Phage Mu U:Gene - Revision history

127.0.0.1: touch

2013-09-19T20:56:30Z

touch

← Older revision		Revision as of 20:56, 19 September 2013
Line 67:		Line 67:
	*		*
	****************************************************************************************** -->{{Gene_location_help}}		****************************************************************************************** -->{{Gene_location_help}}
	{\| id="V49edfda5b8b6e" class=" tableEdit Gene_location_table"		{\| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" id="V49edfda5b8b6e" class=" tableEdit Gene_location_table"
	\|- {{table_heading_style}}		\|- {{table_heading_style}}
	!\|Strain!!Map location!!Genome coordinates!!Genome browsers!!Sequence links		!\|Strain!!Map location!!Genome coordinates!!Genome browsers!!Sequence links
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	*		*
	****************************************************************************************** -->{{Genetic_interaction_help}}		****************************************************************************************** -->{{Genetic_interaction_help}}
	{\| id="W4e04b2de9d8f0" class=" tableEdit Genetic_interaction_table dataTable"		{\| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" id="W4e04b2de9d8f0" class=" tableEdit Genetic_interaction_table dataTable"
	\|- {{table_heading_style}}		\|- {{table_heading_style}}
	!\|Interactor!!Interaction!!Allele!!Score(s)!!Reference(s)!!Accessions!!Notes		!\|Interactor!!Interaction!!Allele!!Score(s)!!Reference(s)!!Accessions!!Notes

127.0.0.1: Edited by wikibot

2011-06-26T06:55:27Z

Edited by wikibot

← Older revision		Revision as of 06:55, 26 June 2011
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	NC_000929: 31921..34556<br /><gbrowseImage>		NC_000929: 31921..34556<br /><gbrowseImage>
	name=NC_000929:31921..34556		name=NC_000929:31921..34556
	source=~~bacteriophage_mu~~		source=bacteriophage_Mu
	preset=GeneLocation		preset=GeneLocation
	</gbrowseImage>		</gbrowseImage>

127.0.0.1: Adding section & Genetic interactions table to Gene pages.

2011-06-24T15:53:03Z

Adding section & Genetic interactions table to Gene pages.

@@ Line 17: / Line 17: @@
 |{{Sub}}[[#Sequence Features|Sequence Features]]
 |{{Sub}}[[#Alleles and Phenotypes |Alleles and Phenotypes]]
 |{{Sub}}[[#Genetic Resources  |Genetic Resources]]
 |{{Sub}}[[#Accessions in Other Databases |Accessions]]
@@ Line 135: / Line 136: @@
 ===Notes===
 ==Genetic Resources==

127.0.0.1: Convert to gbrowse_img.php extension.

2010-07-26T19:43:14Z

Convert to gbrowse_img.php extension.

← Older revision		Revision as of 19:43, 26 July 2010
Line 75:		Line 75:

	\|		\|
	NC_000929: 31921..34556<br />~~{{GBrowseFigureByCoord\|~~31921\|34556\|bacteriophage_mu~~\|NC_000929}}~~		NC_000929: 31921..34556<br /><gbrowseImage>
			name=NC_000929:31921..34556
			source=bacteriophage_mu
			preset=GeneLocation
			</gbrowseImage>

	\|		\|
	{{GBrowseLink\|bacteriophage_mu\|NC_000929\|32975\|33502\|GBrowse (Phage_Mu)}}		{{GBrowseLink\|bacteriophage_mu\|NC_000929\|32975\|33502\|GBrowse (Phage_Mu)}}

127.0.0.1: moved Phage Mu 50:Gene to Phage Mu U:Gene

2010-07-15T20:37:28Z

moved Phage Mu 50:Gene to Phage Mu U:Gene

← Older revision	Revision as of 20:37, 15 July 2010
(No difference)

127.0.0.1: BatchPageMover script.

2010-07-15T20:37:28Z

BatchPageMover script.

← Older revision		Revision as of 20:37, 15 July 2010
Line 10:		Line 10:
	-->{{#css:Suppresslinks.css}}<css>{{:Suppresslinks.css}}</css>		-->{{#css:Suppresslinks.css}}<css>{{:Suppresslinks.css}}</css>
	{{TabsTop}}		{{TabsTop}}
	{{Tab\|Quickview\|~~Phage_Mu_50~~}}{{Tab On\|Gene\|~~Phage_Mu_50~~}}{{Tab\|Gene Product(s)\|~~Phage_Mu_50~~}}{{Tab\|Expression\|~~Phage_Mu_50~~}}{{Tab\|Evolution\|~~Phage_Mu_50~~}}{{Tab\|On One Page\|~~Phage_Mu_50~~}}{{TabsBottom}}		{{Tab\|Quickview\|Phage_Mu_U}}{{Tab On\|Gene\|Phage_Mu_U}}{{Tab\|Gene Product(s)\|Phage_Mu_U}}{{Tab\|Expression\|Phage_Mu_U}}{{Tab\|Evolution\|Phage_Mu_U}}{{Tab\|On One Page\|Phage_Mu_U}}{{TabsBottom}}
	{\|		{\|
	\|- style="background-color:white; border:solid 2px #CCFFFF; text-align:center; white-space: nowrap;"		\|- style="background-color:white; border:solid 2px #CCFFFF; text-align:center; white-space: nowrap;"
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	!align=left {{table_heading_style}} \|Standard name		!align=left {{table_heading_style}} \|Standard name
	\|\|		\|\|
	50		U
	\|-		\|-
	!align=left {{table_heading_style}} \|Mnemonic		!align=left {{table_heading_style}} \|Mnemonic
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	!align=left {{table_heading_style}} \|Synonyms		!align=left {{table_heading_style}} \|Synonyms
	\|\|		\|\|
			Phage_Mu_U, Phage_Mu_50

	\|- class="tableEdit_footer"		\|- class="tableEdit_footer"

127.0.0.1: /Volumes/r3/t3/ul/working/touchTables/touch_all_tables.php

2010-06-17T18:49:48Z

/Volumes/r3/t3/ul/working/touchTables/touch_all_tables.php

← Older revision		Revision as of 18:49, 17 June 2010
Line 33:		Line 33:
	*		*
	****************************************************************************************** -->{{Gene_nomenclature_help}}		****************************************************************************************** -->{{Gene_nomenclature_help}}
	{\| id="L49edfda5ac156" class=" tableEdit Gene_nomenclature_table"		{\| id="L49edfda5ac156" class=" tableEdit Gene_nomenclature_table"

	\|-		\|-

127.0.0.1: Insert SeqFeature_Table link.

2010-05-10T23:23:24Z

Insert SeqFeature_Table link.

← Older revision		Revision as of 23:23, 10 May 2010
Line 15:		Line 15:
	\|{{Sub}}[[#Nomenclature \|Nomenclature]]		\|{{Sub}}[[#Nomenclature \|Nomenclature]]
	\|{{Sub}}[[#Location(s) and DNA Sequence\|Location(s) and DNA Sequence]]		\|{{Sub}}[[#Location(s) and DNA Sequence\|Location(s) and DNA Sequence]]
			\|{{Sub}}[[#Sequence Features\|Sequence Features]]
	\|{{Sub}}[[#Alleles and Phenotypes \|Alleles and Phenotypes]]		\|{{Sub}}[[#Alleles and Phenotypes \|Alleles and Phenotypes]]
	\|{{Sub}}[[#Genetic Resources \|Genetic Resources]]		\|{{Sub}}[[#Genetic Resources \|Genetic Resources]]

127.0.0.1: /Volumes/r3/t3/ul/working/touchTables/touch_all_tables.php

2010-05-10T23:02:33Z

/Volumes/r3/t3/ul/working/touchTables/touch_all_tables.php

← Older revision		Revision as of 23:02, 10 May 2010
Line 35:		Line 35:

	\|-		\|-
	!align=left \|Standard name		!align=left {{table_heading_style}} \|Standard name
	\|\|		\|\|
	50		50
	\|-		\|-
	!align=left \|Mnemonic		!align=left {{table_heading_style}} \|Mnemonic
	\|\|		\|\|

	\|-		\|-
	!align=left \|Synonyms		!align=left {{table_heading_style}} \|Synonyms
	\|\|		\|\|

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	****************************************************************************************** -->{{Gene_location_help}}		****************************************************************************************** -->{{Gene_location_help}}
	{\| id="V49edfda5b8b6e" class=" tableEdit Gene_location_table"		{\| id="V49edfda5b8b6e" class=" tableEdit Gene_location_table"
	\|-		\|- {{table_heading_style}}
	!\|Strain!!Map location!!Genome coordinates!!Genome browsers!!Sequence links		!\|Strain!!Map location!!Genome coordinates!!Genome browsers!!Sequence links
	\|-		\|-
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	****************************************************************************************** -->{{Gene_sequence_features_help}}		****************************************************************************************** -->{{Gene_sequence_features_help}}
	{\| id="X49edfda5bedff" class=" tableEdit Gene_sequence_features_table"		{\| id="X49edfda5bedff" class=" tableEdit Gene_sequence_features_table"
	\|-		\|- {{table_heading_style}}
	!\|Feature ~~type~~!!Location!!~~Description~~		!\|Feature Type!!Strain!!Genomic Location!!Evidence!!Reference!!Notes

	\|- class="tableEdit_footer"		\|- class="tableEdit_footer"
	\|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.162986.X49edfda5bedff&page=162986&pagename={{FULLPAGENAMEE}}&type=0&template=Gene_sequence_features_table edit table]</span> \|\| \|\|		\|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.162986.X49edfda5bedff&page=162986&pagename={{FULLPAGENAMEE}}&type=0&template=Gene_sequence_features_table edit table]</span> \|\| \|\| \|\| \|\| \|\|
	\|}		\|}
	<!--box uid=421aa90e079fa326b6494f812ad13e79.162986.X49edfda5bedff--></protect>		<!--box uid=421aa90e079fa326b6494f812ad13e79.162986.X49edfda5bedff--></protect>
Line 118:		Line 118:
	*		*
	****************************************************************************************** -->{{Gene_alleles_help}}		****************************************************************************************** -->{{Gene_alleles_help}}
	{\| id="P49edfda5c4c5c" class=" tableEdit Gene_allele_table"		{\| id="P49edfda5c4c5c" class=" tableEdit Gene_allele_table dataTable"
	\|-		\|- {{table_heading_style}}
	!\|Allele!!Nt change(s)!!AA change(s)!!Phenotype: Type!!Phenotype: Description!!Reference!!Availability!!Comments		!\|Allele!!Nt change(s)!!AA change(s)!!Phenotype: Type!!Phenotype: Description!!Reference!!Availability!!Comments

Line 140:		Line 140:
	****************************************************************************************** -->{{Gene_resources_help}}		****************************************************************************************** -->{{Gene_resources_help}}
	{\| id="D49edfda5caccb" class=" tableEdit Gene_resource_table"		{\| id="D49edfda5caccb" class=" tableEdit Gene_resource_table"
	\|-		\|- {{table_heading_style}}
	!\|Resource!!Resource Type!!Source!!Notes/Reference		!\|Resource!!Resource Type!!Source!!Notes/Reference

Line 161:		Line 161:
	****************************************************************************************** -->{{Gene_accessions_help}}		****************************************************************************************** -->{{Gene_accessions_help}}
	{\| id="L49edfda5d2f35" class=" tableEdit Gene_accessions_table"		{\| id="L49edfda5d2f35" class=" tableEdit Gene_accessions_table"
	\|-		\|- {{table_heading_style}}
	!\|Database!!Accession!!Notes		!\|Database!!Accession!!Notes
	\|-		\|-
Line 189:		Line 189:
	****************************************************************************************** -->		****************************************************************************************** -->
	{\| id="J49edfda5d6e0b" class=" tableEdit Links_table"		{\| id="J49edfda5d6e0b" class=" tableEdit Links_table"
	\|-		\|- {{table_heading_style}}
	!\|Name!!URL!!Comments		!\|Name!!URL!!Comments

127.0.0.1: Update TableEdit tables.

2010-01-09T02:51:40Z

Update TableEdit tables.

← Older revision		Revision as of 02:51, 9 January 2010
Line 32:		Line 32:
	*		*
	****************************************************************************************** -->{{Gene_nomenclature_help}}		****************************************************************************************** -->{{Gene_nomenclature_help}}
	{\|~~border~~="2" ~~cellpadding~~="~~4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;~~"		{\| id="L49edfda5ac156" class=" tableEdit Gene_nomenclature_table"

	\|-		\|-
	!align=left ~~{{table_heading_style}}~~ \|Standard name		!align=left \|Standard name
	\|\|		\|\|
	50		50
	\|-		\|-
	!align=left ~~{{table_heading_style}}~~ \|Mnemonic		!align=left \|Mnemonic
	\|\|		\|\|

	\|-		\|-
	!align=left ~~{{table_heading_style}}~~ \|Synonyms		!align=left \|Synonyms
	\|\|		\|\|


	\|-class=~~'sortbottom'~~		\|- class="tableEdit_footer"
	\|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.162986.L49edfda5ac156&page=162986&pagename={{FULLPAGENAMEE}}&type=1&template=Gene_nomenclature_table edit table] \|\|		\|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.162986.L49edfda5ac156&page=162986&pagename={{FULLPAGENAMEE}}&type=1&template=Gene_nomenclature_table edit table]</span> \|\|
	\|}		\|}
	<!--box uid=421aa90e079fa326b6494f812ad13e79.162986.L49edfda5ac156--></protect>		<!--box uid=421aa90e079fa326b6494f812ad13e79.162986.L49edfda5ac156--></protect>
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	*		*
	****************************************************************************************** -->{{Gene_location_help}}		****************************************************************************************** -->{{Gene_location_help}}
	{\|~~class = 'sortable' border~~="2" ~~cellpadding~~="~~4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;~~"		{\| id="V49edfda5b8b6e" class=" tableEdit Gene_location_table"
	\|- ~~{{table_heading_style}}~~		\|-
	!\|Strain!!Map location!!Genome coordinates!!Genome browsers!!Sequence links		!\|Strain!!Map location!!Genome coordinates!!Genome browsers!!Sequence links
	\|-		\|-
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	{{GBrowseFastaLink\|bacteriophage_mu\|NC_000929\|32975\|33502\|FASTA Dump}}		{{GBrowseFastaLink\|bacteriophage_mu\|NC_000929\|32975\|33502\|FASTA Dump}}

	\|-class=~~'sortbottom'~~		\|- class="tableEdit_footer"
	\|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.162986.V49edfda5b8b6e&page=162986&pagename={{FULLPAGENAMEE}}&type=0&template=Gene_location_table edit table] \|\| \|\| \|\| \|\|		\|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.162986.V49edfda5b8b6e&page=162986&pagename={{FULLPAGENAMEE}}&type=0&template=Gene_location_table edit table]</span> \|\| \|\| \|\| \|\|
	\|}		\|}
	<!--box uid=421aa90e079fa326b6494f812ad13e79.162986.V49edfda5b8b6e--></protect>		<!--box uid=421aa90e079fa326b6494f812ad13e79.162986.V49edfda5b8b6e--></protect>
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	*		*
	****************************************************************************************** -->{{Gene_sequence_features_help}}		****************************************************************************************** -->{{Gene_sequence_features_help}}
	{\|~~class = 'sortable' border~~="2" ~~cellpadding~~="~~4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;~~"		{\| id="X49edfda5bedff" class=" tableEdit Gene_sequence_features_table"
	\|- ~~{{table_heading_style}}~~		\|-
	!\|Feature type!!Location!!Description		!\|Feature type!!Location!!Description

	\|-class=~~'sortbottom'~~		\|- class="tableEdit_footer"
	\|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.162986.X49edfda5bedff&page=162986&pagename={{FULLPAGENAMEE}}&type=0&template=Gene_sequence_features_table edit table] \|\| \|\|		\|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.162986.X49edfda5bedff&page=162986&pagename={{FULLPAGENAMEE}}&type=0&template=Gene_sequence_features_table edit table]</span> \|\| \|\|
	\|}		\|}
	<!--box uid=421aa90e079fa326b6494f812ad13e79.162986.X49edfda5bedff--></protect>		<!--box uid=421aa90e079fa326b6494f812ad13e79.162986.X49edfda5bedff--></protect>
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	*		*
	****************************************************************************************** -->{{Gene_alleles_help}}		****************************************************************************************** -->{{Gene_alleles_help}}
	{\|~~class = 'sortable' border~~="2" ~~cellpadding~~="~~4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;~~"		{\| id="P49edfda5c4c5c" class=" tableEdit Gene_allele_table"
	\|- ~~{{table_heading_style}}~~		\|-
	!\|Allele!!Nt change(s)!!AA change(s)!!Phenotype: Type!!Phenotype: Description!!Reference!!Availability!!Comments		!\|Allele!!Nt change(s)!!AA change(s)!!Phenotype: Type!!Phenotype: Description!!Reference!!Availability!!Comments

	\|-class=~~'sortbottom'~~		\|- class="tableEdit_footer"
	\|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.162986.P49edfda5c4c5c&page=162986&pagename={{FULLPAGENAMEE}}&type=0&template=Gene_allele_table edit table] \|\| \|\| \|\| \|\| \|\| \|\| \|\|		\|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.162986.P49edfda5c4c5c&page=162986&pagename={{FULLPAGENAMEE}}&type=0&template=Gene_allele_table edit table]</span> \|\| \|\| \|\| \|\| \|\| \|\| \|\|
	\|}		\|}
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	*		*
	****************************************************************************************** -->{{Gene_resources_help}}		****************************************************************************************** -->{{Gene_resources_help}}
	{\|~~class = 'sortable' border~~="2" ~~cellpadding~~="~~4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;~~"		{\| id="D49edfda5caccb" class=" tableEdit Gene_resource_table"
	\|- ~~{{table_heading_style}}~~		\|-
	!\|Resource!!Resource Type!!Source!!Notes/Reference		!\|Resource!!Resource Type!!Source!!Notes/Reference

	\|-class=~~'sortbottom'~~		\|- class="tableEdit_footer"
	\|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.162986.D49edfda5caccb&page=162986&pagename={{FULLPAGENAMEE}}&type=0&template=Gene_resource_table edit table] \|\| \|\| \|\|		\|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.162986.D49edfda5caccb&page=162986&pagename={{FULLPAGENAMEE}}&type=0&template=Gene_resource_table edit table]</span> \|\| \|\| \|\|
	\|}		\|}
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	*		*
	****************************************************************************************** -->{{Gene_accessions_help}}		****************************************************************************************** -->{{Gene_accessions_help}}
	{\|~~class = 'sortable' border~~="2" ~~cellpadding~~="~~4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;~~"		{\| id="L49edfda5d2f35" class=" tableEdit Gene_accessions_table"
	\|- ~~{{table_heading_style}}~~		\|-
	!\|Database!!Accession!!Notes		!\|Database!!Accession!!Notes
	\|-		\|-
Line 171:		Line 171:


	\|-class=~~'sortbottom'~~		\|- class="tableEdit_footer"
	\|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.162986.L49edfda5d2f35&page=162986&pagename={{FULLPAGENAMEE}}&type=0&template=Gene_accessions_table edit table] \|\| \|\|		\|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.162986.L49edfda5d2f35&page=162986&pagename={{FULLPAGENAMEE}}&type=0&template=Gene_accessions_table edit table]</span> \|\| \|\|
	\|}		\|}
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	*		*
	****************************************************************************************** -->		****************************************************************************************** -->
	{\|~~class = 'sortable' border~~="2" ~~cellpadding~~="~~4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;~~"		{\| id="J49edfda5d6e0b" class=" tableEdit Links_table"
	\|- ~~{{table_heading_style}}~~		\|-
	!\|Name!!URL!!Comments		!\|Name!!URL!!Comments

	\|-class=~~'sortbottom'~~		\|- class="tableEdit_footer"
	\|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.162986.J49edfda5d6e0b&page=162986&pagename={{FULLPAGENAMEE}}&type=0&template=Links_table edit table] \|\| \|\|		\|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.162986.J49edfda5d6e0b&page=162986&pagename={{FULLPAGENAMEE}}&type=0&template=Links_table edit table]</span> \|\| \|\|
	\|}		\|}
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