bamD:Evolution - Revision history

127.0.0.1: Adding evolution_families_table to Evolution pages.

2010-08-09T18:49:33Z

Adding evolution_families_table to Evolution pages.

← Older revision		Revision as of 18:49, 9 August 2010
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	<protect><!--Families_notes--></protect>		<protect><!--Families_notes--></protect>
			===Notes===

			==Families==
			{{BacktoTop}}
			<protect><!--box uid=bc145ea147f7e36caf09c1bfeed4ee9d.49171.H4c604dbd8fd09-->
			<!--
			******************************************************************************************
			*
			* PLEASE DON'T EDIT THIS TABLE DIRECTLY. Use the edit table link under the table.
			*
			****************************************************************************************** -->{{Evolution_families_table_help}}
			{\| id="H4c604dbd8fd09" class=" tableEdit Evolution_families_table"
			\|- {{table heading style}}
			!\|Database!!Accession!!Notes

			\|- class="tableEdit_footer"
			\|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=bc145ea147f7e36caf09c1bfeed4ee9d.49171.H4c604dbd8fd09&page=49171&pagename={{FULLPAGENAMEE}}&type=0&template=Evolution_families_table edit table]</span> \|\| \|\|
			\|}
			<!--box uid=bc145ea147f7e36caf09c1bfeed4ee9d.49171.H4c604dbd8fd09--></protect>
			<protect><!--Families_notes--></protect>

	===Notes===		===Notes===

127.0.0.1: /Volumes/r3/t3/ul/working/touchTables/touch_all_tables.php

2010-06-17T16:27:19Z

/Volumes/r3/t3/ul/working/touchTables/touch_all_tables.php

← Older revision		Revision as of 16:27, 17 June 2010
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	****************************************************************************************** -->{{Evolution_homologs_table_help}}		****************************************************************************************** -->{{Evolution_homologs_table_help}}
	{\| id="T46abe323929d3" class=" tableEdit Evolution_homologs_table"		{\| id="T46abe323929d3" class=" tableEdit Evolution_homologs_table"
	\|-		\|- {{table heading style}}
	!\|Organism!!Homologs (Statistics)!!Comments		!\|Organism!!Homologs (Statistics)!!Comments
	\|-		\|-
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	****************************************************************************************** -->		****************************************************************************************** -->
	{\| id="T46a8266542b4a" class=" tableEdit Links_table"		{\| id="T46a8266542b4a" class=" tableEdit Links_table"
	\|-		\|- {{table_heading_style}}
	!\|Name!!URL!!Comments		!\|Name!!URL!!Comments

127.0.0.1: Update TableEdit tables.

2010-01-09T00:11:41Z

Update TableEdit tables.

← Older revision		Revision as of 00:11, 9 January 2010
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	*		*
	****************************************************************************************** -->{{Evolution_homologs_table_help}}		****************************************************************************************** -->{{Evolution_homologs_table_help}}
	{\|~~class = 'sortable' border~~="2" ~~cellpadding~~="~~4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;~~"		{\| id="T46abe323929d3" class=" tableEdit Evolution_homologs_table"
	\|- ~~{{table heading style}}~~		\|-
	!\|Organism!!Homologs (Statistics)!!Comments		!\|Organism!!Homologs (Statistics)!!Comments
	\|-		\|-
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	From ECOO157CYC		From ECOO157CYC

	\|-class=~~'sortbottom'~~		\|- class="tableEdit_footer"
	\|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.49171.T46abe323929d3&page=49171&pagename={{FULLPAGENAMEE}}&type=&template=Evolution_homologs_table edit table] \|\| \|\|		\|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.49171.T46abe323929d3&page=49171&pagename={{FULLPAGENAMEE}}&type=&template=Evolution_homologs_table edit table]</span> \|\| \|\|
	\|}		\|}
	<!--box uid=421aa90e079fa326b6494f812ad13e79.49171.T46abe323929d3-->		<!--box uid=421aa90e079fa326b6494f812ad13e79.49171.T46abe323929d3-->
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	*		*
	****************************************************************************************** -->		****************************************************************************************** -->
	{\|~~class = 'sortable' border~~="2" ~~cellpadding~~="~~4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;~~"		{\| id="T46a8266542b4a" class=" tableEdit Links_table"
	\|- ~~{{table_heading_style}}~~		\|-
	!\|Name!!URL!!Comments		!\|Name!!URL!!Comments

	\|-class=~~'sortbottom'~~		\|- class="tableEdit_footer"
	\|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.49171.T46a8266542b4a&page=49171&pagename={{FULLPAGENAMEE}}&type=0&template=Links_table edit table] \|\| \|\|		\|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.49171.T46a8266542b4a&page=49171&pagename={{FULLPAGENAMEE}}&type=0&template=Links_table edit table]</span> \|\| \|\|
	\|}		\|}
	<!--box uid=421aa90e079fa326b6494f812ad13e79.49171.T46a8266542b4a-->		<!--box uid=421aa90e079fa326b6494f812ad13e79.49171.T46a8266542b4a-->

127.0.0.1: Fixing references section.

2009-06-26T18:09:03Z

Fixing references section.

← Older revision		Revision as of 18:09, 26 June 2009
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	==References==		==References==
	{{BacktoTop}}		{{BacktoTop}}
			{{RefHelp}}
	<references/>		<references />
	~~<noinclude~~>
	__NOTOC__		__NOTOC__
	~~</noinclude>~~
	===Categories===		===Categories===
	{{BacktoTop}}		{{BacktoTop}}

127.0.0.1: yfiO:Evolution moved to bamD:Evolution

2009-02-10T19:17:00Z

yfiO:Evolution moved to bamD:Evolution

← Older revision	Revision as of 19:17, 10 February 2009
(No difference)

127.0.0.1: BatchPageMover script.

2009-02-10T19:17:00Z

BatchPageMover script.

← Older revision		Revision as of 19:17, 10 February 2009
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	-->{{#css:Suppresslinks.css}}<css>{{:Suppresslinks.css}}</css>		-->{{#css:Suppresslinks.css}}<css>{{:Suppresslinks.css}}</css>
	<noinclude>{{TabsTop}}		<noinclude>{{TabsTop}}
	{{Tab\|Quickview\|~~yfiO~~}}{{Tab\|Gene\|~~yfiO~~}}{{Tab\|Gene Product(s)\|~~yfiO~~}}{{Tab\|Expression\|~~yfiO~~}}{{Tab On\|Evolution\|~~yfiO~~}}{{Tab\|On One Page\|~~yfiO~~}}{{TabsBottom}}		{{Tab\|Quickview\|bamD}}{{Tab\|Gene\|bamD}}{{Tab\|Gene Product(s)\|bamD}}{{Tab\|Expression\|bamD}}{{Tab On\|Evolution\|bamD}}{{Tab\|On One Page\|bamD}}{{TabsBottom}}
	{\|		{\|
	\|-		\|-

imported>Wikientrybot: Move help links into the tag inside templates.

2009-02-06T08:28:46Z

Move help links into the <above> tag inside templates.

← Older revision	Revision as of 08:28, 6 February 2009
(No difference)

imported>Wikientrybot: Move help links into the tag inside templates.

2009-01-21T21:54:24Z

Move help links into the <above> tag inside templates.

← Older revision		Revision as of 21:54, 21 January 2009
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	<!--		<!--
	******************************************************************************************		******************************************************************************************
	*		*
	* PLEASE DON'T EDIT THIS TABLE DIRECTLY. Use the edit table link under the table.		* PLEASE DON'T EDIT THIS TABLE DIRECTLY. Use the edit table link under the table.
	*		*
	****************************************************************************************** -->		****************************************************************************************** -->{{Evolution_homologs_table_help}}
	{\|class = 'sortable' ~~{{Prettytable}} id~~=~~'211414'~~		{\|class = 'sortable' border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"
	\|- {{table heading style}}		\|- {{table heading style}}
	!Organism!!Homologs (Statistics)!!Comments		!\|Organism!!Homologs (Statistics)!!Comments
	\|-		\|-
	\|		\|
	''Xenopus tropicalis''		''Xenopus tropicalis''
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	\|		\|
	From Inparanoid:20070104		From Inparanoid:20070104
	\|-		\|-
	\|		\|
	''Shigella flexneri''		''Shigella flexneri''
Line 46:		Line 46:
	\|		\|
	From SHIGELLACYC		From SHIGELLACYC
	\|-		\|-
	\|		\|
	''E. coli'' O157		''E. coli'' O157
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	\|		\|
	From ECOO157CYC		From ECOO157CYC

	\|-class='sortbottom'		\|-class='sortbottom'
	\|[{{SERVER}}{{SCRIPTPATH}}~~/index.php~~?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.49171.T46abe323929d3&page=49171&pagename={{FULLPAGENAMEE}} edit table] \|\| \|\|		\|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.49171.T46abe323929d3&page=49171&pagename={{FULLPAGENAMEE}}&type=&template=Evolution_homologs_table edit table] \|\| \|\|
	\|}		\|}
	<!--box uid=421aa90e079fa326b6494f812ad13e79.49171.T46abe323929d3-->		<!--box uid=421aa90e079fa326b6494f812ad13e79.49171.T46abe323929d3-->
	~~{{Evolution_homologs_table_help}}~~

	~~===Do-It-Yourself Web Tools===~~
	*[http://130.14.29.110/BLAST/ BLAST]
	*[http://130.14.29.110/BLAST/Blast.cgi?CMD=Web&LAYOUT=TwoWindows&AUTO_FORMAT=Semiauto&ALIGNMENTS=250&ALIGNMENT_VIEW=Pairwise&CLIENT=web&COMPOSITION_BASED_STATISTICS=on&DATABASE=nr&CDD_SEARCH=on&DESCRIPTIONS=500&ENTREZ_QUERY=%28none%29&EXPECT=10&FORMAT_OBJECT=Alignment&FORMAT_TYPE=HTML&I_THRESH=0.005&MATRIX_NAME=BLOSUM62&NCBI_GI=on&PAGE=Proteins&PROGRAM=blastp&RUN_PSIBLAST=on&SERVICE=plain&SET_DEFAULTS.x=36&SET_DEFAULTS.y=5&SHOW_OVERVIEW=on&END_OF_HTTPGET=Yes&SHOW_LINKOUT=yes&GET_SEQUENCE=yes&SEARCH_NAME=psi_bp/ CDD]
	*[http://inparanoid.sbc.su.se/cgi-bin/gene_search.cgi?id=NP_417086&idtype=all&all_or_selection=all&specieslist=1&scorelimit=0.05&.submit=Submit&.cgifields=specieslist&.cgifields=idtype&.cgifields=all_or_selection InParanoid]
	*[http://www.sanger.ac.uk/PostGenomics/S_pombe/YOGY/ YOGY]

	~~<protect><!--Homology_notes--></protect>~~
	~~===Notes===~~


	~~==Families==~~
	~~{{BacktoTop}}~~
	~~<!--box uid=421aa90e079fa326b6494f812ad13e79.49171.T46abe323929d3-->~~
	~~<!--~~
	~~******************************************************************************************~~
	*
	~~* PLEASE DON'T EDIT THIS TABLE DIRECTLY. Use the edit table link under the table. ~~
	*
	****************************************************************************************** -->
	~~{\|class = 'sortable' {{Prettytable}} id='211414'~~
	~~\|- {{table heading style}}~~
	~~!Organism!!Homologs (Statistics)!!Comments~~
	\|-
	\|
	~~''Xenopus tropicalis''~~
	\|
	* ENSXETP00000023513 (score: 1.000; bootstrap: 100%)
	\|
	~~From Inparanoid:20070104~~
	\|-
	\|
	~~''Shigella flexneri''~~
	\|
	~~S2828~~
	\|
	~~From SHIGELLACYC~~
	\|-
	\|
	~~''E. coli'' O157~~
	\|
	~~Z3889~~
	\|
	~~From ECOO157CYC~~
	~~\|-class='sortbottom'~~
	~~\|[{{SERVER}}{{SCRIPTPATH}}/index.php?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.49171.T46abe323929d3&page=49171&pagename={{FULLPAGENAMEE}} edit table] \|\| \|\|~~
	\|}
	~~<!--box uid=421aa90e079fa326b6494f812ad13e79.49171.T46abe323929d3-->~~
	~~{{Evolution_families_table_help}}~~
	<protect><!--Families_notes--></protect>		<protect><!--Families_notes--></protect>
	===Notes===		===Notes===
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	<!--		<!--
	******************************************************************************************		******************************************************************************************
	*		*
	* PLEASE DON'T EDIT THIS TABLE DIRECTLY. Use the edit table link under the table.		* PLEASE DON'T EDIT THIS TABLE DIRECTLY. Use the edit table link under the table.
	*		*
	****************************************************************************************** -->		****************************************************************************************** -->
	{\|class = 'sortable' ~~{{Prettytable}} id~~=~~'113137'~~		{\|class = 'sortable' border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"
	\|- {{table_heading_style}}		\|- {{table_heading_style}}
	!Name!!URL!!Comments		!\|Name!!URL!!Comments

	\|-class='sortbottom'		\|-class='sortbottom'
	\|[{{SERVER}}{{SCRIPTPATH}}~~/index.php~~?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.49171.T46a8266542b4a&page=49171&pagename={{FULLPAGENAMEE}} edit table] \|\| \|\|		\|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.49171.T46a8266542b4a&page=49171&pagename={{FULLPAGENAMEE}}&type=0&template=Links_table edit table] \|\| \|\|
	\|}		\|}
	<!--box uid=421aa90e079fa326b6494f812ad13e79.49171.T46a8266542b4a-->		<!--box uid=421aa90e079fa326b6494f812ad13e79.49171.T46a8266542b4a-->
	~~{{Links_help}}~~

	==References==		==References==
	{{BacktoTop}}		{{BacktoTop}}
	~~{{RefHelp}}~~
	<references/>		<references/>
	<noinclude>		<noinclude>

127.0.0.1: Edited by wikibot

2008-04-30T10:28:17Z

Edited by wikibot

← Older revision		Revision as of 10:28, 30 April 2008
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	From ECOO157CYC		From ECOO157CYC
	\|-class='sortbottom'		\|-class='sortbottom'
	\|[{{SERVER}}~~/colipedia~~/index.php?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.49171.T46abe323929d3&page=49171&pagename={{FULLPAGENAMEE}} edit table] \|\| \|\|		\|[{{SERVER}}{{SCRIPTPATH}}/index.php?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.49171.T46abe323929d3&page=49171&pagename={{FULLPAGENAMEE}} edit table] \|\| \|\|
	\|}		\|}
	<!--box uid=421aa90e079fa326b6494f812ad13e79.49171.T46abe323929d3-->		<!--box uid=421aa90e079fa326b6494f812ad13e79.49171.T46abe323929d3-->
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	From ECOO157CYC		From ECOO157CYC
	\|-class='sortbottom'		\|-class='sortbottom'
	\|[{{SERVER}}~~/colipedia~~/index.php?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.49171.T46abe323929d3&page=49171&pagename={{FULLPAGENAMEE}} edit table] \|\| \|\|		\|[{{SERVER}}{{SCRIPTPATH}}/index.php?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.49171.T46abe323929d3&page=49171&pagename={{FULLPAGENAMEE}} edit table] \|\| \|\|
	\|}		\|}
	<!--box uid=421aa90e079fa326b6494f812ad13e79.49171.T46abe323929d3-->		<!--box uid=421aa90e079fa326b6494f812ad13e79.49171.T46abe323929d3-->
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	!Name!!URL!!Comments		!Name!!URL!!Comments
	\|-class='sortbottom'		\|-class='sortbottom'
	\|[{{SERVER}}~~/colipedia~~/index.php?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.49171.T46a8266542b4a&page=49171&pagename={{FULLPAGENAMEE}} edit table] \|\| \|\|		\|[{{SERVER}}{{SCRIPTPATH}}/index.php?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.49171.T46a8266542b4a&page=49171&pagename={{FULLPAGENAMEE}} edit table] \|\| \|\|
	\|}		\|}
	<!--box uid=421aa90e079fa326b6494f812ad13e79.49171.T46a8266542b4a-->		<!--box uid=421aa90e079fa326b6494f812ad13e79.49171.T46a8266542b4a-->

127.0.0.1: Edited by wikibot

2007-11-14T07:01:52Z

Edited by wikibot

← Older revision		Revision as of 07:01, 14 November 2007
Line 62:		Line 62:
	*[http://130.14.29.110/BLAST/ BLAST]		*[http://130.14.29.110/BLAST/ BLAST]
	*[http://130.14.29.110/BLAST/Blast.cgi?CMD=Web&LAYOUT=TwoWindows&AUTO_FORMAT=Semiauto&ALIGNMENTS=250&ALIGNMENT_VIEW=Pairwise&CLIENT=web&COMPOSITION_BASED_STATISTICS=on&DATABASE=nr&CDD_SEARCH=on&DESCRIPTIONS=500&ENTREZ_QUERY=%28none%29&EXPECT=10&FORMAT_OBJECT=Alignment&FORMAT_TYPE=HTML&I_THRESH=0.005&MATRIX_NAME=BLOSUM62&NCBI_GI=on&PAGE=Proteins&PROGRAM=blastp&RUN_PSIBLAST=on&SERVICE=plain&SET_DEFAULTS.x=36&SET_DEFAULTS.y=5&SHOW_OVERVIEW=on&END_OF_HTTPGET=Yes&SHOW_LINKOUT=yes&GET_SEQUENCE=yes&SEARCH_NAME=psi_bp/ CDD]		*[http://130.14.29.110/BLAST/Blast.cgi?CMD=Web&LAYOUT=TwoWindows&AUTO_FORMAT=Semiauto&ALIGNMENTS=250&ALIGNMENT_VIEW=Pairwise&CLIENT=web&COMPOSITION_BASED_STATISTICS=on&DATABASE=nr&CDD_SEARCH=on&DESCRIPTIONS=500&ENTREZ_QUERY=%28none%29&EXPECT=10&FORMAT_OBJECT=Alignment&FORMAT_TYPE=HTML&I_THRESH=0.005&MATRIX_NAME=BLOSUM62&NCBI_GI=on&PAGE=Proteins&PROGRAM=blastp&RUN_PSIBLAST=on&SERVICE=plain&SET_DEFAULTS.x=36&SET_DEFAULTS.y=5&SHOW_OVERVIEW=on&END_OF_HTTPGET=Yes&SHOW_LINKOUT=yes&GET_SEQUENCE=yes&SEARCH_NAME=psi_bp/ CDD]
	*[http://inparanoid.sbc.su.se/cgi-bin/~~eid_search~~.pl?id=NP_417086&idtype=all&~~start~~=on&~~species~~=~~All~~&~~conf~~=0.05 InParanoid]		*[http://inparanoid.sbc.su.se/cgi-bin/gene_search.cgi?id=NP_417086&idtype=all&all_or_selection=all&specieslist=1&scorelimit=0.05&.submit=Submit&.cgifields=specieslist&.cgifields=idtype&.cgifields=all_or_selection InParanoid]
	*[http://www.sanger.ac.uk/PostGenomics/S_pombe/YOGY/ YOGY]		*[http://www.sanger.ac.uk/PostGenomics/S_pombe/YOGY/ YOGY]