Helical Wheel Projection - Revision history

127.0.0.1: /Volumes/r3/t3/ul/working/touchTables/touch_all_tables.php

2010-06-17T17:39:07Z

/Volumes/r3/t3/ul/working/touchTables/touch_all_tables.php

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	{\| id="X4a492c9e5ad7b" class=" tableEdit Biotools"		{\| {{Prettytable}} width='30%' align="right" id="X4a492c9e5ad7b" class=" tableEdit Biotools"

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	!align=left \|Link/URL:		!align=left {{table heading style}} \|Link/URL:
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	See Links Section		See Links Section
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	!align=left \|What:		!align=left {{table heading style}} \|What:
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	Visualization of amino acids in an alpha helix viewed from the N or C terminus.		Visualization of amino acids in an alpha helix viewed from the N or C terminus.
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	!align=left \|Who:		!align=left {{table heading style}} \|Who:
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127.0.0.1: Update TableEdit tables.

2010-01-09T01:32:58Z

Update TableEdit tables.

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	!align=left ~~{{table heading style}}~~ \|Link/URL:		!align=left \|Link/URL:
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	See Links Section		See Links Section
	\|-		\|-
	!align=left ~~{{table heading style}}~~ \|What:		!align=left \|What:
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	Visualization of amino acids in an alpha helix viewed from the N or C terminus.		Visualization of amino acids in an alpha helix viewed from the N or C terminus.
	\|-		\|-
	!align=left ~~{{table heading style}}~~ \|Who:		!align=left \|Who:
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Amandasupak: Table edited by Amandasupak via TableEdit

2009-06-29T21:06:34Z

Table edited by Amandasupak via TableEdit

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	!align=left {{table heading style}} \|Link/URL:		!align=left {{table heading style}} \|Link/URL:
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			See Links Section
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	!align=left {{table heading style}} \|What:		!align=left {{table heading style}} \|What:
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			Visualization of amino acids in an alpha helix viewed from the N or C terminus.
	\|-		\|-
	!align=left {{table heading style}} \|Who:		!align=left {{table heading style}} \|Who:
			\|\|


	\|-class='sortbottom'		\|-class='sortbottom'
	\|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=63ce1649aab8b3180235b0af7618f667.164938.X4a492c9e5ad7b&page=164938&pagename={{FULLPAGENAMEE}}&type=1&template=Biotools edit table]		\|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=63ce1649aab8b3180235b0af7618f667.164938.X4a492c9e5ad7b&page=164938&pagename={{FULLPAGENAMEE}}&type=1&template=Biotools edit table] \|\|
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Amandasupak: Create Biotools Table

2009-06-29T21:05:34Z

Create Biotools Table

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	{{See\|Help:Bioinformatics Tools\|tools}}		{{See\|Help:Bioinformatics Tools\|tools}}

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JimHu: /* Short Description */

2009-06-26T01:11:18Z

Short Description

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	== Short Description ==		== Short Description ==
	{{UserContentHelp}}		{{UserContentHelp}}
	[[Image:Wheel.png\|A helical wheel generated by wheel.pl\|thumb\|~~500px~~]]		[[Image:Wheel.png\|A helical wheel generated by wheel.pl\|thumb\|250px]]
	It is often useful to visualize the projection of amino acids in an alpha helix viewed from the N or C terminus. Such a view is called a helical wheel. Helical wheels often reveal how certain residues or sites of mutation are enriched on one face of a predicted helix.		It is often useful to visualize the projection of amino acids in an alpha helix viewed from the N or C terminus. Such a view is called a helical wheel. Helical wheels often reveal how certain residues or sites of mutation are enriched on one face of a predicted helix.

JimHu: /* Requirements */

2009-06-26T01:10:24Z

Requirements

← Older revision		Revision as of 01:10, 26 June 2009
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	* [http://www.kael.net/helical.htm kael.net]		* [http://www.kael.net/helical.htm kael.net]

	~~== Requirements ==~~
	~~Hardware/Software requirements, if applicable~~

	== User notes ==		== User notes ==

JimHu: /* Short Description */

2009-06-26T00:24:56Z

Short Description

← Older revision		Revision as of 00:24, 26 June 2009
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	== Short Description ==		== Short Description ==
	{{UserContentHelp}}		{{UserContentHelp}}
			[[Image:Wheel.png\|A helical wheel generated by wheel.pl\|thumb\|500px]]
	It is often useful to visualize the projection of amino acids in an alpha helix viewed from the N or C terminus. Such a view is called a helical wheel. Helical wheels often reveal how certain residues or sites of mutation are enriched on one face of a predicted helix.		It is often useful to visualize the projection of amino acids in an alpha helix viewed from the N or C terminus. Such a view is called a helical wheel. Helical wheels often reveal how certain residues or sites of mutation are enriched on one face of a predicted helix.

JimHu: /* Links */

2009-06-26T00:19:34Z

Links

← Older revision		Revision as of 00:19, 26 June 2009
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	== Links ==		== Links ==
	Several sites have web-based software to draw helical wheels		Several sites have web-based software to draw helical wheels
			* [http://rzlab.ucr.edu/scripts/ Raphael Zidovetzki's lab] at UC-Riverside. This version allows a lot of customization of the view. Perl source code is also provided.
			** [http://trimer.tamu.edu/cgi-bin/wheel/wheel.pl modified version] of the above at Texas A&M, patched to fix the view from the C-terminus and to manually override the hydrophobicity value for Valine.
			* [http://cti.itc.virginia.edu/~cmg/Demo/wheel/wheelApp.html Univ. of Virginia]
			* [http://www-nmr.cabm.rutgers.edu/bioinformatics/Proteomic_tools/Helical_wheel/ CABM at Rutgers]
			* [http://www.kael.net/helical.htm kael.net]

	== Requirements ==		== Requirements ==

JimHu: /* See Also */

2009-06-26T00:12:37Z

JimHu: /* Links */

2009-06-26T00:11:33Z

Links

← Older revision		Revision as of 00:11, 26 June 2009
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	== Links ==		== Links ==
	~~Links to~~ sites ~~that run the~~ software ~~or where it can be obtained~~		Several sites have web-based software to draw helical wheels


	== Requirements ==		== Requirements ==

← Older revision		Revision as of 00:12, 26 June 2009
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	== See Also ==		== See Also ==
			* [[wikipedia:Helical_wheel\|Helical Wheel at Wikipedia]]

	== References ==		== References ==