EcoliWiki - User contributions [en]

casA:Quickview

2010-03-31T10:59:41Z

Wagner: Table edited by Wagner via TableEdit

{{#css:Suppresslinks.css}}<css>{{:Suppresslinks.css}}</css>
<noinclude>{{TabsTop}}
{{Tab On|Quickview|casA}}{{Tab|Gene|casA}}{{Tab|Gene Product(s)|casA}}{{Tab|Expression|casA}}{{Tab|Evolution|casA}}{{Tab|On One Page|casA}}{{TabsBottom}}
{|
|- style="background-color:white; border:solid 2px #CCFFFF; text-align:center; white-space: nowrap;"
|{{Sub}}[[#References| References]]
|{{Sub}}[[Talk:{{PAGENAMEE}}| Suggestions]]
|}
</noinclude>
<protect>
{{Quickview_table_help}}
{| id="R49b030631f67d" class=" tableEdit New_Quickview_Table"

|-
!align=left {{table_heading_style}} |Standard Name
||
''casA''
|-
!align=left {{table_heading_style}} |Gene Synonym(s)
||
''ECK2755, b2760, JW2730'', ygcL<ref name='LIB:Riley_2006'/>
|-
!align=left {{table_heading_style}} |Product Desc.
||
predicted protein<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>

Function unknown; baeSR regulon; homologous to human TRRAP protein, phosphatidylinositol kinases and DNA-dependent protein kinases<ref name='LIB:EcoGene'/>
|-
!align=left {{table_heading_style}} |Product Synonyms(s)
||
predicted protein<ref name='LIB:Riley_2006'/>, B2760<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YgcL<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>
|-
!align=left {{table_heading_style}} |Function from GO
||
<GO_nr />
|-
!align=left {{table_heading_style}} |Knock-Out Phenotype
||

|-
!align=left {{table_heading_style}} |Regulation/Expression
||
transcription unit(s): [[:Category:Txn_unit:ygbF|ygbF]]<ref name='LIB:EcoCyc10.6'/>
|-
!align=left {{table_heading_style}} |Regulation/Activity
||
In E. coli K12 transcription of casA is cryptic through silencing by H-NS <ref name='PMID:20132443'/>.
|-
!align=left {{table_heading_style}} |Quick Links
||
[http://ecoliwiki.net/tools/display_dna.php?gene=ygcL&loc=MG1655:2882160..2880652,W3110:2882794..2881286,DH10B:2974702..2973194,BW2952:2766464..2767972 DNA display]    [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2766464&end=2767972&gene=ygcL&aa=mnllidnwipvrprnggkvqiinlqslycsrdqwrlslprddmelaalallvcigqiiapakddvefrhrimnpltedefqqliapwidmfylnhaehpfmqtkgvkandvtpmekllagvsgatncafvnqpgqgealcggctaialfnqanqapgfgggfksglrggtpvttfvrgidlrstvllnvltlprlqkqfpneshtenqptwikpiksnesipassigfvrglfwqpahielcdpigigkcsccgqesnlrytgflkekftftvnglwphphspclvtvkkgeveekflafttsapswtqisrvvvdkiiqnengnrvaavvnqfrniapqsplelimggyrnnqasilerrhdvlmfnqgwqqygnvineivtvglgyktalrkalytfaegfknkdfkgagvsvhetaerhfyrqsellipdvlanvnfsqadeviadlrdklhqlcemlfnqsvapyahhpklistlalaratlykhlrelkpqggpsng Protein display]    [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ygcL+AND+escherichia+coli Pubmed(ygcL)]    [http://trimer.tamu.edu/cgi-bin/textpresso/dev/search?q=ygcL Textpresso(ygcL)]

|- class="tableEdit_footer"
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=bc145ea147f7e36caf09c1bfeed4ee9d.7272.R49b030631f67d&page=7272&pagename={{FULLPAGENAMEE}}&type=1&template=New_Quickview_Table edit table] ||
|}
</protect>
{{Quickview_table_help}}
<protect></protect>
===Notes===
{{BacktoTop}}casA, as the other Cascade genes, is transcribed from a single promoter, which is silenced by H-NS <ref name='PMID:20132443'/>.

<noinclude>

==References==
{{BacktoTop}}

<references/>
</noinclude>

casA:Quickview

2010-03-31T10:58:01Z

Wagner: Table edited by Wagner via TableEdit

{{#css:Suppresslinks.css}}<css>{{:Suppresslinks.css}}</css>
<noinclude>{{TabsTop}}
{{Tab On|Quickview|casA}}{{Tab|Gene|casA}}{{Tab|Gene Product(s)|casA}}{{Tab|Expression|casA}}{{Tab|Evolution|casA}}{{Tab|On One Page|casA}}{{TabsBottom}}
{|
|- style="background-color:white; border:solid 2px #CCFFFF; text-align:center; white-space: nowrap;"
|{{Sub}}[[#References| References]]
|{{Sub}}[[Talk:{{PAGENAMEE}}| Suggestions]]
|}
</noinclude>
<protect>
{{Quickview_table_help}}
{| id="R49b030631f67d" class=" tableEdit New_Quickview_Table"

|-
!align=left {{table_heading_style}} |Standard Name
||
''casA''
|-
!align=left {{table_heading_style}} |Gene Synonym(s)
||
''ECK2755, b2760, JW2730'', ygcL<ref name='LIB:Riley_2006'/>
|-
!align=left {{table_heading_style}} |Product Desc.
||
predicted protein<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>

Function unknown; baeSR regulon; homologous to human TRRAP protein, phosphatidylinositol kinases and DNA-dependent protein kinases<ref name='LIB:EcoGene'/>
|-
!align=left {{table_heading_style}} |Product Synonyms(s)
||
predicted protein<ref name='LIB:Riley_2006'/>, B2760<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YgcL<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>
|-
!align=left {{table_heading_style}} |Function from GO
||
<GO_nr />
|-
!align=left {{table_heading_style}} |Knock-Out Phenotype
||

|-
!align=left {{table_heading_style}} |Regulation/Expression
||
transcription unit(s): [[:Category:Txn_unit:ygbF|ygbF]]<ref name='LIB:EcoCyc10.6'/>
|-
!align=left {{table_heading_style}} |Regulation/Activity
||
In E. coli K12 transcription of casA is cryptic through silencing by H-NS .
|-
!align=left {{table_heading_style}} |Quick Links
||
[http://ecoliwiki.net/tools/display_dna.php?gene=ygcL&loc=MG1655:2882160..2880652,W3110:2882794..2881286,DH10B:2974702..2973194,BW2952:2766464..2767972 DNA display]    [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2766464&end=2767972&gene=ygcL&aa=mnllidnwipvrprnggkvqiinlqslycsrdqwrlslprddmelaalallvcigqiiapakddvefrhrimnpltedefqqliapwidmfylnhaehpfmqtkgvkandvtpmekllagvsgatncafvnqpgqgealcggctaialfnqanqapgfgggfksglrggtpvttfvrgidlrstvllnvltlprlqkqfpneshtenqptwikpiksnesipassigfvrglfwqpahielcdpigigkcsccgqesnlrytgflkekftftvnglwphphspclvtvkkgeveekflafttsapswtqisrvvvdkiiqnengnrvaavvnqfrniapqsplelimggyrnnqasilerrhdvlmfnqgwqqygnvineivtvglgyktalrkalytfaegfknkdfkgagvsvhetaerhfyrqsellipdvlanvnfsqadeviadlrdklhqlcemlfnqsvapyahhpklistlalaratlykhlrelkpqggpsng Protein display]    [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ygcL+AND+escherichia+coli Pubmed(ygcL)]    [http://trimer.tamu.edu/cgi-bin/textpresso/dev/search?q=ygcL Textpresso(ygcL)]

|- class="tableEdit_footer"
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=bc145ea147f7e36caf09c1bfeed4ee9d.7272.R49b030631f67d&page=7272&pagename={{FULLPAGENAMEE}}&type=1&template=New_Quickview_Table edit table] ||
|}
</protect>
{{Quickview_table_help}}
<protect></protect>
===Notes===
{{BacktoTop}}casA, as the other Cascade genes, is transcribed from a single promoter, which is silenced by H-NS <ref name='PMID:20132443'/>.

<noinclude>

==References==
{{BacktoTop}}

<references/>
</noinclude>

casA:Quickview

2010-03-31T10:55:05Z

Wagner: /* Notes */

{{#css:Suppresslinks.css}}<css>{{:Suppresslinks.css}}</css>
<noinclude>{{TabsTop}}
{{Tab On|Quickview|casA}}{{Tab|Gene|casA}}{{Tab|Gene Product(s)|casA}}{{Tab|Expression|casA}}{{Tab|Evolution|casA}}{{Tab|On One Page|casA}}{{TabsBottom}}
{|
|- style="background-color:white; border:solid 2px #CCFFFF; text-align:center; white-space: nowrap;"
|{{Sub}}[[#References| References]]
|{{Sub}}[[Talk:{{PAGENAMEE}}| Suggestions]]
|}
</noinclude>
<protect>
{{Quickview_table_help}}
{| id="R49b030631f67d" class=" tableEdit New_Quickview_Table"

|-
!align=left {{table_heading_style}} |Standard Name
||
''casA''
|-
!align=left {{table_heading_style}} |Gene Synonym(s)
||
''ECK2755, b2760, JW2730'', ygcL<ref name='LIB:Riley_2006'/>
|-
!align=left {{table_heading_style}} |Product Desc.
||
predicted protein<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>

Function unknown; baeSR regulon; homologous to human TRRAP protein, phosphatidylinositol kinases and DNA-dependent protein kinases<ref name='LIB:EcoGene'/>
|-
!align=left {{table_heading_style}} |Product Synonyms(s)
||
predicted protein<ref name='LIB:Riley_2006'/>, B2760<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YgcL<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>
|-
!align=left {{table_heading_style}} |Function from GO
||
<GO_nr />
|-
!align=left {{table_heading_style}} |Knock-Out Phenotype
||

|-
!align=left {{table_heading_style}} |Regulation/Expression
||
transcription unit(s): [[:Category:Txn_unit:ygbF|ygbF]]<ref name='LIB:EcoCyc10.6'/>
|-
!align=left {{table_heading_style}} |Regulation/Activity
||

|-
!align=left {{table_heading_style}} |Quick Links
||
[http://ecoliwiki.net/tools/display_dna.php?gene=ygcL&loc=MG1655:2882160..2880652,W3110:2882794..2881286,DH10B:2974702..2973194 DNA display]    [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2974702&end=2973194&gene=ygcL&aa=mnllidnwipvrprnggkvqiinlqslycsrdqwrlslprddmelaalallvcigqiiapakddvefrhrimnpltedefqqliapwidmfylnhaehpfmqtkgvkandvtpmekllagvsgatncafvnqpgqgealcggctaialfnqanqapgfgggfksglrggtpvttfvrgidlrstvllnvltlprlqkqfpneshtenqptwikpiksnesipassigfvrglfwqpahielcdpigigkcsccgqesnlrytgflkekftftvnglwphphspclvtvkkgeveekflafttsapswtqisrvvvdkiiqnengnrvaavvnqfrniapqsplelimggyrnnqasilerrhdvlmfnqgwqqygnvineivtvglgyktalrkalytfaegfknkdfkgagvsvhetaerhfyrqsellipdvlanvnfsqadeviadlrdklhqlcemlfnqsvapyahhpklistlalaratlykhlrelkpqggpsng Protein display]    [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ygcL+AND+escherichia+coli Pubmed(ygcL)]    [http://trimer.tamu.edu/cgi-bin/textpresso/dev/search?q=ygcL Textpresso(ygcL)]

|- class="tableEdit_footer"
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=bc145ea147f7e36caf09c1bfeed4ee9d.7272.R49b030631f67d&page=7272&pagename={{FULLPAGENAMEE}}&type=1&template=New_Quickview_Table edit table] ||
|}
</protect>
{{Quickview_table_help}}
<protect></protect>
===Notes===
{{BacktoTop}}casA, as the other Cascade genes, is transcribed from a single promoter, which is silenced by H-NS <ref name='PMID:20132443'/>.

<noinclude>

==References==
{{BacktoTop}}

<references/>
</noinclude>

casA:Quickview

2010-03-31T10:53:08Z

Wagner: /* Notes */

{{#css:Suppresslinks.css}}<css>{{:Suppresslinks.css}}</css>
<noinclude>{{TabsTop}}
{{Tab On|Quickview|casA}}{{Tab|Gene|casA}}{{Tab|Gene Product(s)|casA}}{{Tab|Expression|casA}}{{Tab|Evolution|casA}}{{Tab|On One Page|casA}}{{TabsBottom}}
{|
|- style="background-color:white; border:solid 2px #CCFFFF; text-align:center; white-space: nowrap;"
|{{Sub}}[[#References| References]]
|{{Sub}}[[Talk:{{PAGENAMEE}}| Suggestions]]
|}
</noinclude>
<protect>
{{Quickview_table_help}}
{| id="R49b030631f67d" class=" tableEdit New_Quickview_Table"

|-
!align=left {{table_heading_style}} |Standard Name
||
''casA''
|-
!align=left {{table_heading_style}} |Gene Synonym(s)
||
''ECK2755, b2760, JW2730'', ygcL<ref name='LIB:Riley_2006'/>
|-
!align=left {{table_heading_style}} |Product Desc.
||
predicted protein<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>

Function unknown; baeSR regulon; homologous to human TRRAP protein, phosphatidylinositol kinases and DNA-dependent protein kinases<ref name='LIB:EcoGene'/>
|-
!align=left {{table_heading_style}} |Product Synonyms(s)
||
predicted protein<ref name='LIB:Riley_2006'/>, B2760<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YgcL<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>
|-
!align=left {{table_heading_style}} |Function from GO
||
<GO_nr />
|-
!align=left {{table_heading_style}} |Knock-Out Phenotype
||

|-
!align=left {{table_heading_style}} |Regulation/Expression
||
transcription unit(s): [[:Category:Txn_unit:ygbF|ygbF]]<ref name='LIB:EcoCyc10.6'/>
|-
!align=left {{table_heading_style}} |Regulation/Activity
||

|-
!align=left {{table_heading_style}} |Quick Links
||
[http://ecoliwiki.net/tools/display_dna.php?gene=ygcL&loc=MG1655:2882160..2880652,W3110:2882794..2881286,DH10B:2974702..2973194 DNA display]    [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2974702&end=2973194&gene=ygcL&aa=mnllidnwipvrprnggkvqiinlqslycsrdqwrlslprddmelaalallvcigqiiapakddvefrhrimnpltedefqqliapwidmfylnhaehpfmqtkgvkandvtpmekllagvsgatncafvnqpgqgealcggctaialfnqanqapgfgggfksglrggtpvttfvrgidlrstvllnvltlprlqkqfpneshtenqptwikpiksnesipassigfvrglfwqpahielcdpigigkcsccgqesnlrytgflkekftftvnglwphphspclvtvkkgeveekflafttsapswtqisrvvvdkiiqnengnrvaavvnqfrniapqsplelimggyrnnqasilerrhdvlmfnqgwqqygnvineivtvglgyktalrkalytfaegfknkdfkgagvsvhetaerhfyrqsellipdvlanvnfsqadeviadlrdklhqlcemlfnqsvapyahhpklistlalaratlykhlrelkpqggpsng Protein display]    [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ygcL+AND+escherichia+coli Pubmed(ygcL)]    [http://trimer.tamu.edu/cgi-bin/textpresso/dev/search?q=ygcL Textpresso(ygcL)]

|- class="tableEdit_footer"
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=bc145ea147f7e36caf09c1bfeed4ee9d.7272.R49b030631f67d&page=7272&pagename={{FULLPAGENAMEE}}&type=1&template=New_Quickview_Table edit table] ||
|}
</protect>
{{Quickview_table_help}}
<protect></protect>
===Notes===
{{BacktoTop}}casA, as the other Cascade genes, is transcribed from a single promoter, which is silenced by H-NS.

<noinclude>

==References==
{{BacktoTop}}

<references/>
</noinclude>