amiD:Gene Product(s) - Revision history

127.0.0.1: touch table

2015-02-17T20:31:11Z

touch table

← Older revision		Revision as of 20:31, 17 February 2015
Line 368:		Line 368:
	!align=left {{table heading style}} \|Mol. Wt		!align=left {{table heading style}} \|Mol. Wt
	\|\|		\|\|
	~~17 Da~~		31.072 kDa
	\|-		\|-
	!align=left {{table heading style}} \|pI		!align=left {{table heading style}} \|pI
	\|\|		\|\|
	6.1 (calculated)		7.8 (calculated)
	\|-		\|-
	!align=left {{table heading style}} \|Extinction coefficient		!align=left {{table heading style}} \|Extinction coefficient
	\|\|		\|\|
	0 (calc based on 0 Y, 0 W, and 0 C residues)		56,380 - 56,505 (calc based on 12 Y, 7 W, and 1 C residues)

	\|- class="tableEdit_footer"		\|- class="tableEdit_footer"

127.0.0.1: touch

2013-10-05T16:28:22Z

touch

← Older revision		Revision as of 16:28, 5 October 2013
Line 444:		Line 444:
	View models at:		View models at:
	* [http://www.proteinmodelportal.org/query/uniprot/P75820 Protein Model Portal]		* [http://www.proteinmodelportal.org/query/uniprot/P75820 Protein Model Portal]
	* [http://bioinf.cs.ucl.ac.uk/~~psipred~~/ PSI-PRED]		* [http://bioinf.cs.ucl.ac.uk/genome3d/read?uniprot_id=P75820 PSI-PRED (P75820)]
	* [http://spock.genes.nig.ac.jp/~genome/~~search~~.~~html~~ Genomes TO Protein] (GTOP)		* [http://spock.genes.nig.ac.jp/~genome/cgi-bin/gkeytext.pl.cgi?A&QUERY1=P75820 Genomes TO Protein (P75820)] (GTOP)

	\|- class="tableEdit_footer"		\|- class="tableEdit_footer"

127.0.0.1: touch

2013-10-05T15:54:08Z

touch

← Older revision		Revision as of 15:54, 5 October 2013
Line 368:		Line 368:
	!align=left {{table heading style}} \|Mol. Wt		!align=left {{table heading style}} \|Mol. Wt
	\|\|		\|\|
	~~31.072 kDa~~		17 Da
	\|-		\|-
	!align=left {{table heading style}} \|pI		!align=left {{table heading style}} \|pI
	\|\|		\|\|
	7.8 (calculated)		6.1 (calculated)
	\|-		\|-
	!align=left {{table heading style}} \|Extinction coefficient		!align=left {{table heading style}} \|Extinction coefficient
	\|\|		\|\|
	~~56,380 - 56,505~~ (calc based on 12 Y, 7 W, and 1 C residues)		0 (calc based on 0 Y, 0 W, and 0 C residues)

	\|- class="tableEdit_footer"		\|- class="tableEdit_footer"

127.0.0.1: touch

2013-05-27T07:43:27Z

touch

← Older revision		Revision as of 07:43, 27 May 2013
Line 74:		Line 74:
	*		*
	****************************************************************************************** -->{{Product_GO_help}}		****************************************************************************************** -->{{Product_GO_help}}
	{\| id="H46aa480a80641" class=" tableEdit GO_table_product dataTable"		{\| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" id="H46aa480a80641" class=" tableEdit GO_table_product dataTable"
	\|- {{table_heading_style}}		\|- {{table_heading_style}}
	!\|Qualifier!!GO ID!!GO term name!!Reference!!Evidence Code!!with/from!!Aspect!!Notes!!Status		!\|Qualifier!!GO ID!!GO term name!!Reference!!Evidence Code!!with/from!!Aspect!!Notes!!Status
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	*		*
	****************************************************************************************** -->{{Product_interactions_help}}		****************************************************************************************** -->{{Product_interactions_help}}
	{\| id="Y46aa480af2b9f" class=" tableEdit Product_interactions_table dataTable"		{\| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" id="Y46aa480af2b9f" class=" tableEdit Product_interactions_table dataTable"
	\|- {{table heading style}}		\|- {{table heading style}}
	!\|Partner Type!!Partner!!Notes!!References!!Evidence		!\|Partner Type!!Partner!!Notes!!References!!Evidence
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	*		*
	****************************************************************************************** -->{{Product_localization_help}}		****************************************************************************************** -->{{Product_localization_help}}
	{\| id="A46a7d9c8bfa82" class=" tableEdit Product_localization_table"		{\| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" id="A46a7d9c8bfa82" class=" tableEdit Product_localization_table"
	\|- {{table heading style}}		\|- {{table heading style}}
	!\|Compartment!!Description!!Evidence!!Reference/Source!!Notes		!\|Compartment!!Description!!Evidence!!Reference/Source!!Notes
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	*		*
	****************************************************************************************** -->{{Product_domains_motifs_help}}		****************************************************************************************** -->{{Product_domains_motifs_help}}
	{\| id="E46aa480d1e0c5" class=" tableEdit Product_motif_table dataTable"		{\| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" id="E46aa480d1e0c5" class=" tableEdit Product_motif_table dataTable"
	\|- {{table heading style}}		\|- {{table heading style}}
	!\|Type!!Residues!!Description!!Notes!!References		!\|Type!!Residues!!Description!!Notes!!References
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	*		*
	****************************************************************************************** -->{{Product_resources_help}}		****************************************************************************************** -->{{Product_resources_help}}
	{\| id="G46aa480db748b" class=" tableEdit Product_resource_table"		{\| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" id="G46aa480db748b" class=" tableEdit Product_resource_table"
	\|- {{table_heading_style}}		\|- {{table_heading_style}}
	!\|Resource type!!Source!!Notes/Reference		!\|Resource type!!Source!!Notes/Reference
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	*		*
	****************************************************************************************** -->{{Gene_accessions_help}}		****************************************************************************************** -->{{Gene_accessions_help}}
	{\| id="T46aa480e0f293" class=" tableEdit Gene_accessions_table"		{\| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" id="T46aa480e0f293" class=" tableEdit Gene_accessions_table"
	\|- {{table_heading_style}}		\|- {{table_heading_style}}
	!\|Database!!Accession!!Notes		!\|Database!!Accession!!Notes
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	\|-		\|-
	\|		\|
	~~[https://asap.ahabs.wisc.edu/asap/logon.php ASAP] (~~[[ASAP~~\|EcoliWiki Page~~]])		[[ASAP]]
	\|		\|
	~~[http://asap.ahabs.wisc.edu/asap/feature_info.php?LocationID=WIS&FeatureID=0002947&formSubmitReturn=1~~ ASAP:ABE-0002947]		ASAP:ABE-0002947
	\|		\|
	Escherichia coli str. K-12 substr. MG1655		''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655\|MG1655]]
	\|-		\|-
	\|		\|
Line 541:		Line 541:
	\|-		\|-
	\|		\|
	~~[http://ecocyc.org EcoCyc] (~~[[EcoCyc~~\|EcoliWiki Page~~]])		[[EcoCyc]]
	\|		\|
	~~[http~~:~~//biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=~~G6452 ~~ECOCYC:G6452]~~		EcoCyc:G6452
	\|		\|
	Escherichia coli str. K-12 substr. MG1655		''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655\|MG1655]]
	\|-		\|-
	\|		\|
	~~[http://ecogene.org EcoGene] (~~[[EcoGene~~\|EcoliWiki Page~~]])		[[EcoGene]]
	\|		\|
	~~[http://ecogene.org/geneinfo.php?eg_id=EG13687~~ EcoGene:EG13687]		EcoGene:EG13687
	\|		\|
	Escherichia coli str. K-12 substr. MG1655		''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655\|MG1655]]
	\|-		\|-
	\|		\|
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	\|		\|
	Escherichia coli str. K-12 substr. MG1655		Escherichia coli str. K-12 substr. MG1655
			\|-
			\|
			[[RegulonDB]]
			\|
			RegulonDB:ECK120003052
			\|
			''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655\|MG1655]]
			\|-
			\|
			[[EchoBASE]]
			\|
			EchoBASE:EB3451
			\|
			''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655\|MG1655]]

	\|- class="tableEdit_footer"		\|- class="tableEdit_footer"
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	*		*
	****************************************************************************************** -->		****************************************************************************************** -->
	{\| id="O46a7d9cecb334" class=" tableEdit Links_table"		{\| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" id="O46a7d9cecb334" class=" tableEdit Links_table"
	\|- {{table_heading_style}}		\|- {{table_heading_style}}
	!\|Name!!URL!!Comments		!\|Name!!URL!!Comments

imported>Wikientrybot: Refreshing information from GenBank record NC_000913

2011-09-28T23:00:50Z

Refreshing information from GenBank record NC_000913

@@ Line 523: / Line 523: @@
+|
 [http://www.ncbi.nlm.nih.gov/protein/NP_415388.1 GeneID:945494]
+|
 Escherichia coli str. K-12 substr. MG1655

imported>Wikientrybot: Refreshing information from GenBank record NC_000913

2011-09-23T00:19:18Z

Refreshing information from GenBank record NC_000913

← Older revision		Revision as of 00:19, 23 September 2011
Line 44:		Line 44:
	!align=left {{table heading style}} \|Synonyms		!align=left {{table heading style}} \|Synonyms
	\|\|		\|\|
	predicted amidase and lipoprotein<ref name='LIB:Riley_2006'/>, YbjR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, B0867<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>		''predicted amidase and lipoprotein<ref name='LIB:Riley_2006'/>, YbjR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, B0867<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK0858, JW0851, ybjR, b0867''
	\|-		\|-
	!align=left {{table heading style}} \|Product description		!align=left {{table heading style}} \|Product description
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	\|- {{table_heading_style}}		\|- {{table_heading_style}}
	!\|Database!!Accession!!Notes		!\|Database!!Accession!!Notes
			\|-
			\|
			[http://www.ncbi.nlm.nih.gov/protein NCBI (Protein)] ([[NCBI (Protein)\|EcoliWiki Page]])
			\|
			[http://www.ncbi.nlm.nih.gov/protein/16128835 GI:16128835]
			\|
			Escherichia coli str. K-12 substr. MG1655
			\|-
			\|
			[http://www.ncbi.nlm.nih.gov/protein NCBI (Protein)] ([[NCBI (Protein)\|EcoliWiki Page]])
			\|
			[http://www.ncbi.nlm.nih.gov/protein/NP_415388.1 GeneID:945494]
			\|
			Escherichia coli str. K-12 substr. MG1655

	\|- class="tableEdit_footer"		\|- class="tableEdit_footer"

imported>Wikientrybot: Bulk deleting accessions.

2011-09-21T19:28:55Z

Bulk deleting accessions.

@@ Line 511: / Line 511: @@
 |- {{table_heading_style}}
 !|Database!!Accession!!Notes
 |- class="tableEdit_footer"

127.0.0.1: /Volumes/r3/t3/ul/phpwikibots/trunk/touch_all_product_tables.php

2011-08-24T23:09:28Z

/Volumes/r3/t3/ul/phpwikibots/trunk/touch_all_product_tables.php

← Older revision		Revision as of 23:09, 24 August 2011
Line 323:		Line 323:
	{\| id="A46a7d9c8bfa82" class=" tableEdit Product_localization_table"		{\| id="A46a7d9c8bfa82" class=" tableEdit Product_localization_table"
	\|- {{table heading style}}		\|- {{table heading style}}
	!\|Compartment!!Description!!Evidence!!Source!!Notes		!\|Compartment!!Description!!Evidence!!Reference/Source!!Notes

	\|- class="tableEdit_footer"		\|- class="tableEdit_footer"
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	!align=left {{table heading style}} \|Length		!align=left {{table heading style}} \|Length
	\|\|		\|\|
			276
	\|-		\|-
	!align=left {{table heading style}} \|Mol. Wt		!align=left {{table heading style}} \|Mol. Wt
	\|\|		\|\|
			31.072 kDa
	\|-		\|-
	!align=left {{table heading style}} \|pI		!align=left {{table heading style}} \|pI
	\|\|		\|\|
			7.8 (calculated)
	\|-		\|-
	!align=left {{table heading style}} \|Extinction coefficient		!align=left {{table heading style}} \|Extinction coefficient
	\|\|		\|\|
			56,380 - 56,505 (calc based on 12 Y, 7 W, and 1 C residues)

	\|- class="tableEdit_footer"		\|- class="tableEdit_footer"

127.0.0.1: Updating product models

2011-08-17T16:01:23Z

Updating product models

← Older revision		Revision as of 16:01, 17 August 2011
Line 443:		Line 443:
	\|\|		\|\|
	View models at:		View models at:
	* [http://~~dragon~~.~~bio~~.~~purdue.edu/ecolpredict2/localsearch/cgi-bin~~/~~search3.cgi?q=recA EcoliPredict]~~		* [http://www.proteinmodelportal.org/query/uniprot/P75820 Protein Model Portal]
	* [http://~~modbase.compbio.ucsf.edu/modbase-cgi/model_search.cgi?searchmode=default&displaymode=moddetail&searchproperties=ALL&searchvalue=recA&organism=562&organismtext= ModBase~~]
	* [http://bioinf.cs.ucl.ac.uk/psipred/ PSI-PRED]		* [http://bioinf.cs.ucl.ac.uk/psipred/ PSI-PRED]
	* [http://www.ebi.ac.uk/msd-srv/pqs/ Protein Quaternary Structure] (PQS)
	* [http://spock.genes.nig.ac.jp/~genome/search.html Genomes TO Protein] (GTOP)		* [http://spock.genes.nig.ac.jp/~genome/search.html Genomes TO Protein] (GTOP)

127.0.0.1: /Volumes/r3/t3/ul/phpwikibots/trunk/touch_all_tables.php

2011-08-15T21:18:01Z

/Volumes/r3/t3/ul/phpwikibots/trunk/touch_all_tables.php

← Older revision		Revision as of 21:18, 15 August 2011
Line 76:		Line 76:
	{\| id="H46aa480a80641" class=" tableEdit GO_table_product dataTable"		{\| id="H46aa480a80641" class=" tableEdit GO_table_product dataTable"
	\|- {{table_heading_style}}		\|- {{table_heading_style}}
	!\|Qualifier!!GO ID!!GO term name!!Reference~~(s)~~!!Evidence Code!!with/from!!Aspect!!Notes!!Status		!\|Qualifier!!GO ID!!GO term name!!Reference!!Evidence Code!!with/from!!Aspect!!Notes!!Status
	\|-		\|-
	\|		\|
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	****************************************************************************************** -->{{Product_physical_properties_help}}		****************************************************************************************** -->{{Product_physical_properties_help}}
	{\| id="M46aa480cb6622" class=" tableEdit Product_phys_prop_table"		{\| id="M46aa480cb6622" class=" tableEdit Product_phys_prop_table"

			\|-
			!align=left {{table heading style}} \|Name
			\|\|

	\|-		\|-
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	!align=left {{table heading style}} \|Length		!align=left {{table heading style}} \|Length
	\|\|		\|\|
	~~276~~
	\|-		\|-
	!align=left {{table heading style}} \|Mol. Wt		!align=left {{table heading style}} \|Mol. Wt
	\|\|		\|\|
	~~31.072 kDa~~
	\|-		\|-
	!align=left {{table heading style}} \|pI		!align=left {{table heading style}} \|pI
	\|\|		\|\|
	~~7.8 (calculated)~~
	\|-		\|-
	!align=left {{table heading style}} \|Extinction coefficient		!align=left {{table heading style}} \|Extinction coefficient
	\|\|		\|\|
	~~56,380 - 56,505 (calc based on 12 Y, 7 W, and 1 C residues)~~

	\|- class="tableEdit_footer"		\|- class="tableEdit_footer"