PMID:2678006 - Revision history

imported>Wikientrybot: change PMID template to TableEdit version

2013-09-15T04:44:55Z

change PMID template to TableEdit version

← Older revision		Revision as of 04:44, 15 September 2013
Line 12:		Line 12:
	!align=left \|Citation		!align=left \|Citation
	\|\|		\|\|
	'''~~No author listed~~''' (1989) Role of the extra G-C pair at the end of the acceptor stem of tRNA(His) in aminoacylation. ''Nucleic Acids Res.'' '''17''':7855-63		'''Himeno, H, Hasegawa, T, Ueda, T, Watanabe, K, Miura, K and Shimizu, M''' (1989) Role of the extra G-C pair at the end of the acceptor stem of tRNA(His) in aminoacylation. ''Nucleic Acids Res.'' '''17''':7855-63
	\|-		\|-
	!align=left \|Abstract		!align=left \|Abstract

imported>Wikientrybot: replace GO_table_reference with annotationlinks

2013-09-01T19:19:44Z

replace GO_table_reference with annotationlinks

@@ Line 38: / Line 38: @@
 ==Annotations {{HelpIcon|Help:Literature}}==
-<!--box uid=63ce1649aab8b3180235b0af7618f667.0.G47ab2e211f5c0-->
+<annotationlinks/>
 ==EcoliWiki Links {{HelpIcon|Help:Literature}} ==

imported>Wikientrybot: change PMID template to TableEdit version

2013-09-01T19:19:44Z

change PMID template to TableEdit version

← Older revision		Revision as of 19:19, 1 September 2013
Line 1:		Line 1:
	{{RightTOC}}		{{RightTOC}}
			<!--box uid=d41d8cd98f00b204e9800998ecf8427e.129347.M5223935013995-->
			<!--
			******************************************************************************************
			*
			* PLEASE DON'T EDIT THIS TABLE DIRECTLY. Use the edit table link under the table.
			*
			****************************************************************************************** -->
			{\| id="M5223935013995" class=" tableEdit PMID_info_table"

	~~<span style~~ = ~~'font-size: large'>~~ '''~~Himeno, H, Hasegawa, T, Ueda, T, Watanabe, K, Miura, K and Shimizu, M~~''' (1989) Role of the extra G-C pair at the end of the acceptor stem of tRNA(His) in aminoacylation.''Nucleic Acids Res.'' '''17''':7855-63</~~span>~~		\|-
			!align=left \|Citation
			\|\|
			'''No author listed''' (1989) Role of the extra G-C pair at the end of the acceptor stem of tRNA(His) in aminoacylation. ''Nucleic Acids Res.'' '''17''':7855-63
			\|-
			!align=left \|Abstract
			\|\|
			All sequenced histidine tRNAs have one additional nucleotide at the 5' end compared with other tRNA species. To investigate the role of this unique structure in aminoacylation, we constructed in vitro transcripts corresponding to the E. coli histidine tRNA sequence and its variants at the G-1-C73 base pair, by using T7 RNA polymerase transcription system. A transcript having a wild-type sequence with no modified bases was a good substrate for histidyl-tRNA synthetase (HisRS), and aminoacylation activity was affected by introduction of a triphosphate at the 5' terminus. Base replacements at position 73 caused a marked decrease of Vmax, and deletion and substitution of the G-1 had a remarkable effect on the aminoacylation. A mutant having an A-1-U73 pair was also not a good substrate for HisRS. Comparison among G-1-deficient mutants showed that A was preferable rather than C as the base at position 73. These data demonstrate that the set of the G-1-C73 pair at the end of the acceptor stem of histidine tRNA is crucial for the catalytic process of aminoacylation.
			\|-
			!align=left \|Links
			\|\|
			[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=2678006 PubMed] [http://www.ncbi.nlm.nih.gov/pmc/articles/PMC334892 PMC334892]

	~~{\|{{Prettytable}} align = 'center' width= '70%'~~
	\|-		\|-
	\|~~{{TableHeadingColor}}~~ \|~~'''Abstract'''~~ \|~~\| All sequenced histidine tRNAs have one additional nucleotide at the 5' end compared with other tRNA species. To investigate the role of this unique structure in aminoacylation~~, ~~we constructed in vitro transcripts corresponding to the E. coli histidine tRNA sequence and its variants at the G~~-~~1-C73 base pair, by using T7~~ RNA ~~polymerase transcription system. A transcript having a wild-type sequence with no modified bases was a good substrate for histidyl-tRNA synthetase (HisRS)~~, ~~and aminoacylation activity was affected by introduction of a triphosphate at the 5' terminus. Base replacements at position 73 caused a marked decrease of Vmax~~, ~~and deletion and substitution of the G~~-1 had a remarkable effect on the aminoacylation. A mutant having an A-1-U73 pair was also not a good substrate for HisRS. Comparison among G-1-deficient mutants showed that A was preferable rather than C as the base at position 73. These data demonstrate that the set of the G-1-C73 pair at the end of the acceptor stem of histidine tRNA is crucial for the catalytic process of aminoacylation.		!align=left \|Keywords
	~~</noinclude>~~		\|\|
	\|-		Acylation; Base Composition; Base Sequence; Cytosine; DNA-Directed RNA Polymerases/metabolism; Escherichia coli/genetics; Guanine; Molecular Sequence Data; Nucleic Acid Conformation; Plasmids; RNA, Transfer, Amino Acid-Specific/genetics; RNA, Transfer, His/genetics; Restriction Mapping; T-Phages/genetics; Transcription, Genetic
	\|{{~~TableHeadingColor~~}} ~~nowrap \|'''Links''' \|\| [http~~:~~//www~~.~~ncbi~~.~~nlm.nih.gov/entrez/query.fcgi?cmd~~=~~Retrieve~~&db=~~pubmed~~&~~dopt~~=~~Abstract~~&~~list_uids~~=~~2678006 PubMed~~]
			\|- class="tableEdit_footer"
			\|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=d41d8cd98f00b204e9800998ecf8427e.129347.M5223935013995&page=129347&pagename={{FULLPAGENAMEE}}&type=1&template=PMID_info_table edit table]</span> \|\|
	\|}		\|}
			<!--box uid=d41d8cd98f00b204e9800998ecf8427e.129347.M5223935013995-->
	==Significance {{HelpIcon\|Help:Literature}} ==		==Significance {{HelpIcon\|Help:Literature}} ==
	{{LitSignificance}}		{{LitSignificance}}

127.0.0.1: /Volumes/r3/t3/ul/working/touchTables/touch_all_tables.php

2010-06-17T20:51:13Z

/Volumes/r3/t3/ul/working/touchTables/touch_all_tables.php

← Older revision		Revision as of 20:51, 17 June 2010
Line 26:		Line 26:
	****************************************************************************************** -->		****************************************************************************************** -->
	{\| id="G47ab2e211f5c0" class=" tableEdit GO_table_reference"		{\| id="G47ab2e211f5c0" class=" tableEdit GO_table_reference"
	\|-		\|- {{table heading style}}
	!\|Gene product!!Qualifier!!GO ID!!GO term name!!Evidence Code!!with/from!!Aspect!!Notes!!Status		!\|Gene product!!Qualifier!!GO ID!!GO term name!!Evidence Code!!with/from!!Aspect!!Notes!!Status

127.0.0.1: Update TableEdit tables.

2010-01-09T04:40:52Z

Update TableEdit tables.

← Older revision		Revision as of 04:40, 9 January 2010
Line 25:		Line 25:
	*		*
	****************************************************************************************** -->		****************************************************************************************** -->
	{\|~~class = 'sortable' border~~="2" ~~cellpadding~~="~~4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;~~"		{\| id="G47ab2e211f5c0" class=" tableEdit GO_table_reference"
	\|- ~~{{table heading style}}~~		\|-
	!\|Gene product!!Qualifier!!GO ID!!GO term name!!Evidence Code!!with/from!!Aspect!!Notes!!Status		!\|Gene product!!Qualifier!!GO ID!!GO term name!!Evidence Code!!with/from!!Aspect!!Notes!!Status

	\|-class=~~'sortbottom'~~		\|- class="tableEdit_footer"
	\|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=63ce1649aab8b3180235b0af7618f667.0.G47ab2e211f5c0&page=0&pagename={{FULLPAGENAMEE}}&type=0&template=GO_table_reference edit table] \|\| \|\| \|\| \|\| \|\| \|\| \|\| \|\|		\|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=63ce1649aab8b3180235b0af7618f667.0.G47ab2e211f5c0&page=0&pagename={{FULLPAGENAMEE}}&type=0&template=GO_table_reference edit table]</span> \|\| \|\| \|\| \|\| \|\| \|\| \|\| \|\|
	\|}		\|}
	<!--box uid=63ce1649aab8b3180235b0af7618f667.0.G47ab2e211f5c0-->		<!--box uid=63ce1649aab8b3180235b0af7618f667.0.G47ab2e211f5c0-->

imported>Wikientrybot: Fix links due to TableEditLinks.php changes.

2009-02-20T04:56:58Z

Fix links due to TableEditLinks.php changes.

← Older revision		Revision as of 04:56, 20 February 2009
Line 21:		Line 21:
	<!--		<!--
	******************************************************************************************		******************************************************************************************
	*		*
	* PLEASE DON'T EDIT THIS TABLE DIRECTLY. Use the edit table link under the table.		* PLEASE DON'T EDIT THIS TABLE DIRECTLY. Use the edit table link under the table.
	*		*
	****************************************************************************************** -->		****************************************************************************************** -->
	{\|class = 'sortable' ~~{{Prettytable}} id~~=~~'237171'~~		{\|class = 'sortable' border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"
	\|- {{table heading style}}		\|- {{table heading style}}
	!Gene product!!Qualifier!!GO ID!!GO term name!!Evidence Code!!with/from!!Aspect!!Notes!!Status		!\|Gene product!!Qualifier!!GO ID!!GO term name!!Evidence Code!!with/from!!Aspect!!Notes!!Status

	\|-class='sortbottom'		\|-class='sortbottom'
	\|[{{SERVER}}{{SCRIPTPATH}}~~/index.php~~?title=Special:TableEdit&id=63ce1649aab8b3180235b0af7618f667.0.G47ab2e211f5c0&page=0&pagename={{FULLPAGENAMEE}} edit table] \|\| \|\| \|\| \|\| \|\| \|\| \|\| \|\|		\|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=63ce1649aab8b3180235b0af7618f667.0.G47ab2e211f5c0&page=0&pagename={{FULLPAGENAMEE}}&type=0&template=GO_table_reference edit table] \|\| \|\| \|\| \|\| \|\| \|\| \|\| \|\|
	\|}		\|}
	<!--box uid=63ce1649aab8b3180235b0af7618f667.0.G47ab2e211f5c0-->		<!--box uid=63ce1649aab8b3180235b0af7618f667.0.G47ab2e211f5c0-->

127.0.0.1: Edited by wikibot

2008-04-30T13:01:38Z

Edited by wikibot

← Older revision		Revision as of 13:01, 30 April 2008
Line 1:		Line 1:

	{{RightTOC}}		{{RightTOC}}

Line 30:		Line 29:
	!Gene product!!Qualifier!!GO ID!!GO term name!!Evidence Code!!with/from!!Aspect!!Notes!!Status		!Gene product!!Qualifier!!GO ID!!GO term name!!Evidence Code!!with/from!!Aspect!!Notes!!Status
	\|-class='sortbottom'		\|-class='sortbottom'
	\|[{{SERVER}}~~/colipedia~~/index.php?title=Special:TableEdit&id=63ce1649aab8b3180235b0af7618f667.0.G47ab2e211f5c0&page=0&pagename={{FULLPAGENAMEE}} edit table] \|\| \|\| \|\| \|\| \|\| \|\| \|\| \|\|		\|[{{SERVER}}{{SCRIPTPATH}}/index.php?title=Special:TableEdit&id=63ce1649aab8b3180235b0af7618f667.0.G47ab2e211f5c0&page=0&pagename={{FULLPAGENAMEE}} edit table] \|\| \|\| \|\| \|\| \|\| \|\| \|\| \|\|
	\|}		\|}
	<!--box uid=63ce1649aab8b3180235b0af7618f667.0.G47ab2e211f5c0-->		<!--box uid=63ce1649aab8b3180235b0af7618f667.0.G47ab2e211f5c0-->

127.0.0.1: Edited by wikibot

2008-04-25T22:41:22Z

Edited by wikibot

← Older revision		Revision as of 22:41, 25 April 2008
Line 1:		Line 1:
	~~<protect>~~
	{{RightTOC}}		{{RightTOC}}

Line 11:		Line 11:
	\|{{TableHeadingColor}} nowrap \|'''Links''' \|\| [http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=2678006 PubMed]		\|{{TableHeadingColor}} nowrap \|'''Links''' \|\| [http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=2678006 PubMed]
	\|}		\|}
	~~</protect>~~
	==Significance {{HelpIcon\|Help:Literature}} ==		==Significance {{HelpIcon\|Help:Literature}} ==
	{{LitSignificance}}		{{LitSignificance}}
Line 19:		Line 19:

	==Annotations {{HelpIcon\|Help:Literature}}==		==Annotations {{HelpIcon\|Help:Literature}}==
	~~<protect>~~<!--box uid=63ce1649aab8b3180235b0af7618f667.0.G47ab2e211f5c0-->		<!--box uid=63ce1649aab8b3180235b0af7618f667.0.G47ab2e211f5c0-->
	<!--		<!--
	******************************************************************************************		******************************************************************************************
Line 32:		Line 32:
	\|[{{SERVER}}/colipedia/index.php?title=Special:TableEdit&id=63ce1649aab8b3180235b0af7618f667.0.G47ab2e211f5c0&page=0&pagename={{FULLPAGENAMEE}} edit table] \|\| \|\| \|\| \|\| \|\| \|\| \|\| \|\|		\|[{{SERVER}}/colipedia/index.php?title=Special:TableEdit&id=63ce1649aab8b3180235b0af7618f667.0.G47ab2e211f5c0&page=0&pagename={{FULLPAGENAMEE}} edit table] \|\| \|\| \|\| \|\| \|\| \|\| \|\| \|\|
	\|}		\|}
	<!--box uid=63ce1649aab8b3180235b0af7618f667.0.G47ab2e211f5c0--~~></protect~~>		<!--box uid=63ce1649aab8b3180235b0af7618f667.0.G47ab2e211f5c0-->

	==EcoliWiki Links {{HelpIcon\|Help:Literature}} ==		==EcoliWiki Links {{HelpIcon\|Help:Literature}} ==

74.192.221.37: New PMID: Page!

2008-02-07T16:13:21Z

New PMID: Page!

New page

<protect>
{{RightTOC}}

<span style = 'font-size: large'> '''Himeno, H, Hasegawa, T, Ueda, T, Watanabe, K, Miura, K and Shimizu, M''' (1989) Role of the extra G-C pair at the end of the acceptor stem of tRNA(His) in aminoacylation.''Nucleic Acids Res.'' '''17''':7855-63</span>

{|{{Prettytable}} align = 'center' width= '70%'
|-
|{{TableHeadingColor}} |'''Abstract''' || All sequenced histidine tRNAs have one additional nucleotide at the 5' end compared with other tRNA species. To investigate the role of this unique structure in aminoacylation, we constructed in vitro transcripts corresponding to the E. coli histidine tRNA sequence and its variants at the G-1-C73 base pair, by using T7 RNA polymerase transcription system. A transcript having a wild-type sequence with no modified bases was a good substrate for histidyl-tRNA synthetase (HisRS), and aminoacylation activity was affected by introduction of a triphosphate at the 5' terminus. Base replacements at position 73 caused a marked decrease of Vmax, and deletion and substitution of the G-1 had a remarkable effect on the aminoacylation. A mutant having an A-1-U73 pair was also not a good substrate for HisRS. Comparison among G-1-deficient mutants showed that A was preferable rather than C as the base at position 73. These data demonstrate that the set of the G-1-C73 pair at the end of the acceptor stem of histidine tRNA is crucial for the catalytic process of aminoacylation.
</noinclude>
|-
|{{TableHeadingColor}} nowrap |'''Links''' || [http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=2678006 PubMed]
|}
</protect>
==Significance {{HelpIcon|Help:Literature}} ==
{{LitSignificance}}

== Useful Materials and Methods {{HelpIcon|Help:Literature}}==
{{LitMaterials}}

==Annotations {{HelpIcon|Help:Literature}}==
<protect>

{|class = 'sortable' {{Prettytable}} id='237171'
|- {{table heading style}}
!Gene product!!Qualifier!!GO ID!!GO term name!!Evidence Code!!with/from!!Aspect!!Notes!!Status
|-class='sortbottom'
|[{{SERVER}}/colipedia/index.php?title=Special:TableEdit&id=63ce1649aab8b3180235b0af7618f667.0.G47ab2e211f5c0&page=0&pagename={{FULLPAGENAMEE}} edit table] || || || || || || || ||
|}
</protect>

==EcoliWiki Links {{HelpIcon|Help:Literature}} ==
{{LitLinks}}

==References==
{{RefHelp}}
<references/>