eptA:Gene Product(s) - Revision history

127.0.0.1: touch table

2015-02-17T21:12:51Z

touch table

← Older revision		Revision as of 21:12, 17 February 2015
Line 499:		Line 499:
	!align=left {{table heading style}} \|Mol. Wt		!align=left {{table heading style}} \|Mol. Wt
	\|\|		\|\|
	~~17 Da~~		62.803 kDa
	\|-		\|-
	!align=left {{table heading style}} \|pI		!align=left {{table heading style}} \|pI
	\|\|		\|\|
	6.1 (calculated)		6.8 (calculated)
	\|-		\|-
	!align=left {{table heading style}} \|Extinction coefficient		!align=left {{table heading style}} \|Extinction coefficient
	\|\|		\|\|
	0 (calc based on 0 Y, 0 W, and 0 C residues)		77,240 - 78,865 (calc based on 26 Y, 7 W, and 13 C residues)

	\|- class="tableEdit_footer"		\|- class="tableEdit_footer"

127.0.0.1: touch

2013-10-05T16:53:05Z

touch

← Older revision		Revision as of 16:53, 5 October 2013
Line 591:		Line 591:
	View models at:		View models at:
	* [http://www.proteinmodelportal.org/query/uniprot/P30845 Protein Model Portal]		* [http://www.proteinmodelportal.org/query/uniprot/P30845 Protein Model Portal]
	* [http://bioinf.cs.ucl.ac.uk/~~psipred~~/ PSI-PRED]		* [http://bioinf.cs.ucl.ac.uk/genome3d/read?uniprot_id=P30845 PSI-PRED (P30845)]
	* [http://spock.genes.nig.ac.jp/~genome/~~search~~.~~html~~ Genomes TO Protein] (GTOP)		* [http://spock.genes.nig.ac.jp/~genome/cgi-bin/gkeytext.pl.cgi?A&QUERY1=P30845 Genomes TO Protein (P30845)] (GTOP)

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127.0.0.1: touch

2013-10-05T16:17:13Z

touch

← Older revision		Revision as of 16:17, 5 October 2013
Line 499:		Line 499:
	!align=left {{table heading style}} \|Mol. Wt		!align=left {{table heading style}} \|Mol. Wt
	\|\|		\|\|
	~~62.803 kDa~~		17 Da
	\|-		\|-
	!align=left {{table heading style}} \|pI		!align=left {{table heading style}} \|pI
	\|\|		\|\|
	6.8 (calculated)		6.1 (calculated)
	\|-		\|-
	!align=left {{table heading style}} \|Extinction coefficient		!align=left {{table heading style}} \|Extinction coefficient
	\|\|		\|\|
	~~77,240 - 78,865~~ (calc based on 26 Y, 7 W, and 13 C residues)		0 (calc based on 0 Y, 0 W, and 0 C residues)

	\|- class="tableEdit_footer"		\|- class="tableEdit_footer"

127.0.0.1: touch

2013-05-27T08:09:45Z

touch

← Older revision		Revision as of 08:09, 27 May 2013
Line 75:		Line 75:
	*		*
	****************************************************************************************** -->{{Product_GO_help}}		****************************************************************************************** -->{{Product_GO_help}}
	{\| id="A46ab1da0f3cb2" class=" tableEdit GO_table_product dataTable"		{\| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" id="A46ab1da0f3cb2" class=" tableEdit GO_table_product dataTable"
	\|- {{table_heading_style}}		\|- {{table_heading_style}}
	!\|Qualifier!!GO ID!!GO term name!!Reference!!Evidence Code!!with/from!!Aspect!!Notes!!Status		!\|Qualifier!!GO ID!!GO term name!!Reference!!Evidence Code!!with/from!!Aspect!!Notes!!Status
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	*		*
	****************************************************************************************** -->{{Product_interactions_help}}		****************************************************************************************** -->{{Product_interactions_help}}
	{\| id="T46ab1da18bf39" class=" tableEdit Product_interactions_table dataTable"		{\| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" id="T46ab1da18bf39" class=" tableEdit Product_interactions_table dataTable"
	\|- {{table heading style}}		\|- {{table heading style}}
	!\|Partner Type!!Partner!!Notes!!References!!Evidence		!\|Partner Type!!Partner!!Notes!!References!!Evidence
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	*		*
	****************************************************************************************** -->{{Product_localization_help}}		****************************************************************************************** -->{{Product_localization_help}}
	{\| id="C46ab1da263e05" class=" tableEdit Product_localization_table"		{\| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" id="C46ab1da263e05" class=" tableEdit Product_localization_table"
	\|- {{table heading style}}		\|- {{table heading style}}
	!\|Compartment!!Description!!Evidence!!Reference/Source!!Notes		!\|Compartment!!Description!!Evidence!!Reference/Source!!Notes
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	*		*
	****************************************************************************************** -->{{Product_domains_motifs_help}}		****************************************************************************************** -->{{Product_domains_motifs_help}}
	{\| id="E46ab1da49669c" class=" tableEdit Product_motif_table dataTable"		{\| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" id="E46ab1da49669c" class=" tableEdit Product_motif_table dataTable"
	\|- {{table heading style}}		\|- {{table heading style}}
	!\|Type!!Residues!!Description!!Notes!!References		!\|Type!!Residues!!Description!!Notes!!References
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	*		*
	****************************************************************************************** -->{{Product_resources_help}}		****************************************************************************************** -->{{Product_resources_help}}
	{\| id="R46ab1da56fde2" class=" tableEdit Product_resource_table"		{\| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" id="R46ab1da56fde2" class=" tableEdit Product_resource_table"
	\|- {{table_heading_style}}		\|- {{table_heading_style}}
	!\|Resource type!!Source!!Notes/Reference		!\|Resource type!!Source!!Notes/Reference
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	*		*
	****************************************************************************************** -->{{Gene_accessions_help}}		****************************************************************************************** -->{{Gene_accessions_help}}
	{\| id="H46ab1da5d668e" class=" tableEdit Gene_accessions_table"		{\| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" id="H46ab1da5d668e" class=" tableEdit Gene_accessions_table"
	\|- {{table_heading_style}}		\|- {{table_heading_style}}
	!\|Database!!Accession!!Notes		!\|Database!!Accession!!Notes
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	\|-		\|-
	\|		\|
	~~[https://asap.ahabs.wisc.edu/asap/logon.php ASAP] (~~[[ASAP~~\|EcoliWiki Page~~]])		[[ASAP]]
	\|		\|
	~~[http://asap.ahabs.wisc.edu/asap/feature_info.php?LocationID=WIS&FeatureID=0013469&formSubmitReturn=1~~ ASAP:ABE-0013469]		ASAP:ABE-0013469
	\|		\|
	Escherichia coli str. K-12 substr. MG1655		''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655\|MG1655]]
	\|-		\|-
	\|		\|
Line 688:		Line 688:
	\|-		\|-
	\|		\|
	~~[http://ecocyc.org EcoCyc] (~~[[EcoCyc~~\|EcoliWiki Page~~]])		[[EcoCyc]]
	\|		\|
	~~[http~~:~~//biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=~~EG11613 ~~ECOCYC:EG11613]~~		EcoCyc:EG11613
	\|		\|
	Escherichia coli str. K-12 substr. MG1655		''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655\|MG1655]]
	\|-		\|-
	\|		\|
	~~[http://ecogene.org EcoGene] (~~[[EcoGene~~\|EcoliWiki Page~~]])		[[EcoGene]]
	\|		\|
	~~[http://ecogene.org/geneinfo.php?eg_id=EG11613~~ EcoGene:EG11613]		EcoGene:EG11613
	\|		\|
	Escherichia coli str. K-12 substr. MG1655		''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655\|MG1655]]
	\|-		\|-
	\|		\|
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	\|		\|
	Escherichia coli str. K-12 substr. MG1655		Escherichia coli str. K-12 substr. MG1655
			\|-
			\|
			[[RegulonDB]]
			\|
			RegulonDB:ECK120001561
			\|
			''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655\|MG1655]]
			\|-
			\|
			[[EchoBASE]]
			\|
			EchoBASE:EB1570
			\|
			''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655\|MG1655]]

	\|- class="tableEdit_footer"		\|- class="tableEdit_footer"
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	*		*
	****************************************************************************************** -->		****************************************************************************************** -->
	{\| id="B46ab1da98307a" class=" tableEdit Links_table"		{\| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" id="B46ab1da98307a" class=" tableEdit Links_table"
	\|- {{table_heading_style}}		\|- {{table_heading_style}}
	!\|Name!!URL!!Comments		!\|Name!!URL!!Comments

imported>Wikientrybot: Refreshing information from GenBank record NC_000913

2011-09-30T04:49:16Z

Refreshing information from GenBank record NC_000913

@@ Line 670: / Line 670: @@
+|
 [http://www.ncbi.nlm.nih.gov/protein/NP_418538.2 GeneID:948629]
+|
 Escherichia coli str. K-12 substr. MG1655

imported>Wikientrybot: Refreshing information from GenBank record NC_000913

2011-09-24T22:56:04Z

Refreshing information from GenBank record NC_000913

← Older revision		Revision as of 22:56, 24 September 2011
Line 44:		Line 44:
	!align=left {{table heading style}} \|Synonyms		!align=left {{table heading style}} \|Synonyms
	\|\|		\|\|
	predicted metal dependent hydrolase<ref name='LIB:Riley_2006'/>, B4114<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YjdB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, EptA prouct<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>		''predicted metal dependent hydrolase<ref name='LIB:Riley_2006'/>, B4114<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YjdB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, EptA prouct<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK4107, JW5730, pagB, pmrC, yjdB, b4114''
	\|-		\|-
	!align=left {{table heading style}} \|Product description		!align=left {{table heading style}} \|Product description
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	\|- {{table_heading_style}}		\|- {{table_heading_style}}
	!\|Database!!Accession!!Notes		!\|Database!!Accession!!Notes
			\|-
			\|
			[http://www.ncbi.nlm.nih.gov/protein NCBI (Protein)] ([[NCBI (Protein)\|EcoliWiki Page]])
			\|
			[http://www.ncbi.nlm.nih.gov/protein/90111688 GI:90111688]
			\|
			Escherichia coli str. K-12 substr. MG1655
			\|-
			\|
			[http://www.ncbi.nlm.nih.gov/protein NCBI (Protein)] ([[NCBI (Protein)\|EcoliWiki Page]])
			\|
			[http://www.ncbi.nlm.nih.gov/protein/NP_418538.2 GeneID:948629]
			\|
			Escherichia coli str. K-12 substr. MG1655

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imported>Wikientrybot: Bulk deleting accessions.

2011-09-21T19:59:44Z

Bulk deleting accessions.

@@ Line 658: / Line 658: @@
 |- {{table_heading_style}}
 !|Database!!Accession!!Notes
 |- class="tableEdit_footer"

127.0.0.1: /Volumes/r3/t3/ul/phpwikibots/trunk/touch_all_product_tables.php

2011-08-24T23:27:44Z

/Volumes/r3/t3/ul/phpwikibots/trunk/touch_all_product_tables.php

← Older revision		Revision as of 23:27, 24 August 2011
Line 438:		Line 438:
	{\| id="C46ab1da263e05" class=" tableEdit Product_localization_table"		{\| id="C46ab1da263e05" class=" tableEdit Product_localization_table"
	\|- {{table heading style}}		\|- {{table heading style}}
	!\|Compartment!!Description!!Evidence!!Source!!Notes		!\|Compartment!!Description!!Evidence!!Reference/Source!!Notes
	\|-		\|-
	\|		\|
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	!align=left {{table heading style}} \|Length		!align=left {{table heading style}} \|Length
	\|\|		\|\|
			557
	\|-		\|-
	!align=left {{table heading style}} \|Mol. Wt		!align=left {{table heading style}} \|Mol. Wt
	\|\|		\|\|
			62.803 kDa
	\|-		\|-
	!align=left {{table heading style}} \|pI		!align=left {{table heading style}} \|pI
	\|\|		\|\|
			6.8 (calculated)
	\|-		\|-
	!align=left {{table heading style}} \|Extinction coefficient		!align=left {{table heading style}} \|Extinction coefficient
	\|\|		\|\|
			77,240 - 78,865 (calc based on 26 Y, 7 W, and 13 C residues)

	\|- class="tableEdit_footer"		\|- class="tableEdit_footer"

127.0.0.1: Updating product models

2011-08-17T16:14:06Z

Updating product models

← Older revision		Revision as of 16:14, 17 August 2011
Line 590:		Line 590:
	\|\|		\|\|
	View models at:		View models at:
	* [http://~~dragon~~.~~bio~~.~~purdue.edu/ecolpredict2/localsearch/cgi-bin~~/~~search3.cgi?q=recA EcoliPredict]~~		* [http://www.proteinmodelportal.org/query/uniprot/P30845 Protein Model Portal]
	* [http://~~modbase.compbio.ucsf.edu/modbase-cgi/model_search.cgi?searchmode=default&displaymode=moddetail&searchproperties=ALL&searchvalue=recA&organism=562&organismtext= ModBase~~]
	* [http://bioinf.cs.ucl.ac.uk/psipred/ PSI-PRED]		* [http://bioinf.cs.ucl.ac.uk/psipred/ PSI-PRED]
	* [http://www.ebi.ac.uk/msd-srv/pqs/ Protein Quaternary Structure] (PQS)
	* [http://spock.genes.nig.ac.jp/~genome/search.html Genomes TO Protein] (GTOP)		* [http://spock.genes.nig.ac.jp/~genome/search.html Genomes TO Protein] (GTOP)

127.0.0.1: /Volumes/r3/t3/ul/phpwikibots/trunk/touch_all_tables.php

2011-08-15T22:10:50Z

/Volumes/r3/t3/ul/phpwikibots/trunk/touch_all_tables.php

← Older revision		Revision as of 22:10, 15 August 2011
Line 77:		Line 77:
	{\| id="A46ab1da0f3cb2" class=" tableEdit GO_table_product dataTable"		{\| id="A46ab1da0f3cb2" class=" tableEdit GO_table_product dataTable"
	\|- {{table_heading_style}}		\|- {{table_heading_style}}
	!\|Qualifier!!GO ID!!GO term name!!Reference~~(s)~~!!Evidence Code!!with/from!!Aspect!!Notes!!Status		!\|Qualifier!!GO ID!!GO term name!!Reference!!Evidence Code!!with/from!!Aspect!!Notes!!Status
	\|-		\|-
	\|		\|
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	****************************************************************************************** -->{{Product_physical_properties_help}}		****************************************************************************************** -->{{Product_physical_properties_help}}
	{\| id="H46ab1da41dc4e" class=" tableEdit Product_phys_prop_table"		{\| id="H46ab1da41dc4e" class=" tableEdit Product_phys_prop_table"

			\|-
			!align=left {{table heading style}} \|Name
			\|\|

	\|-		\|-
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	!align=left {{table heading style}} \|Length		!align=left {{table heading style}} \|Length
	\|\|		\|\|
	~~557~~
	\|-		\|-
	!align=left {{table heading style}} \|Mol. Wt		!align=left {{table heading style}} \|Mol. Wt
	\|\|		\|\|
	~~62.803 kDa~~
	\|-		\|-
	!align=left {{table heading style}} \|pI		!align=left {{table heading style}} \|pI
	\|\|		\|\|
	~~6.8 (calculated)~~
	\|-		\|-
	!align=left {{table heading style}} \|Extinction coefficient		!align=left {{table heading style}} \|Extinction coefficient
	\|\|		\|\|
	~~77,240 - 78,865 (calc based on 26 Y, 7 W, and 13 C residues)~~

	\|- class="tableEdit_footer"		\|- class="tableEdit_footer"