fabI:Gene - Revision history

127.0.0.1: touch

2013-09-19T20:30:08Z

touch

← Older revision		Revision as of 20:30, 19 September 2013
Line 128:		Line 128:
	\|		\|
	W3110: 1352753..1351965<br /><gbrowseImage>		W3110: 1352753..1351965<br /><gbrowseImage>
	name=~~AC_000091~~:1351965..1352753		name=NC_007779:1351965..1352753
	source=W3110		source=W3110
	preset=GeneLocation		preset=GeneLocation
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	\|		\|
	{{GBrowseLink\|W3110\|~~AC_000091~~\|1350965\|1353753\|GBrowse(W3110)}}		{{GBrowseLink\|W3110\|NC_007779\|1350965\|1353753\|GBrowse(W3110)}}
	\|		\|
	{{GBrowseFastaLink\|W3110\|~~AC_000091~~\|1351965\|1352753\|FASTA Dump}}		{{GBrowseFastaLink\|W3110\|NC_007779\|1351965\|1352753\|FASTA Dump}}
	\|-		\|-
	\|		\|
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	\|-		\|-
	\|		\|
	~~[http://www.ncbi.nlm.nih.gov/gene NCBI] (~~[[~~NCBI\|EcoliWiki Page~~]])		[[RegulonDB]]
	\|		\|
	~~[http~~:~~//www.ncbi.nlm.nih.gov/gene?term=945870 GeneID:945870]~~		RegulonDB:ECK120001482
	\|		\|
	Escherichia coli str. K-12 substr. MG1655		''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655\|MG1655]]
	\|-		\|-
	\|		\|
	[[~~RegulonDB~~]]		[http://www.ncbi.nlm.nih.gov/gene NCBI] ([[NCBI\|EcoliWiki Page]])
	\|		\|
	~~RegulonDB~~:~~ECK120001482~~		[http://www.ncbi.nlm.nih.gov/gene?term=945870 GeneID:945870]
	\|		\|
	''Escherichia coli'' str. K-12 substr. ~~[[:Category:Strain:~~MG1655~~\|MG1655]]~~		Escherichia coli str. K-12 substr. MG1655
	\|-		\|-
	\|		\|

127.0.0.1: touch

2013-05-27T07:12:48Z

touch

← Older revision		Revision as of 07:12, 27 May 2013
Line 67:		Line 67:
	*		*
	****************************************************************************************** -->{{Gene_location_help}}		****************************************************************************************** -->{{Gene_location_help}}
	{\| id="R46a9c3e2a030c" class=" tableEdit Gene_location_table"		{\| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" id="R46a9c3e2a030c" class=" tableEdit Gene_location_table"
	\|- {{table_heading_style}}		\|- {{table_heading_style}}
	!\|Strain!!Map location!!Genome coordinates!!Genome browsers!!Sequence links		!\|Strain!!Map location!!Genome coordinates!!Genome browsers!!Sequence links
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	*		*
	****************************************************************************************** -->{{Gene_sequence_features_help}}		****************************************************************************************** -->{{Gene_sequence_features_help}}
	{\| id="K46a9c3e34daed" class=" tableEdit Gene_sequence_features_table"		{\| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" id="K46a9c3e34daed" class=" tableEdit Gene_sequence_features_table"
	\|- {{table_heading_style}}		\|- {{table_heading_style}}
	!\|Feature Type!!Strain!!Genomic Location!!Evidence!!Reference!!Notes		!\|Feature Type!!Strain!!Genomic Location!!Evidence!!Reference!!Notes
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	*		*
	****************************************************************************************** -->{{Gene_alleles_help}}		****************************************************************************************** -->{{Gene_alleles_help}}
	{\| ~~{{Prettytable}}~~ id="K46a9c3e38f4f6" class=" tableEdit Gene_allele_table dataTable"		{\| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" id="K46a9c3e38f4f6" class=" tableEdit Gene_allele_table dataTable"
	\|- {{table_heading_style}}		\|- {{table_heading_style}}
	!\|Allele!!Nt change(s)!!AA change(s)!!Phenotype: Type!!Phenotype: Description!!Reference!!Availability!!Comments		!\|Allele!!Nt change(s)!!AA change(s)!!Phenotype: Type!!Phenotype: Description!!Reference!!Availability!!Comments
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	*		*
	****************************************************************************************** -->{{Genetic_interaction_help}}		****************************************************************************************** -->{{Genetic_interaction_help}}
	{\| id="U4e04baa82ffa9" class=" tableEdit Genetic_interaction_table dataTable"		{\| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" id="U4e04baa82ffa9" class=" tableEdit Genetic_interaction_table dataTable"
	\|- {{table_heading_style}}		\|- {{table_heading_style}}
	!\|Interactor!!Interaction!!Allele!!Score(s)!!Reference(s)!!Accessions!!Notes		!\|Interactor!!Interaction!!Allele!!Score(s)!!Reference(s)!!Accessions!!Notes
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	*		*
	****************************************************************************************** -->{{Gene_resources_help}}		****************************************************************************************** -->{{Gene_resources_help}}
	{\| id="Z46a9c3e43d212" class=" tableEdit Gene_resource_table"		{\| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" id="Z46a9c3e43d212" class=" tableEdit Gene_resource_table"
	\|- {{table_heading_style}}		\|- {{table_heading_style}}
	!\|Resource!!Resource Type!!Source!!Notes/Reference		!\|Resource!!Resource Type!!Source!!Notes/Reference
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	*		*
	****************************************************************************************** -->{{Gene_accessions_help}}		****************************************************************************************** -->{{Gene_accessions_help}}
	{\| id="X46a9c3e4cac36" class=" tableEdit Gene_accessions_table"		{\| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" id="X46a9c3e4cac36" class=" tableEdit Gene_accessions_table"
	\|- {{table_heading_style}}		\|- {{table_heading_style}}
	!\|Database!!Accession!!Notes		!\|Database!!Accession!!Notes
	\|-		\|-
	\|		\|
	~~[http://ecocyc.org EcoCyc] (~~[[EcoCyc~~\|EcoliWiki Page~~]])		[[EcoCyc]]
	\|		\|
	~~[http~~:~~//biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=~~EG11528 ~~ECOCYC:EG11528]~~		EcoCyc:EG11528
	\|		\|
	Escherichia coli str. K-12 substr. MG1655		''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655\|MG1655]]
	\|-		\|-
	\|		\|
	~~[http://ecogene.org EcoGene] (~~[[EcoGene~~\|EcoliWiki Page~~]])		[[EcoGene]]
	\|		\|
	~~[http://ecogene.org/geneinfo.php?eg_id=EG11528~~ EcoGene:EG11528]		EcoGene:EG11528
	\|		\|
	Escherichia coli str. K-12 substr. MG1655		''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655\|MG1655]]
	\|-		\|-
	\|		\|
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	\|		\|
	Escherichia coli str. K-12 substr. MG1655		Escherichia coli str. K-12 substr. MG1655
			\|-
			\|
			[[RegulonDB]]
			\|
			RegulonDB:ECK120001482
			\|
			''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655\|MG1655]]
			\|-
			\|
			[[EchoBASE]]
			\|
			EchoBASE:EB1490
			\|
			''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655\|MG1655]]
			\|-
			\|
			[[ASAP]]
			\|
			ASAP:ABE-0004327
			\|
			''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655\|MG1655]]

	\|- class="tableEdit_footer"		\|- class="tableEdit_footer"
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	*		*
	****************************************************************************************** -->		****************************************************************************************** -->
	{\| id="H46a6e15f7f658" class=" tableEdit Links_table"		{\| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" id="H46a6e15f7f658" class=" tableEdit Links_table"
	\|- {{table_heading_style}}		\|- {{table_heading_style}}
	!\|Name!!URL!!Comments		!\|Name!!URL!!Comments

Siegele: Table edited by Siegele via TableEdit

2012-04-20T23:47:56Z

Table edited by Siegele via TableEdit

← Older revision		Revision as of 23:47, 20 April 2012
Line 248:		Line 248:
	''fabI392''(ts)		''fabI392''(ts)
	\|		\|
			C to T at position 1125
	\|		\|
			Ser to Phe at position 241
	\|		\|
	Growth Phenotype		Growth Phenotype
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	[[cgscmutation:7550\|CGSC:7550]]		[[cgscmutation:7550\|CGSC:7550]]
	\|		\|
	originally named ''envM392''		originally named ''envM392''

			sequence of mutation<ref name='PMID:1364817'/>

	\|- class="tableEdit_footer"		\|- class="tableEdit_footer"

Siegele: Table edited by Siegele via TableEdit

2012-04-20T23:39:46Z

Table edited by Siegele via TableEdit

← Older revision		Revision as of 23:39, 20 April 2012
Line 252:		Line 252:

	\|		\|
			Growth Phenotype
	\|		\|
	temperature sensitive		temperature sensitive
	\|		\|
			PMID:4574419

	\|		\|
	[[cgscmutation:7550\|CGSC:7550]]		[[cgscmutation:7550\|CGSC:7550]]
	\|		\|
			originally named ''envM392''

	\|- class="tableEdit_footer"		\|- class="tableEdit_footer"

imported>Wikientrybot: Refreshing information from GenBank record NC_000913

2011-09-24T04:12:40Z

Refreshing information from GenBank record NC_000913

@@ Line 380: / Line 380: @@
 |- {{table_heading_style}}
 !|Database!!Accession!!Notes
 |- class="tableEdit_footer"

imported>Wikientrybot: Bulk deleting accessions.

2011-09-21T20:01:31Z

Bulk deleting accessions.

@@ Line 327: / Line 327: @@
+|
 [http://ecoli.aist-nara.ac.jp/GB6/kohara_info.jsp?fword=255 Genobase]
+|
 PMID:3038334
@@ Line 349: / Line 358: @@
 est. P1 cotransduction: 47% <ref name='LIB:Nichols_linked_Tn'/> <br />
 Synonyms:zci-233::Tn10
 |- class="tableEdit_footer"
@@ Line 380: / Line 380: @@
 |- {{table_heading_style}}
 !|Database!!Accession!!Notes
 |- class="tableEdit_footer"

127.0.0.1: Data loaded by TableEdit_Loader.

2011-09-02T20:35:58Z

Data loaded by TableEdit_Loader.

← Older revision		Revision as of 20:35, 2 September 2011
Line 320:		Line 320:

	Primer 2:CCTTTCAGTTCGAGTTCGTTCAT		Primer 2:CCTTTCAGTTCGAGTTCGTTCAT
			\|-
			\|
			[[:Category:Kohara_Phage:18B6\|18B6]]
			\|
			Kohara Phage
			\|
			[http://ecoli.aist-nara.ac.jp/GB6/kohara_info.jsp?fword=255 Genobase]
			\|
			PMID:3038334
	\|-		\|-
	\|		\|
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	\|-		\|-
	\|		\|
	[[:Category:Kohara_Phage:~~18B6~~\|~~18B6~~]]		[[:Category:Kohara_Phage:E14F6\|E14F6]]
	\|		\|
	Kohara Phage		Kohara Phage
	\|		\|
	[http://ecoli.aist-nara.ac.jp/GB6/kohara_info.jsp?fword=~~255~~ Genobase]		[http://ecoli.aist-nara.ac.jp/GB6/kohara_info.jsp?fword=256 Genobase]
	\|		\|
	PMID:3038334		PMID:3038334

127.0.0.1: Data loaded by TableEdit_Loader.

2011-09-02T20:35:48Z

Data loaded by TableEdit_Loader.

← Older revision		Revision as of 20:35, 2 September 2011
Line 340:		Line 340:
	est. P1 cotransduction: 47% <ref name='LIB:Nichols_linked_Tn'/> <br />		est. P1 cotransduction: 47% <ref name='LIB:Nichols_linked_Tn'/> <br />
	Synonyms:zci-233::Tn10		Synonyms:zci-233::Tn10
			\|-
			\|
			[[:Category:Kohara_Phage:18B6\|18B6]]
			\|
			Kohara Phage
			\|
			[http://ecoli.aist-nara.ac.jp/GB6/kohara_info.jsp?fword=255 Genobase]
			\|
			PMID:3038334

	\|- class="tableEdit_footer"		\|- class="tableEdit_footer"

127.0.0.1: Fixing Gbrowse links (bug #119)

2011-08-17T19:56:46Z

Fixing Gbrowse links (bug #119)

← Older revision		Revision as of 19:56, 17 August 2011
Line 84:		Line 84:
	\|		\|
	*[http://biocyc.org/ECOLI/NEW-IMAGE?type=LOCUS-POSITION&chromosome=COLI-K12&object=EG11528 EcoCyc]		*[http://biocyc.org/ECOLI/NEW-IMAGE?type=LOCUS-POSITION&chromosome=COLI-K12&object=EG11528 EcoCyc]
	{{GBrowseLink\|~~ecoli~~\|NC_000913\|1347275\|1350063\|GBrowse(MG1655)}}		{{GBrowseLink\|MG1655\|NC_000913\|1347275\|1350063\|GBrowse(MG1655)}}

	\|		\|
	{{GBrowseFastaLink\|~~ecoli~~\|NC_000913\|1348275\|1349063\|FASTA Dump}}		{{GBrowseFastaLink\|MG1655\|NC_000913\|1348275\|1349063\|FASTA Dump}}
	*[http://biocyc.org/ECOLI/sequence?object=EG11528 EcoCyc Sequence Dump]		*[http://biocyc.org/ECOLI/sequence?object=EG11528 EcoCyc Sequence Dump]
	\|-		\|-
Line 118:		Line 118:

	\|		\|
	{{GBrowseLink\|BW2952\|~~012759~~\|1239124\|~~NC_1239912~~\|GBrowse (BW2952)}}		{{GBrowseLink\|BW2952\|NC_012759\|1239124\|1239912\|GBrowse (BW2952)}}
	\|		\|
	{{GBrowseFastaLink\|BW2952\|~~012759~~\|1239124\|~~NC_1239912~~\|FASTA Dump}}		{{GBrowseFastaLink\|BW2952\|NC_012759\|1239124\|1239912\|FASTA Dump}}
	\|-		\|-
	\|		\|
Line 134:		Line 134:

	\|		\|
	{{GBrowseLink\|~~ecoli_W3110~~\|AC_000091\|1350965\|1353753\|GBrowse(W3110)}}		{{GBrowseLink\|W3110\|AC_000091\|1350965\|1353753\|GBrowse(W3110)}}
	\|		\|
	{{GBrowseFastaLink\|~~ecoli_W3110~~\|AC_000091\|1351965\|1352753\|FASTA Dump}}		{{GBrowseFastaLink\|W3110\|AC_000091\|1351965\|1352753\|FASTA Dump}}
	\|-		\|-
	\|		\|
Line 150:		Line 150:

	\|		\|
	{{GBrowseLink\|~~ecoli_DH10B~~\|NC_010473\|1436095\|1440035\|GBrowse(DH10B)}}		{{GBrowseLink\|DH10B\|NC_010473\|1436095\|1440035\|GBrowse(DH10B)}}
	\|		\|
	{{GBrowseFastaLink\|~~ecoli_DH10B~~\|NC_010473\|1436095\|1440035\|FASTA Dump}}		{{GBrowseFastaLink\|DH10B\|NC_010473\|1436095\|1440035\|FASTA Dump}}

	\|- class="tableEdit_footer"		\|- class="tableEdit_footer"

127.0.0.1: Edited by wikibot

2011-06-27T16:58:20Z

Edited by wikibot

← Older revision		Revision as of 16:58, 27 June 2011
Line 129:		Line 129:
	W3110: 1352753..1351965<br /><gbrowseImage>		W3110: 1352753..1351965<br /><gbrowseImage>
	name=AC_000091:1351965..1352753		name=AC_000091:1351965..1352753
	source=~~MG1655_W3110~~		source=W3110
	preset=GeneLocation		preset=GeneLocation
	</gbrowseImage>		</gbrowseImage>