EchoBASE - Revision history

127.0.0.1: /Volumes/r3/t3/ul/working/touchTables/touch_all_tables.php

2010-05-23T00:11:31Z

/Volumes/r3/t3/ul/working/touchTables/touch_all_tables.php

← Older revision		Revision as of 00:11, 23 May 2010
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	!align=left \|Link/URL:		!align=left {{table heading style}} \|Link/URL:
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	[http://www.ecoli-york.org/ EchoBASE]		[http://www.ecoli-york.org/ EchoBASE]
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	!align=left \|What:		!align=left {{table heading style}} \|What:
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	Curated experimental and bioinformatic information about E. coli genes and gene products		Curated experimental and bioinformatic information about E. coli genes and gene products
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	!align=left \|Who:		!align=left {{table heading style}} \|Who:
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	*Raju Misra		*Raju Misra
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	*Gavin Thomas		*Gavin Thomas
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	!align=left \|Updates:		!align=left {{table heading style}} \|Updates:
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	!align=left \|Upcoming events:		!align=left {{table heading style}} \|Upcoming events:
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	!align=left \|Web Services:		!align=left {{table heading style}} \|Web Services:
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127.0.0.1: Update TableEdit tables.

2010-01-09T00:52:38Z

Update TableEdit tables.

← Older revision		Revision as of 00:52, 9 January 2010
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	!align=left ~~{{table heading style}}~~ \|Link/URL:		!align=left \|Link/URL:
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	[http://www.ecoli-york.org/ EchoBASE]		[http://www.ecoli-york.org/ EchoBASE]
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	!align=left ~~{{table heading style}}~~ \|What:		!align=left \|What:
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	Curated experimental and bioinformatic information about E. coli genes and gene products		Curated experimental and bioinformatic information about E. coli genes and gene products
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	!align=left ~~{{table heading style}}~~ \|Who:		!align=left \|Who:
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	*Raju Misra		*Raju Misra
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	*Gavin Thomas		*Gavin Thomas
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	!align=left ~~{{table heading style}}~~ \|Updates:		!align=left \|Updates:
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127.0.0.1: Fixing references section.

2009-06-26T16:41:09Z

Fixing references section.

← Older revision		Revision as of 16:41, 26 June 2009
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	=References=		=References=
			{{BacktoTop}}
			{{RefHelp}}
			<references />
	Thomas, G.H. (1999) Completing the ''E. coli'' proteome: a database of gene products characterised since completion of the genome sequence. Bioinformatics 15:860-861.		Thomas, G.H. (1999) Completing the ''E. coli'' proteome: a database of gene products characterised since completion of the genome sequence. Bioinformatics 15:860-861.

	Misra, R.V. et al. (2005) EchoBASE: an integrated post-genomic database for ''Escherichia coli''. Nucleic Acids Res. 33(Database issue):D329-33		Misra, R.V. et al. (2005) EchoBASE: an integrated post-genomic database for ''Escherichia coli''. Nucleic Acids Res. 33(Database issue):D329-33

	=External Links=		=External Links=
	[http://ecoli-york.org {{PAGENAME}}]		[http://ecoli-york.org {{PAGENAME}}]
	==Discussion of {{PAGENAME}} on other websites==		==Discussion of {{PAGENAME}} on other websites==

Bmcintosh: /* Content */

2009-06-25T15:48:41Z

Content

← Older revision		Revision as of 15:48, 25 June 2009
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	As of July 11, 2006, there are 303 curated references in EchoBASE. The database contains descriptions of papers with information on the function of individual gene products, as well as the actual data from larger, post-genomic studies, which can be searched and manipulated. There are 106 curated experiments which are grouped by type: Biochemistry (10), Bioinformatics (11), Genetics (13), Microarray (6), Protein-Protein Interaction (3), Proteomics (15), Structure (46), and Transcript Level (2).		As of July 11, 2006, there are 303 curated references in EchoBASE. The database contains descriptions of papers with information on the function of individual gene products, as well as the actual data from larger, post-genomic studies, which can be searched and manipulated. There are 106 curated experiments which are grouped by type: Biochemistry (10), Bioinformatics (11), Genetics (13), Microarray (6), Protein-Protein Interaction (3), Proteomics (15), Structure (46), and Transcript Level (2).

	Other features of EchoBASE are Orphan Enzymes (>90 enzyme activities that have been measured in E. coli, but not mapped to a gene product or gene), EchoABC (a comprehensive list of ABC transporters with links to references and structures, if known), [http://www.york.ac.uk/res/thomas/echolocadv.cfm EchoLOCATION] (experimentally determined or predicted subcellular location of ''E. coli'' products), and EchoPDB (a list of all known structures for E. coli proteins with links to references and the PDB).		Other features of EchoBASE are Orphan Enzymes (>90 enzyme activities that have been measured in E. coli, but not mapped to a gene product or gene), EchoABC (a comprehensive list of ABC transporters with links to references and structures, if known), [http://www.york.ac.uk/res/thomas/echolocadv.cfm EchoLOCATION] (experimentally determined or predicted subcellular location of ''E. coli'' products<ref name='PMID:19015139'/>), and EchoPDB (a list of all known structures for E. coli proteins with links to references and the PDB).

	[[Category:E. coli protein localization]]		[[Category:E. coli protein localization]]

Amandasupak: Table edited by Amandasupak via TableEdit

2009-06-09T19:18:30Z

Table edited by Amandasupak via TableEdit

← Older revision		Revision as of 19:18, 9 June 2009
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	!align=left {{table heading style}} \|Who:		!align=left {{table heading style}} \|Who:
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	Raju Misra, Richard Horler~~, and~~ Gavin Thomas		*Raju Misra
			*Richard Horler
			*Gavin Thomas
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	!align=left {{table heading style}} \|Updates:		!align=left {{table heading style}} \|Updates:

Amandasupak: Table edited by Amandasupak via TableEdit

2009-06-04T21:58:42Z

Table edited by Amandasupak via TableEdit

← Older revision		Revision as of 21:58, 4 June 2009
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	!align=left {{table heading style}} \|Link/URL:		!align=left {{table heading style}} \|Link/URL:
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	[http://www.ecoli-york.org/ EchoBASE] ~~(www.ecoli-york.org)~~		[http://www.ecoli-york.org/ EchoBASE]
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	!align=left {{table heading style}} \|What:		!align=left {{table heading style}} \|What:

JimHu at 05:41, 2 June 2009

2009-06-02T05:41:47Z

← Older revision		Revision as of 05:41, 2 June 2009
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	[[Category:Databases]]		[[Category:Databases]]
	[[Category:E. coli Databases]]		[[Category:E. coli Databases]]
			[[Category:IECA Portal]]
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Amandasupak: Table edited by Amandasupak via TableEdit

2009-06-01T21:34:09Z

Table edited by Amandasupak via TableEdit

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	!align=left {{table heading style}} \|What:		!align=left {{table heading style}} \|What:
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	~~curated~~ experimental and bioinformatic information about E. coli genes and gene products		Curated experimental and bioinformatic information about E. coli genes and gene products
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	!align=left {{table heading style}} \|Who:		!align=left {{table heading style}} \|Who:

DanielRenfro: Table edited by DanielRenfro via TableEdit

2009-06-01T21:09:01Z

Table edited by DanielRenfro via TableEdit

← Older revision		Revision as of 21:09, 1 June 2009
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	!align=left {{table heading style}} \|Link/URL:		!align=left {{table heading style}} \|Link/URL:
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			[http://www.ecoli-york.org/ EchoBASE] (www.ecoli-york.org)
	\|-		\|-
	!align=left {{table heading style}} \|What:		!align=left {{table heading style}} \|What:
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			curated experimental and bioinformatic information about E. coli genes and gene products
	\|-		\|-
	!align=left {{table heading style}} \|Who:		!align=left {{table heading style}} \|Who:
			\|\|
			Raju Misra, Richard Horler, and Gavin Thomas
	\|-		\|-
	!align=left {{table heading style}} \|Updates:		!align=left {{table heading style}} \|Updates:
			\|\|

	\|-		\|-
	!align=left {{table heading style}} \|Upcoming events:		!align=left {{table heading style}} \|Upcoming events:
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	\|-		\|-
	!align=left {{table heading style}} \|Web Services:		!align=left {{table heading style}} \|Web Services:
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	\|-class='sortbottom'		\|-class='sortbottom'
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DanielRenfro at 21:06, 1 June 2009

2009-06-01T21:06:17Z

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	[[Category:E. coli Databases]]		[[Category:E. coli Databases]]

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	\|-		\|-
	~~\| width~~=~~'30%'~~ \| ~~Who~~:		!align=left {{table heading style}} \|Link/URL:
	~~\| Raju Misra, Richard Horler, and Gavin Thomas~~
	\|-		\|-
	~~\| width~~=~~'30%'~~ \| What:		!align=left {{table heading style}} \|What:
	~~\| curated experimental and bioinformatic information about ''E. coli'' genes and gene products~~
	\|-		\|-
	~~\| Where:~~		!align=left {{table heading style}} \|Who:
	~~\| [http://www.ecoli-york.org~~ {{~~PAGENAME~~}}~~] (www.ecoli-york.org)~~
	\|-		\|-
	\| Updates		!align=left {{table heading style}} \|Updates:
	\|
	\|-		\|-
	\| Upcoming events		!align=left {{table heading style}} \|Upcoming events:
	~~\| ''link to event calendar, if applicable''~~
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	\| Web Services		!align=left {{table heading style}} \|Web Services:
	\|
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			\|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=63ce1649aab8b3180235b0af7618f667.1664.B4a2442c8d4868&page=1664&pagename={{FULLPAGENAMEE}}&type=1&template=Database_table edit table]
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			<!--box uid=63ce1649aab8b3180235b0af7618f667.1664.B4a2442c8d4868--></protect>

	=About {{PAGENAME}}=		=About {{PAGENAME}}=
	[http://ecoli-york.org {{PAGENAME}}] curates experimental and bioinformatic information about ''E. coli'' genes and their gene products. The aim of this database is to provide information that will lead to functional predictions for gene products of unknown function. ''Echo''BASE is part of the [http://www.uni-giessen.de/~gx1052/IECA/ieca.html International ''E. coli'' Alliance].		[http://ecoli-york.org {{PAGENAME}}] curates experimental and bioinformatic information about ''E. coli'' genes and their gene products. The aim of this database is to provide information that will lead to functional predictions for gene products of unknown function. ''Echo''BASE is part of the [http://www.uni-giessen.de/~gx1052/IECA/ieca.html International ''E. coli'' Alliance].