EcoliWiki - User contributions [en]

User:Uetz

2013-05-08T17:05:06Z

Uetz: Table edited by Uetz via TableEdit

Click "edit table" in the last row to add information to the table. Click [[Help:Adding_your_information|here]] to find out how to add more information to your user page.



{| id="C4da5b67cd8db9" class=" tableEdit User_info_table"

|-
!align=left |Name (Last, First)
||
Uetz, Peter
|-
!align=left |Organization
||
Virginia Commonwealth University
|-
!align=left |Position
||
Associate Professor
|-
!align=left |Address
||

|-
!align=left |Contact Info
||
*email: peter@uetz.us
|-
!align=left |Website(s)
||
http://www.vcu.edu/csbc/uetz/uetz2.html
|-
!align=left |Interests
||
protein interaction networks, protein function, proteins of unknown function, protein domains
|-
!align=left |Genes
||

|-
!align=left |Lab members
||

|- class="tableEdit_footer"
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=63ce1649aab8b3180235b0af7618f667.177618.C4da5b67cd8db9&page=177618&pagename={{FULLPAGENAMEE}}&type=1&template=User_info_table edit table] ||
|}


==References==
{{RefHelp}}
<references/>

intD:Gene

2012-09-28T17:47:12Z

Uetz: Table edited by Uetz via TableEdit

{{#css:Suppresslinks.css}}<css>{{:Suppresslinks.css}}</css>
<noinclude>{{TabsTop}}
{{Tab|Quickview|intD}}{{Tab On|Gene|intD}}{{Tab|Gene Product(s)|intD}}{{Tab|Expression|intD}}{{Tab|Evolution|intD}}{{Tab|On One Page|intD}}{{TabsBottom}}
{|
|- style="background-color:white; border:solid 2px #CCFFFF; text-align:center; white-space: nowrap;"
|{{Sub}}[[#Nomenclature |Nomenclature]]
|{{Sub}}[[#Location(s) and DNA Sequence|Location(s) and DNA Sequence]]
|{{Sub}}[[#Sequence Features|Sequence Features]]
|{{Sub}}[[#Alleles and Phenotypes |Alleles and Phenotypes]]
|{{Sub}}[[#Genetic Interactions | Genetic Interactions]]
|{{Sub}}[[#Genetic Resources |Genetic Resources]]
|{{Sub}}[[#Accessions in Other Databases |Accessions]]
|{{Sub}}[[#Links |Links]]
|{{Sub}}[[#References |References]]
|{{Sub}}[[Talk:{{PAGENAMEE}}| Suggestions]]
|}
</noinclude><protect>
==Nomenclature==
{{BacktoTop}}

{{Gene_nomenclature_help}}
{| id="O46a9b30c9303a" class=" tableEdit Gene_nomenclature_table"

|-
!align=left {{table_heading_style}} |Standard name
||
''intD''
|-
!align=left {{table_heading_style}} |Mnemonic
||
Integrase
|-
!align=left {{table_heading_style}} |Synonyms
||
''ECK0530, b0537, JW0525, int''<ref name='LIB:Riley_2006'/>, int''

|- class="tableEdit_footer"
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.11637.O46a9b30c9303a&page=11637&pagename={{FULLPAGENAMEE}}&type=1&template=Gene_nomenclature_table edit table] ||
|}


</protect>
===Notes===

==Location(s) and DNA Sequence==
{{BacktoTop}}
<protect>

{{Gene_location_help}}
{| id="O46a9b30d16991" class=" tableEdit Gene_location_table"
|- {{table_heading_style}}
!|Strain!!Map location!!Genome coordinates!!Genome browsers!!Sequence links
|-
|
MG1655
|
12.16 minutes 
|
MG1655: 565201..564038 <gbrowseImage>
name=NC_000913:564038..565201
source=MG1655
preset=GeneLocation
</gbrowseImage>

|
*[http://biocyc.org/ECOLI/NEW-IMAGE?type=LOCUS-POSITION&chromosome=COLI-K12&object=EG10507 EcoCyc]
{{GBrowseLink|MG1655|NC_000913|563038|566201|GBrowse(MG1655)}}

|
{{GBrowseFastaLink|MG1655|NC_000913|564038|565201|FASTA Dump}}
*[http://biocyc.org/ECOLI/sequence?object=EG10507 EcoCyc Sequence Dump]
|-
|
[[REL606]]
|

|
NC_012967: 538092..536929 <gbrowseImage>
name=NC_012967:536929..538092
source=REL606
preset=GeneLocation
</gbrowseImage>

|
{{GBrowseLink|REL606|NC_012967|536929|538092|GBrowse (REL606)}}
|
{{GBrowseFastaLink|REL606|NC_012967|536929|538092|FASTA Dump}}
|-
|
[[BW2952]]
|

|
NC_012759: 466798..467961 <gbrowseImage>
name=NC_012759:466798..467961
source=BW2952
preset=GeneLocation
</gbrowseImage>

|
{{GBrowseLink|BW2952|NC_012759|466798|467961|GBrowse (BW2952)}}
|
{{GBrowseFastaLink|BW2952|NC_012759|466798|467961|FASTA Dump}}
|-
|
W3110
|
 
|
W3110: 565201..564038 <gbrowseImage>
name=AC_000091:564038..565201
source=W3110
preset=GeneLocation
</gbrowseImage>

|
{{GBrowseLink|W3110|AC_000091|563038|566201|GBrowse(W3110)}}
|
{{GBrowseFastaLink|W3110|AC_000091|564038|565201|FASTA Dump}}
|-
|
[[DH10B]]
|

|
DH10B: 504533..503370 <gbrowseImage>
name=NC_010473:503370..504533
source=DH10B
preset=GeneLocation
</gbrowseImage>

|
{{GBrowseLink|DH10B|NC_010473|501044|506859|GBrowse(DH10B)}}
|
{{GBrowseFastaLink|DH10B|NC_010473|501044|506859|FASTA Dump}}

|- class="tableEdit_footer"
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.11637.O46a9b30d16991&page=11637&pagename={{FULLPAGENAMEE}}&type=0&template=Gene_location_table edit table] || || || ||
|}


</protect>
===Notes===

==Sequence Features==
{{BacktoTop}}

{{Gene_sequence_features_help}}
{| id="Q46a9b30db286f" class=" tableEdit Gene_sequence_features_table"
|- {{table_heading_style}}
!|Feature Type!!Strain!!Genomic Location!!Evidence!!Reference!!Notes

|- class="tableEdit_footer"
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.11637.Q46a9b30db286f&page=11637&pagename={{FULLPAGENAMEE}}&type=0&template=Gene_sequence_features_table edit table] || || || || ||
|}


<protect></protect>
====Notes====

==Alleles and Phenotypes==
{{BacktoTop}}

{{Gene_alleles_help}}
{| {{Prettytable}} id="P46a9b30df24a4" class=" tableEdit Gene_allele_table dataTable"
|- {{table_heading_style}}
!|Allele!!Nt change(s)!!AA change(s)!!Phenotype: Type!!Phenotype: Description!!Reference!!Availability!!Comments
|-
|
ΔintD (Keio:JW0525)
|
deletion
|
deletion
|

|

|
PMID:16738554
|
[http://www.shigen.nig.ac.jp/ecoli/strain/keioCollectionQueryAction.do Shigen]
|

|-
|
[http://asap.ahabs.wisc.edu/asap/feature_info.php?FeatureID=ABE-0001842 intD::Tn5KAN-2] (FB20199)
|
Insertion at nt 524 in Minus orientation
|

|

|

|
PMID:15262929
|
[http://www.genome.wisc.edu/resources/forms/strainrequest.htm E. coli Genome Project:FB20199]
|
does not contain [[pKD46]]

|- class="tableEdit_footer"
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.11637.P46a9b30df24a4&page=11637&pagename={{FULLPAGENAMEE}}&type=&template=Gene_allele_table edit table] || || || || || || ||
|}


<protect></protect>
===Notes===

==Genetic Interactions==
{{BacktoTop}}
<protect>
{{Genetic_interaction_help}}
{| id="K4e04bded21479" class=" tableEdit Genetic_interaction_table dataTable"
|- {{table_heading_style}}
!|Interactor!!Interaction!!Allele!!Score(s)!!Reference(s)!!Accessions!!Notes

|- class="tableEdit_footer"
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=bc145ea147f7e36caf09c1bfeed4ee9d.11637.K4e04bded21479&page=11637&pagename={{FULLPAGENAMEE}}&type=0&template=Genetic_interaction_table edit table] || || || || || ||
|}
</protect>


===Notes===

==Genetic Resources==
{{BacktoTop}}

{{Gene_resources_help}}
{| id="J46a9b30e9a1a8" class=" tableEdit Gene_resource_table"
|- {{table_heading_style}}
!|Resource!!Resource Type!!Source!!Notes/Reference
|-
|
JW0525
|
Plasmid clone
|
[http://www.shigen.nig.ac.jp/ecoli/strain/askaCloneQueryAction.do?strainTypeId=9 Shigen]
|
PMID:16769691

Status:Clone OK

Primer 1:GCCTCACTCTTCCGCAGAAATGA

Primer 2:CCCGCCTTCTTTATATCCTCCAT
|-
|
[[:Category:Kohara_Phage:2C4|2C4]]
|
Kohara Phage
|
[http://ecoli.aist-nara.ac.jp/GB6/kohara_info.jsp?fword=158 Genobase]
|
PMID:3038334
|-
|
[[purK:Gene|purK79::Tn10]]
|
Linked marker
|
CAG12171 = [http://cgsc2.biology.yale.edu/Strain.php?ID=39380 CGSC7342]<ref name='LIB:cgsc'/>
|
est. P1 cotransduction: 66% <ref name='LIB:Nichols_linked_Tn'/> 
Synonyms:purE79::Tn10
|-
|
[[dsbG:Gene|dsbG601::Tn10]]
|
Linked marker
|
CAG12149 = [http://cgsc2.biology.yale.edu/Strain.php?ID=39387 CGSC7346]<ref name='LIB:cgsc'/>
|
est. P1 cotransduction: 1% <ref name='LIB:Nichols_linked_Tn'/> 
Synonyms:zbd-601::Tn10, zbe-601::Tn10

|- class="tableEdit_footer"
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.11637.J46a9b30e9a1a8&page=11637&pagename={{FULLPAGENAMEE}}&type=&template=Gene_resource_table edit table] || || ||
|}


<protect></protect>
===Notes===

==Accessions in Other Databases==
{{BacktoTop}}

{{Gene_accessions_help}}
{| id="S46a9b30f2e520" class=" tableEdit Gene_accessions_table"
|- {{table_heading_style}}
!|Database!!Accession!!Notes
|-
|
[http://ecocyc.org EcoCyc] ([[EcoCyc|EcoliWiki Page]])
|
[http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10507 ECOCYC:EG10507]
|
Escherichia coli str. K-12 substr. MG1655
|-
|
[http://ecogene.org EcoGene] ([[EcoGene|EcoliWiki Page]])
|
[http://ecogene.org/geneinfo.php?eg_id=EG10507 EcoGene:EG10507]
|
Escherichia coli str. K-12 substr. MG1655
|-
|
[http://www.ncbi.nlm.nih.gov/gene NCBI] ([[NCBI|EcoliWiki Page]])
|
[http://www.ncbi.nlm.nih.gov/gene?term=947162 GeneID:947162]
|
Escherichia coli str. K-12 substr. MG1655

|- class="tableEdit_footer"
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.11637.S46a9b30f2e520&page=11637&pagename={{FULLPAGENAMEE}}&type=0&template=Gene_accessions_table edit table] || ||
|}


<protect></protect>
===Notes===

==Links==
{{BacktoTop}}


{| id="F46a6d07d0070d" class=" tableEdit Links_table"
|- {{table_heading_style}}
!|Name!!URL!!Comments

|- class="tableEdit_footer"
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.11637.F46a6d07d0070d&page=11637&pagename={{FULLPAGENAMEE}}&type=0&template=Links_table edit table] || ||
|}


<noinclude><protect>
==References==
{{BacktoTop}}
{{RefHelp}}
<references />
__NOTOC__
===Categories===
[[Category:Gene List:MG1655]]
[[Category:Gene List:W3110]]
[[Category:Genes in the Keio knockout collection]]
[[Category:Genes in the ASKA clone collection]]
[[Category:Gene List:DLP12 prophage]]
[[Category:int genes]][[Category:Gene_List:DH10B]][[Category:Gene_List:REL606]]
[[Category:Gene_List:BW2952]]

PMID:17667950

2012-09-28T17:46:09Z

Uetz: Fill PMID: Page!

{{RightTOC}}


{| id="D5065e26100330" class=" tableEdit PMID_info_table"

|-
!align=left |Citation
||
'''Rajagopala, SV, Titz, B, Goll, J, Parrish, JR, Wohlbold, K, McKevitt, MT, Palzkill, T, Mori, H, Finley, RL and Uetz, P''' (2007) The protein network of bacterial motility.''Mol. Syst. Biol.'' '''3''':128
|-
!align=left |Abstract
||
Motility is achieved in most bacterial species by the flagellar apparatus. It consists of dozens of different proteins with thousands of individual subunits. The published literature about bacterial chemotaxis and flagella documented 51 protein-protein interactions (PPIs) so far. We have screened whole genome two-hybrid arrays of Treponema pallidum and Campylobacter jejuni for PPIs involving known flagellar proteins and recovered 176 and 140 high-confidence interactions involving 110 and 133 proteins, respectively. To explore the biological relevance of these interactions, we tested an Escherichia coli gene deletion array for motility defects (using swarming assays) and found 159 gene deletion strains to have reduced or no motility. Comparing our interaction data with motility phenotypes from E. coli, Bacillus subtilis, and Helicobacter pylori, we found 23 hitherto uncharacterized proteins involved in motility. Integration of phylogenetic information with our interaction and phenotyping data reveals a conserved core of motility proteins, which appear to have recruited many additional species-specific components over time. Our interaction data also predict 18,110 interactions for 64 flagellated bacteria.
|-
!align=left |Links
||
[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=17667950 PubMed]
Online version:[http://dx.doi.org/10.1038/msb4100166 10.1038/msb4100166]
|-
!align=left |Keywords
||
Bacillus subtilis; Bacterial Physiological Phenomena; Bacterial Proteins; Escherichia coli; Flagella; Genes, Bacterial; Helicobacter pylori; Movement; Protein Binding

|- class="tableEdit_footer"
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=d41d8cd98f00b204e9800998ecf8427e.182681.D5065e26100330&page=182681&pagename={{FULLPAGENAMEE}}&type=1&template=PMID_info_table edit table] ||
|}


==Significance {{HelpIcon|Help:Literature}} ==
{{LitSignificance}}

== Useful Materials and Methods {{HelpIcon|Help:Literature}}==
{{LitMaterials}}

==Annotations {{HelpIcon|Help:Literature}}==
<protect>

{| id="S5065e2616b2df" class=" tableEdit GO_table_reference dataTable"
|- {{table heading style}}
!|Gene product!!Qualifier!!GO ID!!GO term name!!Evidence Code!!with/from!!Aspect!!Notes!!Status

|- class="tableEdit_footer"
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=d41d8cd98f00b204e9800998ecf8427e.182681.S5065e2616b2df&page=182681&pagename={{FULLPAGENAMEE}}&type=0&template=GO_table_reference edit table] || || || || || || || ||
|}
</protect>

==EcoliWiki Links {{HelpIcon|Help:Literature}} ==
{{LitLinks}}

==See also==

==References==
{{RefHelp}}
<references/>

PMID:17667950

2012-09-28T17:46:08Z

Uetz: New PMID: Page!

intD:Gene

2012-09-28T17:45:49Z

Uetz: Table edited by Uetz via TableEdit

{{#css:Suppresslinks.css}}<css>{{:Suppresslinks.css}}</css>
<noinclude>{{TabsTop}}
{{Tab|Quickview|intD}}{{Tab On|Gene|intD}}{{Tab|Gene Product(s)|intD}}{{Tab|Expression|intD}}{{Tab|Evolution|intD}}{{Tab|On One Page|intD}}{{TabsBottom}}
{|
|- style="background-color:white; border:solid 2px #CCFFFF; text-align:center; white-space: nowrap;"
|{{Sub}}[[#Nomenclature |Nomenclature]]
|{{Sub}}[[#Location(s) and DNA Sequence|Location(s) and DNA Sequence]]
|{{Sub}}[[#Sequence Features|Sequence Features]]
|{{Sub}}[[#Alleles and Phenotypes |Alleles and Phenotypes]]
|{{Sub}}[[#Genetic Interactions | Genetic Interactions]]
|{{Sub}}[[#Genetic Resources |Genetic Resources]]
|{{Sub}}[[#Accessions in Other Databases |Accessions]]
|{{Sub}}[[#Links |Links]]
|{{Sub}}[[#References |References]]
|{{Sub}}[[Talk:{{PAGENAMEE}}| Suggestions]]
|}
</noinclude><protect>
==Nomenclature==
{{BacktoTop}}

{{Gene_nomenclature_help}}
{| id="O46a9b30c9303a" class=" tableEdit Gene_nomenclature_table"

|-
!align=left {{table_heading_style}} |Standard name
||
''intD''
|-
!align=left {{table_heading_style}} |Mnemonic
||
Integrase
|-
!align=left {{table_heading_style}} |Synonyms
||
''ECK0530, b0537, JW0525, int''<ref name='LIB:Riley_2006'/>, int''

|- class="tableEdit_footer"
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.11637.O46a9b30c9303a&page=11637&pagename={{FULLPAGENAMEE}}&type=1&template=Gene_nomenclature_table edit table] ||
|}


</protect>
===Notes===

==Location(s) and DNA Sequence==
{{BacktoTop}}
<protect>

{{Gene_location_help}}
{| id="O46a9b30d16991" class=" tableEdit Gene_location_table"
|- {{table_heading_style}}
!|Strain!!Map location!!Genome coordinates!!Genome browsers!!Sequence links
|-
|
MG1655
|
12.16 minutes 
|
MG1655: 565201..564038 <gbrowseImage>
name=NC_000913:564038..565201
source=MG1655
preset=GeneLocation
</gbrowseImage>

|
*[http://biocyc.org/ECOLI/NEW-IMAGE?type=LOCUS-POSITION&chromosome=COLI-K12&object=EG10507 EcoCyc]
{{GBrowseLink|MG1655|NC_000913|563038|566201|GBrowse(MG1655)}}

|
{{GBrowseFastaLink|MG1655|NC_000913|564038|565201|FASTA Dump}}
*[http://biocyc.org/ECOLI/sequence?object=EG10507 EcoCyc Sequence Dump]
|-
|
[[REL606]]
|

|
NC_012967: 538092..536929 <gbrowseImage>
name=NC_012967:536929..538092
source=REL606
preset=GeneLocation
</gbrowseImage>

|
{{GBrowseLink|REL606|NC_012967|536929|538092|GBrowse (REL606)}}
|
{{GBrowseFastaLink|REL606|NC_012967|536929|538092|FASTA Dump}}
|-
|
[[BW2952]]
|

|
NC_012759: 466798..467961 <gbrowseImage>
name=NC_012759:466798..467961
source=BW2952
preset=GeneLocation
</gbrowseImage>

|
{{GBrowseLink|BW2952|NC_012759|466798|467961|GBrowse (BW2952)}}
|
{{GBrowseFastaLink|BW2952|NC_012759|466798|467961|FASTA Dump}}
|-
|
W3110
|
 
|
W3110: 565201..564038 <gbrowseImage>
name=AC_000091:564038..565201
source=W3110
preset=GeneLocation
</gbrowseImage>

|
{{GBrowseLink|W3110|AC_000091|563038|566201|GBrowse(W3110)}}
|
{{GBrowseFastaLink|W3110|AC_000091|564038|565201|FASTA Dump}}
|-
|
[[DH10B]]
|

|
DH10B: 504533..503370 <gbrowseImage>
name=NC_010473:503370..504533
source=DH10B
preset=GeneLocation
</gbrowseImage>

|
{{GBrowseLink|DH10B|NC_010473|501044|506859|GBrowse(DH10B)}}
|
{{GBrowseFastaLink|DH10B|NC_010473|501044|506859|FASTA Dump}}

|- class="tableEdit_footer"
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.11637.O46a9b30d16991&page=11637&pagename={{FULLPAGENAMEE}}&type=0&template=Gene_location_table edit table] || || || ||
|}


</protect>
===Notes===

==Sequence Features==
{{BacktoTop}}

{{Gene_sequence_features_help}}
{| id="Q46a9b30db286f" class=" tableEdit Gene_sequence_features_table"
|- {{table_heading_style}}
!|Feature Type!!Strain!!Genomic Location!!Evidence!!Reference!!Notes

|- class="tableEdit_footer"
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.11637.Q46a9b30db286f&page=11637&pagename={{FULLPAGENAMEE}}&type=0&template=Gene_sequence_features_table edit table] || || || || ||
|}


<protect></protect>
====Notes====

==Alleles and Phenotypes==
{{BacktoTop}}

{{Gene_alleles_help}}
{| {{Prettytable}} id="P46a9b30df24a4" class=" tableEdit Gene_allele_table dataTable"
|- {{table_heading_style}}
!|Allele!!Nt change(s)!!AA change(s)!!Phenotype: Type!!Phenotype: Description!!Reference!!Availability!!Comments
|-
|
ΔintD (Keio:JW0525)
|
deletion
|
deletion
|

|

|
PMID:16738554
|
[http://www.shigen.nig.ac.jp/ecoli/strain/keioCollectionQueryAction.do Shigen]
|

|-
|
[http://asap.ahabs.wisc.edu/asap/feature_info.php?FeatureID=ABE-0001842 intD::Tn5KAN-2] (FB20199)
|
Insertion at nt 524 in Minus orientation
|

|

|

|
PMID:15262929
|
[http://www.genome.wisc.edu/resources/forms/strainrequest.htm E. coli Genome Project:FB20199]
|
does not contain [[pKD46]]
|-
|

|

|

|

|

|
PMID:17667950
|

|

|- class="tableEdit_footer"
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.11637.P46a9b30df24a4&page=11637&pagename={{FULLPAGENAMEE}}&type=&template=Gene_allele_table edit table] || || || || || || ||
|}


<protect></protect>
===Notes===

==Genetic Interactions==
{{BacktoTop}}
<protect>
{{Genetic_interaction_help}}
{| id="K4e04bded21479" class=" tableEdit Genetic_interaction_table dataTable"
|- {{table_heading_style}}
!|Interactor!!Interaction!!Allele!!Score(s)!!Reference(s)!!Accessions!!Notes

|- class="tableEdit_footer"
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=bc145ea147f7e36caf09c1bfeed4ee9d.11637.K4e04bded21479&page=11637&pagename={{FULLPAGENAMEE}}&type=0&template=Genetic_interaction_table edit table] || || || || || ||
|}
</protect>


===Notes===

==Genetic Resources==
{{BacktoTop}}

{{Gene_resources_help}}
{| id="J46a9b30e9a1a8" class=" tableEdit Gene_resource_table"
|- {{table_heading_style}}
!|Resource!!Resource Type!!Source!!Notes/Reference
|-
|
JW0525
|
Plasmid clone
|
[http://www.shigen.nig.ac.jp/ecoli/strain/askaCloneQueryAction.do?strainTypeId=9 Shigen]
|
PMID:16769691

Status:Clone OK

Primer 1:GCCTCACTCTTCCGCAGAAATGA

Primer 2:CCCGCCTTCTTTATATCCTCCAT
|-
|
[[:Category:Kohara_Phage:2C4|2C4]]
|
Kohara Phage
|
[http://ecoli.aist-nara.ac.jp/GB6/kohara_info.jsp?fword=158 Genobase]
|
PMID:3038334
|-
|
[[purK:Gene|purK79::Tn10]]
|
Linked marker
|
CAG12171 = [http://cgsc2.biology.yale.edu/Strain.php?ID=39380 CGSC7342]<ref name='LIB:cgsc'/>
|
est. P1 cotransduction: 66% <ref name='LIB:Nichols_linked_Tn'/> 
Synonyms:purE79::Tn10
|-
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[[dsbG:Gene|dsbG601::Tn10]]
|
Linked marker
|
CAG12149 = [http://cgsc2.biology.yale.edu/Strain.php?ID=39387 CGSC7346]<ref name='LIB:cgsc'/>
|
est. P1 cotransduction: 1% <ref name='LIB:Nichols_linked_Tn'/> 
Synonyms:zbd-601::Tn10, zbe-601::Tn10

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<protect></protect>
===Notes===

==Accessions in Other Databases==
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{{Gene_accessions_help}}
{| id="S46a9b30f2e520" class=" tableEdit Gene_accessions_table"
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!|Database!!Accession!!Notes
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[http://ecocyc.org EcoCyc] ([[EcoCyc|EcoliWiki Page]])
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[http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10507 ECOCYC:EG10507]
|
Escherichia coli str. K-12 substr. MG1655
|-
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[http://ecogene.org EcoGene] ([[EcoGene|EcoliWiki Page]])
|
[http://ecogene.org/geneinfo.php?eg_id=EG10507 EcoGene:EG10507]
|
Escherichia coli str. K-12 substr. MG1655
|-
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[http://www.ncbi.nlm.nih.gov/gene NCBI] ([[NCBI|EcoliWiki Page]])
|
[http://www.ncbi.nlm.nih.gov/gene?term=947162 GeneID:947162]
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Escherichia coli str. K-12 substr. MG1655

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===Notes===

==Links==
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{| id="F46a6d07d0070d" class=" tableEdit Links_table"
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!|Name!!URL!!Comments

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<noinclude><protect>
==References==
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{{RefHelp}}
<references />
__NOTOC__
===Categories===
[[Category:Gene List:MG1655]]
[[Category:Gene List:W3110]]
[[Category:Genes in the Keio knockout collection]]
[[Category:Genes in the ASKA clone collection]]
[[Category:Gene List:DLP12 prophage]]
[[Category:int genes]][[Category:Gene_List:DH10B]][[Category:Gene_List:REL606]]
[[Category:Gene_List:BW2952]]