EcoliWiki - User contributions [en]

Rate Limiting Enzymes Database (RLEdb)

2009-11-19T07:19:45Z

Zhaomin: /* Browsing */

{{Pagetop}} 
{{See|Help:Databases|databases}}

<protect>

{|border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" {{Prettytable}} width='30%' align="right"

|-
!align=left {{table heading style}} |Link/URL:
||
[http://rle.cbi.pku.edu.cn/home.cgi RLEdb]
|-
!align=left {{table heading style}} |What:
||
A central repository of metabolic rate-limiting enzymes as well as their regulatory information include their related transcriptional factors, reversible phosphorylation sites and inhibitors.
|-
!align=left {{table heading style}} |Who:
||
Center for Bioinofmtics
Peking University
|-
!align=left {{table heading style}} |Updates:
||

|-
!align=left {{table heading style}} |Upcoming events:
||
More comprehensive rate-limiting enzymes data from literature or similarity mapping.
|-
!align=left {{table heading style}} |Web Services:
||
Not provide now, however, all the data are freely download.

|-class='sortbottom'
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=63ce1649aab8b3180235b0af7618f667.164848.W4a42862fea029&page=164848&pagename={{FULLPAGENAMEE}}&type=1&template=Database_table edit table] ||
|}
</protect>

==About {{PAGENAME}}==
[[Image:Reldb_home.jpg|300px|thumb|right|Home Page]]

''Add general information here''
[{{{1|link}}} {{PAGENAME}}] is...<ref name='PMID:19468287'/>

==Content==
The Rate-Limiting Enzyme regulation database (RLEdb) was developed to serve as a central repository of metabolic rate-limiting enzymes as well as their regulatory information include their related transcriptional factors, reversible phosphorylation sites and inhibitors.

Our database allows you to:

1. searching and browsing the curated rate-limiting enzymes by their pathways, subcelluar localizations, expressed tissues and genome localization

2. browsing regulatory information of rate-limiting enzymes including their related transcription factors, phosphorylation regulatory site and inhibitors

3. systematic comparing the rate-limiting enzyme profiles between different organisms

4. overview of all rate-limiting enzymes from each KEGG maps in a color-marked style

5. systematic study of metabolic pathways regulation from transcription factor, phosphorylation or inhibitor aspects

==Using {{PAGENAME}} ==
===Browsing===
The RLEdb provide user-friendly browser system including:

1. browse by organisms or enzyme code (Comparation rate-limiting roles in different organisms)

2. browse by regulatory type

3. browse all data from different features including chromosome localization, subcellular localization and tissue expression

4. also users can give an overview with color marking of all the rate-limiting enzymes in each KEGG pathway map.

===Searching===
The RLEdb provide text query and sequence similarity search by Blast.

===Usage examples===
The tutorial for RLEdb is [ http://rle.cbi.pku.edu.cn/tutorial.cgi ]

==Other sites with related content {{HelpIcon|Help:Databases}}==
No other related resource focus on rate-limiting enzymes until now (2009-11-19).

==Technology==
Implemented in CGI and provide freely data download.
===Web Services/API===
Not provide webservice API until now.

==Discussion==

==References==
{{BacktoTop}}
{{RefHelp}}
<references />

==External Links==
[{{{1|link}}} {{PAGENAME}}] URL:{{{1|link}}}
[http://rle.cbi.pku.edu.cn/home.cgi RLEdb]

===Discussion of {{PAGENAME}} on other websites===

[[Category:Databases]]

Rate Limiting Enzymes Database (RLEdb)

2009-11-19T07:18:57Z

Zhaomin: /* Technology */

{{Pagetop}} 
{{See|Help:Databases|databases}}

<protect>

{|border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" {{Prettytable}} width='30%' align="right"

|-
!align=left {{table heading style}} |Link/URL:
||
[http://rle.cbi.pku.edu.cn/home.cgi RLEdb]
|-
!align=left {{table heading style}} |What:
||
A central repository of metabolic rate-limiting enzymes as well as their regulatory information include their related transcriptional factors, reversible phosphorylation sites and inhibitors.
|-
!align=left {{table heading style}} |Who:
||
Center for Bioinofmtics
Peking University
|-
!align=left {{table heading style}} |Updates:
||

|-
!align=left {{table heading style}} |Upcoming events:
||
More comprehensive rate-limiting enzymes data from literature or similarity mapping.
|-
!align=left {{table heading style}} |Web Services:
||
Not provide now, however, all the data are freely download.

|-class='sortbottom'
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=63ce1649aab8b3180235b0af7618f667.164848.W4a42862fea029&page=164848&pagename={{FULLPAGENAMEE}}&type=1&template=Database_table edit table] ||
|}
</protect>

==About {{PAGENAME}}==
[[Image:Reldb_home.jpg|300px|thumb|right|Home Page]]

''Add general information here''
[{{{1|link}}} {{PAGENAME}}] is...<ref name='PMID:19468287'/>

==Content==
The Rate-Limiting Enzyme regulation database (RLEdb) was developed to serve as a central repository of metabolic rate-limiting enzymes as well as their regulatory information include their related transcriptional factors, reversible phosphorylation sites and inhibitors.

Our database allows you to:

1. searching and browsing the curated rate-limiting enzymes by their pathways, subcelluar localizations, expressed tissues and genome localization

2. browsing regulatory information of rate-limiting enzymes including their related transcription factors, phosphorylation regulatory site and inhibitors

3. systematic comparing the rate-limiting enzyme profiles between different organisms

4. overview of all rate-limiting enzymes from each KEGG maps in a color-marked style

5. systematic study of metabolic pathways regulation from transcription factor, phosphorylation or inhibitor aspects

==Using {{PAGENAME}} ==
===Browsing===
The RLEdb provide user-friendly browser system including:

1. browse by organisms or enzyme code (Comparation rate-limiting roles in different organisms)
2. browse by regulatory type
3. browse all data from different features including chromosome localization, subcellular localization and tissue expression
4. also users can give an overview with color marking of all the rate-limiting enzymes in each KEGG pathway map.

===Searching===
The RLEdb provide text query and sequence similarity search by Blast.

===Usage examples===
The tutorial for RLEdb is [ http://rle.cbi.pku.edu.cn/tutorial.cgi ]

==Other sites with related content {{HelpIcon|Help:Databases}}==
No other related resource focus on rate-limiting enzymes until now (2009-11-19).

==Technology==
Implemented in CGI and provide freely data download.
===Web Services/API===
Not provide webservice API until now.

==Discussion==

==References==
{{BacktoTop}}
{{RefHelp}}
<references />

==External Links==
[{{{1|link}}} {{PAGENAME}}] URL:{{{1|link}}}
[http://rle.cbi.pku.edu.cn/home.cgi RLEdb]

===Discussion of {{PAGENAME}} on other websites===

[[Category:Databases]]

Rate Limiting Enzymes Database (RLEdb)

2009-11-19T06:59:23Z

Zhaomin: /* Browsing */

{{Pagetop}} 
{{See|Help:Databases|databases}}

<protect>

{|border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" {{Prettytable}} width='30%' align="right"

|-
!align=left {{table heading style}} |Link/URL:
||
[http://rle.cbi.pku.edu.cn/home.cgi RLEdb]
|-
!align=left {{table heading style}} |What:
||
A central repository of metabolic rate-limiting enzymes as well as their regulatory information include their related transcriptional factors, reversible phosphorylation sites and inhibitors.
|-
!align=left {{table heading style}} |Who:
||
Center for Bioinofmtics
Peking University
|-
!align=left {{table heading style}} |Updates:
||

|-
!align=left {{table heading style}} |Upcoming events:
||
More comprehensive rate-limiting enzymes data from literature or similarity mapping.
|-
!align=left {{table heading style}} |Web Services:
||
Not provide now, however, all the data are freely download.

|-class='sortbottom'
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=63ce1649aab8b3180235b0af7618f667.164848.W4a42862fea029&page=164848&pagename={{FULLPAGENAMEE}}&type=1&template=Database_table edit table] ||
|}
</protect>

==About {{PAGENAME}}==
[[Image:Reldb_home.jpg|300px|thumb|right|Home Page]]

''Add general information here''
[{{{1|link}}} {{PAGENAME}}] is...<ref name='PMID:19468287'/>

==Content==
The Rate-Limiting Enzyme regulation database (RLEdb) was developed to serve as a central repository of metabolic rate-limiting enzymes as well as their regulatory information include their related transcriptional factors, reversible phosphorylation sites and inhibitors.

Our database allows you to:

1. searching and browsing the curated rate-limiting enzymes by their pathways, subcelluar localizations, expressed tissues and genome localization

2. browsing regulatory information of rate-limiting enzymes including their related transcription factors, phosphorylation regulatory site and inhibitors

3. systematic comparing the rate-limiting enzyme profiles between different organisms

4. overview of all rate-limiting enzymes from each KEGG maps in a color-marked style

5. systematic study of metabolic pathways regulation from transcription factor, phosphorylation or inhibitor aspects

==Using {{PAGENAME}} ==
===Browsing===
The RLEdb provide user-friendly browser system including:

1. browse by organisms or enzyme code (Comparation rate-limiting roles in different organisms)
2. browse by regulatory type
3. browse all data from different features including chromosome localization, subcellular localization and tissue expression
4. also users can give an overview with color marking of all the rate-limiting enzymes in each KEGG pathway map.

===Searching===
The RLEdb provide text query and sequence similarity search by Blast.

===Usage examples===
The tutorial for RLEdb is [ http://rle.cbi.pku.edu.cn/tutorial.cgi ]

==Other sites with related content {{HelpIcon|Help:Databases}}==
No other related resource focus on rate-limiting enzymes until now (2009-11-19).

==Technology==
===Web Services/API===

==Discussion==

==References==
{{BacktoTop}}
{{RefHelp}}
<references />

==External Links==
[{{{1|link}}} {{PAGENAME}}] URL:{{{1|link}}}
[http://rle.cbi.pku.edu.cn/home.cgi RLEdb]

===Discussion of {{PAGENAME}} on other websites===

[[Category:Databases]]

Rate Limiting Enzymes Database (RLEdb)

2009-11-19T06:58:23Z

Zhaomin: /* Using {{PAGENAME}} */

{{Pagetop}} 
{{See|Help:Databases|databases}}

<protect>

{|border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" {{Prettytable}} width='30%' align="right"

|-
!align=left {{table heading style}} |Link/URL:
||
[http://rle.cbi.pku.edu.cn/home.cgi RLEdb]
|-
!align=left {{table heading style}} |What:
||
A central repository of metabolic rate-limiting enzymes as well as their regulatory information include their related transcriptional factors, reversible phosphorylation sites and inhibitors.
|-
!align=left {{table heading style}} |Who:
||
Center for Bioinofmtics
Peking University
|-
!align=left {{table heading style}} |Updates:
||

|-
!align=left {{table heading style}} |Upcoming events:
||
More comprehensive rate-limiting enzymes data from literature or similarity mapping.
|-
!align=left {{table heading style}} |Web Services:
||
Not provide now, however, all the data are freely download.

|-class='sortbottom'
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=63ce1649aab8b3180235b0af7618f667.164848.W4a42862fea029&page=164848&pagename={{FULLPAGENAMEE}}&type=1&template=Database_table edit table] ||
|}
</protect>

==About {{PAGENAME}}==
[[Image:Reldb_home.jpg|300px|thumb|right|Home Page]]

''Add general information here''
[{{{1|link}}} {{PAGENAME}}] is...<ref name='PMID:19468287'/>

==Content==
The Rate-Limiting Enzyme regulation database (RLEdb) was developed to serve as a central repository of metabolic rate-limiting enzymes as well as their regulatory information include their related transcriptional factors, reversible phosphorylation sites and inhibitors.

Our database allows you to:

1. searching and browsing the curated rate-limiting enzymes by their pathways, subcelluar localizations, expressed tissues and genome localization

2. browsing regulatory information of rate-limiting enzymes including their related transcription factors, phosphorylation regulatory site and inhibitors

3. systematic comparing the rate-limiting enzyme profiles between different organisms

4. overview of all rate-limiting enzymes from each KEGG maps in a color-marked style

5. systematic study of metabolic pathways regulation from transcription factor, phosphorylation or inhibitor aspects

==Using {{PAGENAME}} ==
===Browsing===
The RLEdb provide user-friendly browser system including:

1. browse by organisms or enzyme code (Comparation rate-limiting roles in different organisms)
2. browse by regulatory type
3. browse all data from different features including chromosome localization, subcellular localization and tissue expression
4. also users can give an overview with color marking of all the rate-limiting enzymes in each KEGG pathway map.

===Searching===
The RLEdb provide text query and sequence similarity search by Blast.

===Usage examples===
The tutorial for RLEdb is [ http://rle.cbi.pku.edu.cn/tutorial.cgi ]

==Other sites with related content {{HelpIcon|Help:Databases}}==
No other related resource focus on rate-limiting enzymes until now (2009-11-19).

==Technology==
===Web Services/API===

==Discussion==

==References==
{{BacktoTop}}
{{RefHelp}}
<references />

==External Links==
[{{{1|link}}} {{PAGENAME}}] URL:{{{1|link}}}
[http://rle.cbi.pku.edu.cn/home.cgi RLEdb]

===Discussion of {{PAGENAME}} on other websites===

[[Category:Databases]]

Rate Limiting Enzymes Database (RLEdb)

2009-11-19T06:52:43Z

Zhaomin: /* Content */

{{Pagetop}} 
{{See|Help:Databases|databases}}

<protect>

{|border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" {{Prettytable}} width='30%' align="right"

|-
!align=left {{table heading style}} |Link/URL:
||
[http://rle.cbi.pku.edu.cn/home.cgi RLEdb]
|-
!align=left {{table heading style}} |What:
||
A central repository of metabolic rate-limiting enzymes as well as their regulatory information include their related transcriptional factors, reversible phosphorylation sites and inhibitors.
|-
!align=left {{table heading style}} |Who:
||
Center for Bioinofmtics
Peking University
|-
!align=left {{table heading style}} |Updates:
||

|-
!align=left {{table heading style}} |Upcoming events:
||
More comprehensive rate-limiting enzymes data from literature or similarity mapping.
|-
!align=left {{table heading style}} |Web Services:
||
Not provide now, however, all the data are freely download.

|-class='sortbottom'
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=63ce1649aab8b3180235b0af7618f667.164848.W4a42862fea029&page=164848&pagename={{FULLPAGENAMEE}}&type=1&template=Database_table edit table] ||
|}
</protect>

==About {{PAGENAME}}==
[[Image:Reldb_home.jpg|300px|thumb|right|Home Page]]

''Add general information here''
[{{{1|link}}} {{PAGENAME}}] is...<ref name='PMID:19468287'/>

==Content==
The Rate-Limiting Enzyme regulation database (RLEdb) was developed to serve as a central repository of metabolic rate-limiting enzymes as well as their regulatory information include their related transcriptional factors, reversible phosphorylation sites and inhibitors.

Our database allows you to:

1. searching and browsing the curated rate-limiting enzymes by their pathways, subcelluar localizations, expressed tissues and genome localization

2. browsing regulatory information of rate-limiting enzymes including their related transcription factors, phosphorylation regulatory site and inhibitors

3. systematic comparing the rate-limiting enzyme profiles between different organisms

4. overview of all rate-limiting enzymes from each KEGG maps in a color-marked style

5. systematic study of metabolic pathways regulation from transcription factor, phosphorylation or inhibitor aspects

==Using {{PAGENAME}} ==
===Browsing===
===Searching===
===Usage examples===
''Add links to additional pages describing success stories here.''

==Other sites with related content {{HelpIcon|Help:Databases}}==
No other related resource focus on rate-limiting enzymes until now (2009-11-19).

==Technology==
===Web Services/API===

==Discussion==

==References==
{{BacktoTop}}
{{RefHelp}}
<references />

==External Links==
[{{{1|link}}} {{PAGENAME}}] URL:{{{1|link}}}
[http://rle.cbi.pku.edu.cn/home.cgi RLEdb]

===Discussion of {{PAGENAME}} on other websites===

[[Category:Databases]]

Rate Limiting Enzymes Database (RLEdb)

2009-11-19T06:50:42Z

Zhaomin: /* External Links */

Rate Limiting Enzymes Database (RLEdb)

2009-11-19T06:49:36Z

Zhaomin: /* Other sites with related content {{HelpIcon|Help:Databases}} */

Rate Limiting Enzymes Database (RLEdb)

2009-11-19T06:47:58Z

Zhaomin: Table edited by Zhaomin via TableEdit