'/>, spr, umuA''
 |- class="tableEdit_footer"
@@ Line 1,065: / Line 1,065: @@
 |- {{table_heading_style}}
 !|Database!!Accession!!Notes
 |- class="tableEdit_footer"

imported>Wikientrybot: Bulk deleting accessions.

2011-09-21T20:35:09Z

Bulk deleting accessions.

@@ Line 1,005: / Line 1,005: @@
+|
 [http://ecoli.aist-nara.ac.jp/GB6/kohara_info.jsp?fword=635 Genobase]
+|
 PMID:3038334
@@ Line 1,034: / Line 1,043: @@
+|
 PMID:4343824
 |- class="tableEdit_footer"
@@ Line 1,065: / Line 1,065: @@
 |- {{table_heading_style}}
 !|Database!!Accession!!Notes
 |- class="tableEdit_footer"

Denham: Table edited by Denham via TableEdit

2011-09-20T13:48:15Z

Table edited by Denham via TableEdit

← Older revision		Revision as of 13:48, 20 September 2011
Line 914:		Line 914:
	\|-		\|-
	\|		\|
	lexA3 (del)		lexA3 (del) in MDS 42
	\|		\|

Denham: Table edited by Denham via TableEdit

2011-09-20T13:47:34Z

Table edited by Denham via TableEdit

← Older revision		Revision as of 13:47, 20 September 2011
Line 911:		Line 911:

	\|		\|

			\|-
			\|
			lexA3 (del)
			\|

			\|

			\|
			Sensitivity to
			\|
			increases senstitivity to bicyclomycin
			\|
			PMID:21183718
			\|

			\|
			fig. 2