glnD:Gene - Revision history

127.0.0.1: touch

2013-09-19T20:37:22Z

touch

← Older revision		Revision as of 20:37, 19 September 2013
Line 128:		Line 128:
	\|		\|
	W3110: 188650..185978<br /><gbrowseImage>		W3110: 188650..185978<br /><gbrowseImage>
	name=~~AC_000091~~:185978..188650		name=NC_007779:185978..188650
	source=W3110		source=W3110
	preset=GeneLocation		preset=GeneLocation
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	\|		\|
	{{GBrowseLink\|W3110\|~~AC_000091~~\|184978\|189650\|GBrowse(W3110)}}		{{GBrowseLink\|W3110\|NC_007779\|184978\|189650\|GBrowse(W3110)}}
	\|		\|
	{{GBrowseFastaLink\|W3110\|~~AC_000091~~\|185978\|188650\|FASTA Dump}}		{{GBrowseFastaLink\|W3110\|NC_007779\|185978\|188650\|FASTA Dump}}
	\|-		\|-
	\|		\|

127.0.0.1: touch

2013-05-27T07:19:20Z

touch

← Older revision		Revision as of 07:19, 27 May 2013
Line 67:		Line 67:
	*		*
	****************************************************************************************** -->{{Gene_location_help}}		****************************************************************************************** -->{{Gene_location_help}}
	{\| id="D46a9a9eacaca9" class=" tableEdit Gene_location_table"		{\| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" id="D46a9a9eacaca9" class=" tableEdit Gene_location_table"
	\|- {{table_heading_style}}		\|- {{table_heading_style}}
	!\|Strain!!Map location!!Genome coordinates!!Genome browsers!!Sequence links		!\|Strain!!Map location!!Genome coordinates!!Genome browsers!!Sequence links
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	*		*
	****************************************************************************************** -->{{Gene_sequence_features_help}}		****************************************************************************************** -->{{Gene_sequence_features_help}}
	{\| id="H46a9a9eb73db4" class=" tableEdit Gene_sequence_features_table"		{\| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" id="H46a9a9eb73db4" class=" tableEdit Gene_sequence_features_table"
	\|- {{table_heading_style}}		\|- {{table_heading_style}}
	!\|Feature Type!!Strain!!Genomic Location!!Evidence!!Reference!!Notes		!\|Feature Type!!Strain!!Genomic Location!!Evidence!!Reference!!Notes
Line 194:		Line 194:
	*		*
	****************************************************************************************** -->{{Gene_alleles_help}}		****************************************************************************************** -->{{Gene_alleles_help}}
	{\| ~~{{Prettytable}}~~ id="H46a9a9ebb47ac" class=" tableEdit Gene_allele_table dataTable"		{\| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" id="H46a9a9ebb47ac" class=" tableEdit Gene_allele_table dataTable"
	\|- {{table_heading_style}}		\|- {{table_heading_style}}
	!\|Allele!!Nt change(s)!!AA change(s)!!Phenotype: Type!!Phenotype: Description!!Reference!!Availability!!Comments		!\|Allele!!Nt change(s)!!AA change(s)!!Phenotype: Type!!Phenotype: Description!!Reference!!Availability!!Comments
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	*		*
	****************************************************************************************** -->{{Genetic_interaction_help}}		****************************************************************************************** -->{{Genetic_interaction_help}}
	{\| id="A4e04bc25741ff" class=" tableEdit Genetic_interaction_table dataTable"		{\| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" id="A4e04bc25741ff" class=" tableEdit Genetic_interaction_table dataTable"
	\|- {{table_heading_style}}		\|- {{table_heading_style}}
	!\|Interactor!!Interaction!!Allele!!Score(s)!!Reference(s)!!Accessions!!Notes		!\|Interactor!!Interaction!!Allele!!Score(s)!!Reference(s)!!Accessions!!Notes
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	*		*
	****************************************************************************************** -->{{Gene_resources_help}}		****************************************************************************************** -->{{Gene_resources_help}}
	{\| id="W46a9a9ec5d063" class=" tableEdit Gene_resource_table"		{\| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" id="W46a9a9ec5d063" class=" tableEdit Gene_resource_table"
	\|- {{table_heading_style}}		\|- {{table_heading_style}}
	!\|Resource!!Resource Type!!Source!!Notes/Reference		!\|Resource!!Resource Type!!Source!!Notes/Reference
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	*		*
	****************************************************************************************** -->{{Gene_accessions_help}}		****************************************************************************************** -->{{Gene_accessions_help}}
	{\| id="A46a9a9ece63ef" class=" tableEdit Gene_accessions_table"		{\| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" id="A46a9a9ece63ef" class=" tableEdit Gene_accessions_table"
	\|- {{table_heading_style}}		\|- {{table_heading_style}}
	!\|Database!!Accession!!Notes		!\|Database!!Accession!!Notes
	\|-		\|-
	\|		\|
	~~[http://ecocyc.org EcoCyc] (~~[[EcoCyc~~\|EcoliWiki Page~~]])		[[EcoCyc]]
	\|		\|
	~~[http~~:~~//biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=~~EG11411 ~~ECOCYC:EG11411]~~		EcoCyc:EG11411
	\|		\|
	Escherichia coli str. K-12 substr. MG1655		''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655\|MG1655]]
	\|-		\|-
	\|		\|
	~~[http://ecogene.org EcoGene] (~~[[EcoGene~~\|EcoliWiki Page~~]])		[[EcoGene]]
	\|		\|
	~~[http://ecogene.org/geneinfo.php?eg_id=EG11411~~ EcoGene:EG11411]		EcoGene:EG11411
	\|		\|
	Escherichia coli str. K-12 substr. MG1655		''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655\|MG1655]]
	\|-		\|-
	\|		\|
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	\|		\|
	Escherichia coli str. K-12 substr. MG1655		Escherichia coli str. K-12 substr. MG1655
			\|-
			\|
			[[RegulonDB]]
			\|
			RegulonDB:ECK120001377
			\|
			''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655\|MG1655]]
			\|-
			\|
			[[EchoBASE]]
			\|
			EchoBASE:EB1383
			\|
			''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655\|MG1655]]
			\|-
			\|
			[[ASAP]]
			\|
			ASAP:ABE-0000568
			\|
			''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655\|MG1655]]

	\|- class="tableEdit_footer"		\|- class="tableEdit_footer"
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	*		*
	****************************************************************************************** -->		****************************************************************************************** -->
	{\| id="B46a677255873f" class=" tableEdit Links_table"		{\| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" id="B46a677255873f" class=" tableEdit Links_table"
	\|- {{table_heading_style}}		\|- {{table_heading_style}}
	!\|Name!!URL!!Comments		!\|Name!!URL!!Comments

Wameza: Table edited by Wameza via TableEdit

2012-01-19T03:35:17Z

Table edited by Wameza via TableEdit

← Older revision		Revision as of 03:35, 19 January 2012
Line 199:		Line 199:
	\|-		\|-
	\|		\|
	~~Δ~~glnD (Keio:JW0162)		''glnD(del) (Keio:JW0162)''
	\|		\|
	deletion		deletion

imported>Wikientrybot: Refreshing information from GenBank record NC_000913

2011-09-22T20:04:43Z

Refreshing information from GenBank record NC_000913

@@ Line 400: / Line 400: @@
 |- {{table_heading_style}}
 !|Database!!Accession!!Notes
 |- class="tableEdit_footer"

imported>Wikientrybot: Bulk deleting accessions.

2011-09-21T20:14:46Z

Bulk deleting accessions.

@@ Line 348: / Line 348: @@
+|
 [http://ecoli.aist-nara.ac.jp/GB6/kohara_info.jsp?fword=119 Genobase]
+|
 PMID:3038334
@@ Line 369: / Line 378: @@
 est. P1 cotransduction: 13% <ref name='LIB:Nichols_linked_Tn'/> <br />
 Synonyms:zae-502::Tn10
 |- class="tableEdit_footer"
@@ Line 400: / Line 400: @@
 |- {{table_heading_style}}
 !|Database!!Accession!!Notes
 |- class="tableEdit_footer"

127.0.0.1: Data loaded by TableEdit_Loader.

2011-09-02T20:07:31Z

Data loaded by TableEdit_Loader.

← Older revision		Revision as of 20:07, 2 September 2011
Line 341:		Line 341:

	Primer 2:CCCCCTTTATCGTTTGGATTGAG		Primer 2:CCCCCTTTATCGTTTGGATTGAG
			\|-
			\|
			[[:Category:Kohara_Phage:21C8\|21C8]]
			\|
			Kohara Phage
			\|
			[http://ecoli.aist-nara.ac.jp/GB6/kohara_info.jsp?fword=119 Genobase]
			\|
			PMID:3038334
	\|-		\|-
	\|		\|
Line 362:		Line 371:
	\|-		\|-
	\|		\|
	[[:Category:Kohara_Phage:~~21C8~~\|~~21C8~~]]		[[:Category:Kohara_Phage:12D5\|12D5]]
	\|		\|
	Kohara Phage		Kohara Phage
	\|		\|
	[http://ecoli.aist-nara.ac.jp/GB6/kohara_info.jsp?fword=~~119~~ Genobase]		[http://ecoli.aist-nara.ac.jp/GB6/kohara_info.jsp?fword=120 Genobase]
	\|		\|
	PMID:3038334		PMID:3038334

127.0.0.1: Data loaded by TableEdit_Loader.

2011-09-02T20:07:22Z

Data loaded by TableEdit_Loader.

← Older revision		Revision as of 20:07, 2 September 2011
Line 360:		Line 360:
	est. P1 cotransduction: 13% <ref name='LIB:Nichols_linked_Tn'/> <br />		est. P1 cotransduction: 13% <ref name='LIB:Nichols_linked_Tn'/> <br />
	Synonyms:zae-502::Tn10		Synonyms:zae-502::Tn10
			\|-
			\|
			[[:Category:Kohara_Phage:21C8\|21C8]]
			\|
			Kohara Phage
			\|
			[http://ecoli.aist-nara.ac.jp/GB6/kohara_info.jsp?fword=119 Genobase]
			\|
			PMID:3038334

	\|- class="tableEdit_footer"		\|- class="tableEdit_footer"

127.0.0.1: Fixing Gbrowse links (bug #119)

2011-08-17T20:01:07Z

Fixing Gbrowse links (bug #119)

← Older revision		Revision as of 20:01, 17 August 2011
Line 84:		Line 84:
	\|		\|
	*[http://biocyc.org/ECOLI/NEW-IMAGE?type=LOCUS-POSITION&chromosome=COLI-K12&object=EG11411 EcoCyc]		*[http://biocyc.org/ECOLI/NEW-IMAGE?type=LOCUS-POSITION&chromosome=COLI-K12&object=EG11411 EcoCyc]
	{{GBrowseLink\|~~ecoli~~\|NC_000913\|184978\|189650\|GBrowse(MG1655)}}		{{GBrowseLink\|MG1655\|NC_000913\|184978\|189650\|GBrowse(MG1655)}}

	\|		\|
	{{GBrowseFastaLink\|~~ecoli~~\|NC_000913\|185978\|188650\|FASTA Dump}}		{{GBrowseFastaLink\|MG1655\|NC_000913\|185978\|188650\|FASTA Dump}}
	*[http://biocyc.org/ECOLI/sequence?object=EG11411 EcoCyc Sequence Dump]		*[http://biocyc.org/ECOLI/sequence?object=EG11411 EcoCyc Sequence Dump]
	\|-		\|-
Line 118:		Line 118:

	\|		\|
	{{GBrowseLink\|BW2952\|~~012759~~\|185977\|~~NC_188649~~\|GBrowse (BW2952)}}		{{GBrowseLink\|BW2952\|NC_012759\|185977\|188649\|GBrowse (BW2952)}}
	\|		\|
	{{GBrowseFastaLink\|BW2952\|~~012759~~\|185977\|~~NC_188649~~\|FASTA Dump}}		{{GBrowseFastaLink\|BW2952\|NC_012759\|185977\|188649\|FASTA Dump}}
	\|-		\|-
	\|		\|
Line 134:		Line 134:

	\|		\|
	{{GBrowseLink\|~~ecoli_W3110~~\|AC_000091\|184978\|189650\|GBrowse(W3110)}}		{{GBrowseLink\|W3110\|AC_000091\|184978\|189650\|GBrowse(W3110)}}
	\|		\|
	{{GBrowseFastaLink\|~~ecoli_W3110~~\|AC_000091\|185978\|188650\|FASTA Dump}}		{{GBrowseFastaLink\|W3110\|AC_000091\|185978\|188650\|FASTA Dump}}
	\|-		\|-
	\|		\|
Line 150:		Line 150:

	\|		\|
	{{GBrowseLink\|~~ecoli_DH10B~~\|NC_010473\|154738\|168098\|GBrowse(DH10B)}}		{{GBrowseLink\|DH10B\|NC_010473\|154738\|168098\|GBrowse(DH10B)}}
	\|		\|
	{{GBrowseFastaLink\|~~ecoli_DH10B~~\|NC_010473\|154738\|168098\|FASTA Dump}}		{{GBrowseFastaLink\|DH10B\|NC_010473\|154738\|168098\|FASTA Dump}}

	\|- class="tableEdit_footer"		\|- class="tableEdit_footer"

127.0.0.1: Edited by wikibot

2011-06-27T16:38:20Z

Edited by wikibot

← Older revision		Revision as of 16:38, 27 June 2011
Line 129:		Line 129:
	W3110: 188650..185978<br /><gbrowseImage>		W3110: 188650..185978<br /><gbrowseImage>
	name=AC_000091:185978..188650		name=AC_000091:185978..188650
	source=~~MG1655_W3110~~		source=W3110
	preset=GeneLocation		preset=GeneLocation
	</gbrowseImage>		</gbrowseImage>

127.0.0.1: Edited by wikibot

2011-06-26T05:00:21Z

Edited by wikibot

← Older revision		Revision as of 05:00, 26 June 2011
Line 145:		Line 145:
	DH10B: 162754..160082<br /><gbrowseImage>		DH10B: 162754..160082<br /><gbrowseImage>
	name=NC_010473:160082..162754		name=NC_010473:160082..162754
	source=~~MG1655_DH10B~~		source=DH10B
	preset=GeneLocation		preset=GeneLocation
	</gbrowseImage>		</gbrowseImage>