allB:Gene - Revision history

127.0.0.1: touch

2013-09-19T20:32:34Z

touch

← Older revision		Revision as of 20:32, 19 September 2013
Line 128:		Line 128:
	\|		\|
	W3110: 538371..539732<br /><gbrowseImage>		W3110: 538371..539732<br /><gbrowseImage>
	name=~~AC_000091~~:538371..539732		name=NC_007779:538371..539732
	source=W3110		source=W3110
	preset=GeneLocation		preset=GeneLocation
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	\|		\|
	{{GBrowseLink\|W3110\|~~AC_000091~~\|537371\|540732\|GBrowse(W3110)}}		{{GBrowseLink\|W3110\|NC_007779\|537371\|540732\|GBrowse(W3110)}}
	\|		\|
	{{GBrowseFastaLink\|W3110\|~~AC_000091~~\|538371\|539732\|FASTA Dump}}		{{GBrowseFastaLink\|W3110\|NC_007779\|538371\|539732\|FASTA Dump}}
	\|-		\|-
	\|		\|
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	\|-		\|-
	\|		\|
	~~[http://www.ncbi.nlm.nih.gov/gene NCBI] (~~[[~~NCBI\|EcoliWiki Page~~]])		[[RegulonDB]]
	\|		\|
	~~[http~~:~~//www.ncbi.nlm.nih.gov/gene?term=945134 GeneID:945134]~~		RegulonDB:ECK120002889
	\|		\|
	Escherichia coli str. K-12 substr. MG1655		''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655\|MG1655]]
	\|-		\|-
	\|		\|
	[[~~RegulonDB~~]]		[http://www.ncbi.nlm.nih.gov/gene NCBI] ([[NCBI\|EcoliWiki Page]])
	\|		\|
	~~RegulonDB~~:~~ECK120002889~~		[http://www.ncbi.nlm.nih.gov/gene?term=945134 GeneID:945134]
	\|		\|
	''Escherichia coli'' str. K-12 substr. ~~[[:Category:Strain:~~MG1655~~\|MG1655]]~~		Escherichia coli str. K-12 substr. MG1655
	\|-		\|-
	\|		\|

127.0.0.1: touch

2013-05-27T07:15:29Z

touch

← Older revision		Revision as of 07:15, 27 May 2013
Line 67:		Line 67:
	*		*
	****************************************************************************************** -->{{Gene_location_help}}		****************************************************************************************** -->{{Gene_location_help}}
	{\| id="O46a9b264a9fd1" class=" tableEdit Gene_location_table"		{\| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" id="O46a9b264a9fd1" class=" tableEdit Gene_location_table"
	\|- {{table_heading_style}}		\|- {{table_heading_style}}
	!\|Strain!!Map location!!Genome coordinates!!Genome browsers!!Sequence links		!\|Strain!!Map location!!Genome coordinates!!Genome browsers!!Sequence links
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	*		*
	****************************************************************************************** -->{{Gene_sequence_features_help}}		****************************************************************************************** -->{{Gene_sequence_features_help}}
	{\| id="F46a9b26590baf" class=" tableEdit Gene_sequence_features_table"		{\| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" id="F46a9b26590baf" class=" tableEdit Gene_sequence_features_table"
	\|- {{table_heading_style}}		\|- {{table_heading_style}}
	!\|Feature Type!!Strain!!Genomic Location!!Evidence!!Reference!!Notes		!\|Feature Type!!Strain!!Genomic Location!!Evidence!!Reference!!Notes
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	*		*
	****************************************************************************************** -->{{Gene_alleles_help}}		****************************************************************************************** -->{{Gene_alleles_help}}
	{\| ~~{{Prettytable}}~~ id="P46a9b2660a2d5" class=" tableEdit Gene_allele_table dataTable"		{\| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" id="P46a9b2660a2d5" class=" tableEdit Gene_allele_table dataTable"
	\|- {{table_heading_style}}		\|- {{table_heading_style}}
	!\|Allele!!Nt change(s)!!AA change(s)!!Phenotype: Type!!Phenotype: Description!!Reference!!Availability!!Comments		!\|Allele!!Nt change(s)!!AA change(s)!!Phenotype: Type!!Phenotype: Description!!Reference!!Availability!!Comments
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	*		*
	****************************************************************************************** -->{{Genetic_interaction_help}}		****************************************************************************************** -->{{Genetic_interaction_help}}
	{\| id="Z4e04b732c1cc9" class=" tableEdit Genetic_interaction_table dataTable"		{\| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" id="Z4e04b732c1cc9" class=" tableEdit Genetic_interaction_table dataTable"
	\|- {{table_heading_style}}		\|- {{table_heading_style}}
	!\|Interactor!!Interaction!!Allele!!Score(s)!!Reference(s)!!Accessions!!Notes		!\|Interactor!!Interaction!!Allele!!Score(s)!!Reference(s)!!Accessions!!Notes
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	*		*
	****************************************************************************************** -->{{Gene_resources_help}}		****************************************************************************************** -->{{Gene_resources_help}}
	{\| id="E46a9b266e53ad" class=" tableEdit Gene_resource_table"		{\| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" id="E46a9b266e53ad" class=" tableEdit Gene_resource_table"
	\|- {{table_heading_style}}		\|- {{table_heading_style}}
	!\|Resource!!Resource Type!!Source!!Notes/Reference		!\|Resource!!Resource Type!!Source!!Notes/Reference
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	*		*
	****************************************************************************************** -->{{Gene_accessions_help}}		****************************************************************************************** -->{{Gene_accessions_help}}
	{\| id="Z46a9b267cc295" class=" tableEdit Gene_accessions_table"		{\| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" id="Z46a9b267cc295" class=" tableEdit Gene_accessions_table"
	\|- {{table_heading_style}}		\|- {{table_heading_style}}
	!\|Database!!Accession!!Notes		!\|Database!!Accession!!Notes
	\|-		\|-
	\|		\|
	~~[http://ecocyc.org EcoCyc] (~~[[EcoCyc~~\|EcoliWiki Page~~]])		[[EcoCyc]]
	\|		\|
	~~[http~~:~~//biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=~~G6281 ~~ECOCYC:G6281]~~		EcoCyc:G6281
	\|		\|
	Escherichia coli str. K-12 substr. MG1655		''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655\|MG1655]]
	\|-		\|-
	\|		\|
	~~[http://ecogene.org EcoGene] (~~[[EcoGene~~\|EcoliWiki Page~~]])		[[EcoGene]]
	\|		\|
	~~[http://ecogene.org/geneinfo.php?eg_id=EG13619~~ EcoGene:EG13619]		EcoGene:EG13619
	\|		\|
	Escherichia coli str. K-12 substr. MG1655		''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655\|MG1655]]
	\|-		\|-
	\|		\|
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	\|		\|
	Escherichia coli str. K-12 substr. MG1655		Escherichia coli str. K-12 substr. MG1655
			\|-
			\|
			[[RegulonDB]]
			\|
			RegulonDB:ECK120002889
			\|
			''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655\|MG1655]]
			\|-
			\|
			[[EchoBASE]]
			\|
			EchoBASE:EB3384
			\|
			''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655\|MG1655]]
			\|-
			\|
			[[ASAP]]
			\|
			ASAP:ABE-0001768
			\|
			''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655\|MG1655]]

	\|- class="tableEdit_footer"		\|- class="tableEdit_footer"
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	*		*
	****************************************************************************************** -->		****************************************************************************************** -->
	{\| id="H46a6cfeee7757" class=" tableEdit Links_table"		{\| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" id="H46a6cfeee7757" class=" tableEdit Links_table"
	\|- {{table_heading_style}}		\|- {{table_heading_style}}
	!\|Name!!URL!!Comments		!\|Name!!URL!!Comments

Joncrz: Table edited by Joncrz via TableEdit

2012-01-27T04:06:20Z

Table edited by Joncrz via TableEdit

← Older revision		Revision as of 04:06, 27 January 2012
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	\|-		\|-
	\|		\|
	~~Δ~~allB (Keio:JW0500)		''allB(del)'' (Keio:JW0500)
	\|		\|
	deletion		deletion
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	PMID:16738554		PMID:16738554
	\|		\|
	[http://www.shigen.nig.ac.jp/ecoli/strain/keioCollectionQueryAction.do Shigen]~~<br>~~[http://cgsc2.biology.yale.edu/Strain.php?ID=106926 CGSC8645]<ref name='LIB:cgsc'/>		[http://www.shigen.nig.ac.jp/ecoli/strain/keioCollectionQueryAction.do Shigen]

			[http://cgsc2.biology.yale.edu/Strain.php?ID=106926 CGSC8645]<ref name='LIB:cgsc'/>
	\|		\|

	\|-		\|-
	\|		\|
	''~~Δ~~allB724::kan''		''allB724(del)::kan''
	\|		\|

imported>Wikientrybot: Refreshing information from GenBank record NC_000913

2011-09-22T23:08:55Z

Refreshing information from GenBank record NC_000913

@@ Line 46: / Line 46: @@
 !align=left {{table_heading_style}} |Synonyms
 ||
-''ECK0505, b0512, JW0500, glxB3, ybbX''<ref name='LIB:Riley_2006'/>
+''ECK0505, b0512, JW0500, glxB3, ybbX''<ref name='LIB:Riley_2006'/>, ybbX''
 |- class="tableEdit_footer"
@@ Line 350: / Line 350: @@
 |- {{table_heading_style}}
 !|Database!!Accession!!Notes
 |- class="tableEdit_footer"

imported>Wikientrybot: Bulk deleting accessions.

2011-09-21T19:28:00Z

Bulk deleting accessions.

@@ Line 297: / Line 297: @@
+|
 [http://ecoli.aist-nara.ac.jp/GB6/kohara_info.jsp?fword=156 Genobase]
+|
 PMID:3038334
@@ Line 319: / Line 328: @@
 est. P1 cotransduction: 62% <ref name='LIB:Nichols_linked_Tn'/> <br />
 Synonyms:purE79::Tn10
 |- class="tableEdit_footer"
@@ Line 350: / Line 350: @@
 |- {{table_heading_style}}
 !|Database!!Accession!!Notes
 |- class="tableEdit_footer"

127.0.0.1: Data loaded by TableEdit_Loader.

2011-09-02T20:16:57Z

Data loaded by TableEdit_Loader.

← Older revision		Revision as of 20:16, 2 September 2011
Line 290:		Line 290:

	Primer 2:CCCTGCTGATGTTTAAGGATAAA		Primer 2:CCCTGCTGATGTTTAAGGATAAA
			\|-
			\|
			[[:Category:Kohara_Phage:9E5\|9E5]]
			\|
			Kohara Phage
			\|
			[http://ecoli.aist-nara.ac.jp/GB6/kohara_info.jsp?fword=156 Genobase]
			\|
			PMID:3038334
	\|-		\|-
	\|		\|
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	\|-		\|-
	\|		\|
	[[:Category:Kohara_Phage:~~9E5~~\|~~9E5~~]]		[[:Category:Kohara_Phage:6E7\|6E7]]
	\|		\|
	Kohara Phage		Kohara Phage
	\|		\|
	[http://ecoli.aist-nara.ac.jp/GB6/kohara_info.jsp?fword=~~156~~ Genobase]		[http://ecoli.aist-nara.ac.jp/GB6/kohara_info.jsp?fword=157 Genobase]
	\|		\|
	PMID:3038334		PMID:3038334

127.0.0.1: Data loaded by TableEdit_Loader.

2011-09-02T20:16:52Z

Data loaded by TableEdit_Loader.

← Older revision		Revision as of 20:16, 2 September 2011
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	est. P1 cotransduction: 62% <ref name='LIB:Nichols_linked_Tn'/> <br />		est. P1 cotransduction: 62% <ref name='LIB:Nichols_linked_Tn'/> <br />
	Synonyms:purE79::Tn10		Synonyms:purE79::Tn10
			\|-
			\|
			[[:Category:Kohara_Phage:9E5\|9E5]]
			\|
			Kohara Phage
			\|
			[http://ecoli.aist-nara.ac.jp/GB6/kohara_info.jsp?fword=156 Genobase]
			\|
			PMID:3038334

	\|- class="tableEdit_footer"		\|- class="tableEdit_footer"

127.0.0.1: Fixing Gbrowse links (bug #119)

2011-08-17T19:40:07Z

Fixing Gbrowse links (bug #119)

← Older revision		Revision as of 19:40, 17 August 2011
Line 84:		Line 84:
	\|		\|
	*[http://biocyc.org/ECOLI/NEW-IMAGE?type=LOCUS-POSITION&chromosome=COLI-K12&object=G6281 EcoCyc]		*[http://biocyc.org/ECOLI/NEW-IMAGE?type=LOCUS-POSITION&chromosome=COLI-K12&object=G6281 EcoCyc]
	{{GBrowseLink\|~~ecoli~~\|NC_000913\|537371\|540732\|GBrowse(MG1655)}}		{{GBrowseLink\|MG1655\|NC_000913\|537371\|540732\|GBrowse(MG1655)}}

	\|		\|
	{{GBrowseFastaLink\|~~ecoli~~\|NC_000913\|538371\|539732\|FASTA Dump}}		{{GBrowseFastaLink\|MG1655\|NC_000913\|538371\|539732\|FASTA Dump}}
	*[http://biocyc.org/ECOLI/sequence?object=G6281 EcoCyc Sequence Dump]		*[http://biocyc.org/ECOLI/sequence?object=G6281 EcoCyc Sequence Dump]
	\|-		\|-
Line 118:		Line 118:

	\|		\|
	{{GBrowseLink\|BW2952\|~~012759~~\|441130\|~~NC_442491~~\|GBrowse (BW2952)}}		{{GBrowseLink\|BW2952\|NC_012759\|441130\|442491\|GBrowse (BW2952)}}
	\|		\|
	{{GBrowseFastaLink\|BW2952\|~~012759~~\|441130\|~~NC_442491~~\|FASTA Dump}}		{{GBrowseFastaLink\|BW2952\|NC_012759\|441130\|442491\|FASTA Dump}}
	\|-		\|-
	\|		\|
Line 134:		Line 134:

	\|		\|
	{{GBrowseLink\|~~ecoli_W3110~~\|AC_000091\|537371\|540732\|GBrowse(W3110)}}		{{GBrowseLink\|W3110\|AC_000091\|537371\|540732\|GBrowse(W3110)}}
	\|		\|
	{{GBrowseFastaLink\|~~ecoli_W3110~~\|AC_000091\|538371\|539732\|FASTA Dump}}		{{GBrowseFastaLink\|W3110\|AC_000091\|538371\|539732\|FASTA Dump}}
	\|-		\|-
	\|		\|
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	\|		\|
	{{GBrowseLink\|~~ecoli_DH10B~~\|NC_010473\|474980\|481785\|GBrowse(DH10B)}}		{{GBrowseLink\|DH10B\|NC_010473\|474980\|481785\|GBrowse(DH10B)}}
	\|		\|
	{{GBrowseFastaLink\|~~ecoli_DH10B~~\|NC_010473\|474980\|481785\|FASTA Dump}}		{{GBrowseFastaLink\|DH10B\|NC_010473\|474980\|481785\|FASTA Dump}}

	\|- class="tableEdit_footer"		\|- class="tableEdit_footer"

127.0.0.1: Edited by wikibot

2011-06-27T16:44:49Z

Edited by wikibot

← Older revision		Revision as of 16:44, 27 June 2011
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	W3110: 538371..539732<br /><gbrowseImage>		W3110: 538371..539732<br /><gbrowseImage>
	name=AC_000091:538371..539732		name=AC_000091:538371..539732
	source=~~MG1655_W3110~~		source=W3110
	preset=GeneLocation		preset=GeneLocation
	</gbrowseImage>		</gbrowseImage>

127.0.0.1: Edited by wikibot

2011-06-26T05:06:55Z

Edited by wikibot

← Older revision		Revision as of 05:06, 26 June 2011
Line 145:		Line 145:
	DH10B: 477702..479063<br /><gbrowseImage>		DH10B: 477702..479063<br /><gbrowseImage>
	name=NC_010473:477702..479063		name=NC_010473:477702..479063
	source=~~MG1655_DH10B~~		source=DH10B
	preset=GeneLocation		preset=GeneLocation
	</gbrowseImage>		</gbrowseImage>